846 resultados para generalized linear models


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We propose a simple method of constructing quasi-likelihood functions for dependent data based on conditional-mean-variance relationships, and apply the method to estimating the fractal dimension from box-counting data. Simulation studies were carried out to compare this method with the traditional methods. We also applied this technique to real data from fishing grounds in the Gulf of Carpentaria, Australia

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The approach of generalized estimating equations (GEE) is based on the framework of generalized linear models but allows for specification of a working matrix for modeling within-subject correlations. The variance is often assumed to be a known function of the mean. This article investigates the impacts of misspecifying the variance function on estimators of the mean parameters for quantitative responses. Our numerical studies indicate that (1) correct specification of the variance function can improve the estimation efficiency even if the correlation structure is misspecified; (2) misspecification of the variance function impacts much more on estimators for within-cluster covariates than for cluster-level covariates; and (3) if the variance function is misspecified, correct choice of the correlation structure may not necessarily improve estimation efficiency. We illustrate impacts of different variance functions using a real data set from cow growth.

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This article develops a method for analysis of growth data with multiple recaptures when the initial ages for all individuals are unknown. The existing approaches either impute the initial ages or model them as random effects. Assumptions about the initial age are not verifiable because all the initial ages are unknown. We present an alternative approach that treats all the lengths including the length at first capture as correlated repeated measures for each individual. Optimal estimating equations are developed using the generalized estimating equations approach that only requires the first two moment assumptions. Explicit expressions for estimation of both mean growth parameters and variance components are given to minimize the computational complexity. Simulation studies indicate that the proposed method works well. Two real data sets are analyzed for illustration, one from whelks (Dicathais aegaota) and the other from southern rock lobster (Jasus edwardsii) in South Australia.

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Quasi-likelihood (QL) methods are often used to account for overdispersion in categorical data. This paper proposes a new way of constructing a QL function that stems from the conditional mean-variance relationship. Unlike traditional QL approaches to categorical data, this QL function is, in general, not a scaled version of the ordinary log-likelihood function. A simulation study is carried out to examine the performance of the proposed QL method. Fish mortality data from quantal response experiments are used for illustration.

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The Northern Demersal Scalefish Fishery has historically comprised a small fleet (≤10 vessels year−1) operating over a relatively large area off the northwest coast of Australia. This multispecies fishery primarily harvests two species of snapper: goldband snapper, Pristipomoides multidens and red emperor, Lutjanus sebae. A key input to age-structured assessments of these stocks has been the annual time-series of the catch rate. We used an approach that combined Generalized Linear Models, spatio-temporal imputation, and computer-intensive methods to standardize the fishery catch rates and report uncertainty in the indices. These analyses, which represent one of the first attempts to standardize fish trap catch rates, were also augmented to gain additional insights into the effects of targeting, historical effort creep, and spatio-temporal resolution of catch and effort data on trap fishery dynamics. Results from monthly reported catches (i.e. 1993 on) were compared with those reported daily from more recently (i.e. 2008 on) enhanced catch and effort logbooks. Model effects of catches of one species on the catch rates of another became more conspicuous when the daily data were analysed and produced estimates with greater precision. The rate of putative effort creep estimated for standardized catch rates was much lower than estimated for nominal catch rates. These results therefore demonstrate how important additional insights into fishery and fish population dynamics can be elucidated from such “pre-assessment” analyses.

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Modeling the distributions of species, especially of invasive species in non-native ranges, involves multiple challenges. Here, we developed some novel approaches to species distribution modeling aimed at reducing the influences of such challenges and improving the realism of projections. We estimated species-environment relationships with four modeling methods run with multiple scenarios of (1) sources of occurrences and geographically isolated background ranges for absences, (2) approaches to drawing background (absence) points, and (3) alternate sets of predictor variables. We further tested various quantitative metrics of model evaluation against biological insight. Model projections were very sensitive to the choice of training dataset. Model accuracy was much improved by using a global dataset for model training, rather than restricting data input to the species’ native range. AUC score was a poor metric for model evaluation and, if used alone, was not a useful criterion for assessing model performance. Projections away from the sampled space (i.e. into areas of potential future invasion) were very different depending on the modeling methods used, raising questions about the reliability of ensemble projections. Generalized linear models gave very unrealistic projections far away from the training region. Models that efficiently fit the dominant pattern, but exclude highly local patterns in the dataset and capture interactions as they appear in data (e.g. boosted regression trees), improved generalization of the models. Biological knowledge of the species and its distribution was important in refining choices about the best set of projections. A post-hoc test conducted on a new Partenium dataset from Nepal validated excellent predictive performance of our “best” model. We showed that vast stretches of currently uninvaded geographic areas on multiple continents harbor highly suitable habitats for Parthenium hysterophorus L. (Asteraceae; parthenium). However, discrepancies between model predictions and parthenium invasion in Australia indicate successful management for this globally significant weed. This article is protected by copyright. All rights reserved.

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Modeling the distributions of species, especially of invasive species in non-native ranges, involves multiple challenges. Here, we developed some novel approaches to species distribution modeling aimed at reducing the influences of such challenges and improving the realism of projections. We estimated species-environment relationships with four modeling methods run with multiple scenarios of (1) sources of occurrences and geographically isolated background ranges for absences, (2) approaches to drawing background (absence) points, and (3) alternate sets of predictor variables. We further tested various quantitative metrics of model evaluation against biological insight. Model projections were very sensitive to the choice of training dataset. Model accuracy was much improved by using a global dataset for model training, rather than restricting data input to the species’ native range. AUC score was a poor metric for model evaluation and, if used alone, was not a useful criterion for assessing model performance. Projections away from the sampled space (i.e. into areas of potential future invasion) were very different depending on the modeling methods used, raising questions about the reliability of ensemble projections. Generalized linear models gave very unrealistic projections far away from the training region. Models that efficiently fit the dominant pattern, but exclude highly local patterns in the dataset and capture interactions as they appear in data (e.g. boosted regression trees), improved generalization of the models. Biological knowledge of the species and its distribution was important in refining choices about the best set of projections. A post-hoc test conducted on a new Partenium dataset from Nepal validated excellent predictive performance of our “best” model. We showed that vast stretches of currently uninvaded geographic areas on multiple continents harbor highly suitable habitats for Parthenium hysterophorus L. (Asteraceae; parthenium). However, discrepancies between model predictions and parthenium invasion in Australia indicate successful management for this globally significant weed. This article is protected by copyright. All rights reserved.

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Taman tutkielman tarkoituksena oli selvittaa metsikon rakenteen seka hakkuiden vaikutuksia pintakasvillisuuden lajikoostumukseen ja biomassaan Etela-Suomen lehtomaisilla, tuoreilla ja kuivahkoilla kankailla. Aineistona tassa tyossa on 8. valtakunnan metsien inventoinnin yhteydessa vuosina 1985–86 metsaluonnon ja ympariston tilan seurantaa varten perustetuista noin 3 000 pysyvasta koealasta poimittu otos. Pintakasvillisuuden lajisto muuttuu metsikon kehitysvaiheen mukaan. Hakkuu on huomattava hairio, joka aiheuttaa nopeita ja suuria muutoksia pintakasvillisuudessa. Pintakasvillisuutta on tarkasteltu lahinna lajiryhmittain (heinat, ruohot, varvut, sammalet seka jakalat). Kunkin lajiryhman peittavyyden eroavaisuuksia testattiin varianssianalyysilla kun selittavana muuttujana ovat luokittain metsikon ika ja edellisesta hakkuusta kulunut aika. Lajikohtaisia tarkasteluja on sen sijaan tehty kasvillisuuden ordinaatioanalyyseilla. Tassa kaytetty ordinaatiomenetelma on epametrinen moniulotteinen skaalaus (Non-metric multidimensional scaling, NMDS), jonka avulla voidaan tehda paatelmia kasvillisuuden rakenteen ekologisesta vaihtelusta ymparistomuuttujien suhteen. Harvennus- ja avohakkuiden vaikutuksia pintakasvillisuuteen myos mallinnettiin lajiryhmittain kayttaen yleistettyja lineaarisia malleja (Generalized linear models). Lajiryhmien peittavyyksien kehitysta mallinnettiin puuston pohjapinta-alan funktiona. Metsikon ian kasvaessa heinien ja ruohojen osuus pienenee, kun taas varpujen ja sammalten osuus lisaantyy. Harvennushakkuiden vaikutukset ovat lievempia kuin avohakkuiden eivatka ne useimmiten aiheuttaneet tilastollisesti merkittavia muutoksia pintakasvillisuuden peittavyyksissa. Avohakkuu sen sijaan on voimakkaampi ja aiheuttaa merkittavia muutoksia. Heinia ja ruohoja esiintyy hakkuun jalkeen enemman ja vastaavasti sammalet ja varvut taantuvat. Kasvillisuuden kokonaispeittavyys ja biomassa ovat suurimmillaan hakkaamattomissa metsikoissa. Harvennushakkuun jalkeen peittavyys ja biomassa voi kuitenkin hetkellisesti olla suurimmillaan kun harvennuksesta on kulunut muutama vuosi. Yleistetyt lineaariset mallit kuvasivat pintakasvillisuuden kehitysta metsikon pohjapinta-alan funktiona luotettavasti. Malleja voidaan kayttaa myos ennustamaan miten pintakasvillisuus kehittyy avohakkuun jalkeen. Malleja voidaan soveltaa esimerkiksi laskettaessa pintakasvillisuuden sitoman hiilen maaraa eriikaisissa metsissa. Niiden avulla voidaan myos arvioida esimerkiksi avohakkuuta voimaperaisemman energiapuun korjuun vaikutuksia pintakasvillisuuden runsauteen.

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Periglacial processes act on cold, non-glacial regions where the landscape deveploment is mainly controlled by frost activity. Circa 25 percent of Earth's surface can be considered as periglacial. Geographical Information System combined with advanced statistical modeling methods, provides an efficient tool and new theoretical perspective for study of cold environments. The aim of this study was to: 1) model and predict the abundance of periglacial phenomena in subarctic environment with statistical modeling, 2) investigate the most import factors affecting the occurence of these phenomena with hierarchical partitioning, 3) compare two widely used statistical modeling methods: Generalized Linear Models and Generalized Additive Models, 4) study modeling resolution's effect on prediction and 5) study how spatially continous prediction can be obtained from point data. The observational data of this study consist of 369 points that were collected during the summers of 2009 and 2010 at the study area in Kilpisjärvi northern Lapland. The periglacial phenomena of interest were cryoturbations, slope processes, weathering, deflation, nivation and fluvial processes. The features were modeled using Generalized Linear Models (GLM) and Generalized Additive Models (GAM) based on Poisson-errors. The abundance of periglacial features were predicted based on these models to a spatial grid with a resolution of one hectare. The most important environmental factors were examined with hierarchical partitioning. The effect of modeling resolution was investigated with in a small independent study area with a spatial resolution of 0,01 hectare. The models explained 45-70 % of the occurence of periglacial phenomena. When spatial variables were added to the models the amount of explained deviance was considerably higher, which signalled a geographical trend structure. The ability of the models to predict periglacial phenomena were assessed with independent evaluation data. Spearman's correlation varied 0,258 - 0,754 between the observed and predicted values. Based on explained deviance, and the results of hierarchical partitioning, the most important environmental variables were mean altitude, vegetation and mean slope angle. The effect of modeling resolution was clear, too coarse resolution caused a loss of information, while finer resolution brought out more localized variation. The models ability to explain and predict periglacial phenomena in the study area were mostly good and moderate respectively. Differences between modeling methods were small, although the explained deviance was higher with GLM-models than GAMs. In turn, GAMs produced more realistic spatial predictions. The single most important environmental variable controlling the occurence of periglacial phenomena was mean altitude, which had strong correlations with many other explanatory variables. The ongoing global warming will have great impact especially in cold environments on high latitudes, and for this reason, an important research topic in the near future will be the response of periglacial environments to a warming climate.

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Native species' response to the presence of invasive species is context specific. This response cannot be studied in isolation from the prevailing environmental stresses in invaded habitats such as seasonal drought. We investigated the combined effects of an invasive shrub Lantana camara L. (lantana), seasonal rainfall and species' microsite preferences on the growth and survival of 1,105 naturally established seedlings of native trees and shrubs in a seasonally dry tropical forest. Individuals were followed from April 2008 to February 2010, and growth and survival measured in relation to lantana density, seasonality of rainfall and species characteristics in a 50-ha permanent forest plot located in Mudumalai, southern India. We used a mixed effects modelling approach to examine seedling growth and generalized linear models to examine seedling survival. The overall relative height growth rate of established seedlings was found to be very low irrespective of the presence or absence of dense lantana. 22-month growth rate of dry forest species was lower under dense lantana while moist forest species were not affected by the presence of lantana thickets. 4-month growth rates of all species increased with increasing inter-census rainfall. Community results may be influenced by responses of the most abundant species, Catunaregam spinosa, whose growth rates were always lower under dense lantana. Overall seedling survival was high, increased with increasing rainfall and was higher for species with dry forest preference than for species with moist forest preference. The high survival rates of naturally established seedlings combined with their basal sprouting ability in this forest could enable the persistence of woody species in the face of invasive species.

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ENGLISH: Monthly estimates of the abundance of yellowfin tuna by age groups and regions within the eastern Pacific Ocean during 1970-1988 are made, using purse-seine catch rates, length-frequency samples, and results from cohort analysis. The numbers of individuals caught of each age group in each logged purse-seine set are estimated, using the tonnage from that set and length-frequency distribution from the "nearest" length-frequency sample(s). Nearest refers to the closest length frequency sample(s) to the purse-seine set in time, distance, and set type (dolphin associated, floating object associated, skipjack associated, none of these, and some combinations). Catch rates are initially calculated as the estimated number of individuals of the age group caught per hour of searching. Then, to remove the effects of set type and vessel speed, they are standardized, using separate weiznted generalized linear models for each age group. The standardized catch rates at the center of each 2.5 0 quadrangle-month are estimated, using locally-weighted least-squares regressions on latitude, longitude and date, and then combined into larger regions. Catch rates within these regions are converted to numbers of yellowfin, using the mean age composition from cohort analysis. The variances of the abundance estimates within regions are large for 0-, 1-, and 5-year-olds, but small for 1.5- to 4-year-olds, except during periods of low fishing activity. Mean annual catch rate estimates for the entire eastern Pacific Ocean are significantly positively correlated with mean abundance estimates from cohort analysis for age groups ranging from 1.5 to 4 years old. Catch-rate indices of abundance by age are expected to be useful in conjunction with data on reproductive biology to estimate total egg production within regions. The estimates may also be useful in understanding geographic and temporal variations in age-specific availability to purse seiners, as well as age-specific movements. SPANISH: Se calculan estimaciones mensuales de la abundancia del atún aleta amarilla por grupos de edad y regiones en el Océano Pacífico oriental durante 1970-1988, usando tasas de captura cerquera, muestras de frecuencia de talla, y los resultados del análisis de cohortes. Se estima el número de individuos capturados de cada grupo de edad en cada lance cerquero registrado, usando el tonelaje del lance en cuestión y la distribución de frecuencia de talla de la(s) muestra(s) de frecuencia de talla "más cercana/s)," "Más cercana" significa la(s) muestra(s) de frecuencia de talla más parecida(s) al lance cerquero en cuanto a fecha, distancia, y tipo de lance (asociado con delfines, con objeto flotante, con barrilete, con ninguno de éstos, y algunas combinaciones). Se calculan inicialmente las tasas de captura como el número estimado de individuos del grupo de edad capturado por hora de búsqueda. A continuación, para eliminar los efectos del tipo de lance y la velocidad del barco, se estandardizan dichas tasas, usando un modelo lineal generalizado ponderado, para cada grupo por separado. Se estima la tasa de captura estandardizada al centro de cada cuadrángulo de 2.5°-mes, usando regresiones de mínimos cuadrados ponderados localmente por latitud, longitud, y fecha, y entonces combinándolas en regiones mayores. Se convierten las tasas de captura dentro de estas regiones en números de aletas amarillas individuales, usando el número promedio por edad proveniente del análisis de cohortes. Las varianzas de las estimaciones de la abundancia dentro de las regiones son grandes para los peces de O, 1, Y5 años de edad, pero pequeñas para aquellos de entre 1.5 Y4 años de edad, excepto durante períodos de poca actividad pesquera. Las estimaciones de la tasa de captura media anual para todo el Océano Pacífico oriental están correlacionadas positivamente de forma significativa con las estimaciones de la abundancia media del análisis de las cohortes para los grupos de edad de entre 1.5 y 4 años. Se espera que los índices de abundancia por edad basados en las tasas de captura sean útiles, en conjunto con datos de la biología reproductiva, para estimar la producción total de huevos por regiones. Las estimaciones podrían asimismo ser útiles para la comprensión de las variaciones geográficas y temporales de la disponibilidad específica por edad a los barcos cerqueros, y también las migraciones específicas por edad. (PDF contains 35 pages.)

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ENGLISH: Longline hook rates of bigeye and yellowfin tunas in the eastern Pacific Ocean were standardized by maximum depth of fishing, area, and season, using generalized linear models (GLM's). The annual trends of the standardized hook rates differ from the unstandardized, and are more likely to represent the changes in abundance of tunas in the age groups most vulnerable to longliners in the fishing grounds. For both species all of the interactions in the GLM's involving years, depths of fishing, areas, and seasons were significant. This means that the annual trends in hook rates depend on which depths, areas, and seasons are being considered. The overall average hook rates for each were estimated by weighting each 5-degree quadrangle equally and each season by the number of months in it. Since the annual trends in hook rates for each fishing depth category are roughly the same for bigeye, total average annual hook rate estimates are possible with the GLM. For yellowfin, the situation is less clear because of a preponderance of empty cells in the model. The full models explained 55% of the variation in bigeye hook rate and 33% of that of yellowfin. SPANISH: Se estandardizaron las tasas de captura con palangre de atunes patudo y aleta amarilla en el Océano Pacífico oriental por la profunidad máxima de pesca, área, y temporada, usando modelos lineales generalizados (MLG). Las tendencias anuales de las tasas de captura estandardizadas son diferentes a las de las tasas no estandardizadas, y es más que representen los cambios en la abundancia de los atunes en los grupos de edad más vulnerables a los palangreros en las áreas de pesca. Para ambas especies fueron significativas todas las interacciones en los MLG con año, profundidad de pesca, área, y temporada. Esto significa que las tendencias anuales de las tasas de captura dependen de cuál profundidad, área, y temporado se está considerando. Para la estimación de la tasa de captura general media para cada especie se ponderó cada cuadrángulo de 5 grados igualmente y cada temporada por el número de meses que contiene. Ya que las tendencias anuales en las tasas de captura para cada categoría de profundidad de pesca son aproximadamente iguales para el patudo, son posibles estimaciones de la tasa de captura anual media total con el MLG. En el caso del aleta amarilla, la situación es más confusa, debido a una preponderancia de celdas vacías en el modelo. Los modelos completos explican el 55% de la variación de la tasa de captura de patudo y 33% de la del aleta amarilla. (PDF contains 19 pages.)

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Esta tese inclui dois artigos que tiveram por objetivo investigar a relação de estresse no ambiente de trabalho com a prevalência de transtornos mentais comuns (TMC) e a relação de ambos com os níveis de prática de atividade física em militares do Exército Brasileiro. No primeiro artigo, a variável dependente foi TMC e a primeira variável independente foi o estresse no ambiente de trabalho, avaliado sob o modelo esforço-recompensa em desequilíbrio (effort-reward imbalance: ERI). TMC foram avaliados por meio do General Health Questionnaire (GHQ-12). Foram estimadas razões de prevalência (RP) por regressão de Poisson para imprimir robustez aos intervalos de confiança (95%). A prevalência de TMC foi de 33,2% (IC95%:29,1;37,3). O estudo mostrou, após ajuste por idade, educação, renda, estilo de vida, autopercepção de saúde, agravos à saúde autorreferidos e características ocupacionais, que estresse no ambiente de trabalho estava forte e independentemente associado a TMC, exibindo razões de prevalências (RP) que variaram entre os níveis de estresse, oscilando de 1,60 a 2,01. O posto de tenente estava associado a TMC, mesmo após ajuste pelas covariáveis (RP = 2,06; IC95% 1,2 4,1). Os resultados indicaram que excesso de comprometimento é um componente importante do estresse no trabalho. Estes achados foram consistentes com a literatura e contribuem com o conhecimento sobre o estado de saúde mental dos militares das Forças Armadas no Brasil, destacando que o estresse no ambiente de trabalho e que o desempenho das funções ocupacionais, do posto de Tenente, podem significar risco maior para TMC nesse tipo de população. O segundo artigo teve por objetivo investigar a associação de estresse no ambiente de trabalho e TMC com a prática de atividade física habitual entre militares das Forças Armadas. A atividade física (variável dependente) foi estimada por meio do Questionário de Baecke, um dos instrumentos mais utilizados em estudos epidemiológicos sobre atividade física. Estresse no ambiente de trabalho, TMC e posto foram as variáveis independentes, avaliadas conforme descrição mencionada acima. Buscou-se avaliar a associação destas variáveis e com a prática de atividade física no pessoal militar. Para tanto, utilizou-se o método de regressão linear múltipla, via modelos lineares generalizados. Após controlar por características socioeconomicas e demográficas, estresse no ambiente de trabalho, caracterizado por "altos esforços e baixa recompensas", permaneceu associado a mais atividade física ocupacional (b = 0,224 IC95% 0,098; 0,351) e a menos atividade física no lazer (b = -0,198; IC95% -0,384; -0,011). TMC permaneceram associados a menores níveis de atividade física nos esportes/exercícios no lazer (b = -0,184; IC95% -0,321; -0,046). Posto permaneceu associado a maiores níveis de atividade física ocupacional (b = 0,324 IC95% 0,167; 0,481). Até onde se sabe, este foi o primeiro estudo a avaliar a relação de aspectos psicossociais e ocupacionais envolvidos na prática de atividade física em militares no Brasil e no exterior. Os resultados sugerem que o ambiente de trabalho e a saúde mental estão associados à prática de atividade física de militares, que se relaciona com a condição de aptidão física.

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Gênero, raça e transtornos mentais são variáveis importantes a serem consideradas em estudos que avaliam a autopercepção do peso corporal. Se, por um lado, a sociedade contemporânea se depara com um crescimento epidêmico do sobrepeso e da obesidade, por outro os paradigmas corporais construídos socialmente para homens e mulheres têm-se tornado com o passar dos anos mais rigorosos e inatingíveis, sendo relacionados não somente à saúde, mas também ao sucesso pessoal, profissional e afetivo. Desse modo, perceber-se fora desse padrão pode levar ao desenvolvimento de transtornos mentais comuns (TMC). Alguns grupos, entretanto, parecem ser menos vulneráveis a tais padrões como no caso de indivíduos da raça negra. No entanto, poucos estudos nacionais têm investigado essas questões. A presente tese avaliou a incidência de TMC segundo a autopercepção do peso corporal entre funcionários de uma universidade no Rio de Janeiro, assim como a concordância entre a autopercepção do peso corporal e o Índice de Massa Corporal (IMC) segundo raça nessa mesma população. O primeiro estudo avaliou dados da primeira onda de seguimento da coorte do estudo Pró-Saúde analisando através de modelos lineares generalizados os riscos relativos da associação entre o desenvolvimento de TMC e a autopercepção do peso corporal. O segundo avaliou a estrutura de concordância entre a autopercepção do peso corporal e o IMC segundo raça. Os resultados do primeiro artigo evidenciaram associação entre incidência de TMC e perceber-se acima do peso corporal (RR=1,42) no modelo ajustado por sexo. Na análise que avaliou a concordância entre o IMC e a autopercepção do peso corporal não foram observadas diferenças em relação à raça e a concordância variou de moderada a elevada em entre mulheres e homens, respectivamente.Em ambos os sexos, o padrão de concordância fora da diagonal principal indicou que categorias altas e baixas de IMC corresponderam às categorias extremas de percepção corporal. Entre as mulheres, entretanto, a concordância dentro da diagonal principal sugeriu um padrão de concordância possivelmente maior para as categorias extremas de autopercepção de peso e IMC. Não foram evidenciadas diferenças segundo raça, possivelmente, pelo fato das pressões sociais em relação à aquisição de peso ideal serem desenvolvidas, no Brasil, dentro de um contexto multiracial.

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We compared numbers of strikes, proportions of fish that hooked up after strikes, proportions of fish that stayed on hook (retained) after hook up, and numbers of fish caught between circle and J hooks rigged with dead natural fish bait (ballyhoo)and trolled for three oceanic predator species: dolphinfish (Coryphaena hippurus), yellowfin tuna (Thunnus albacares), and wahoo (Acanthocybium solandri). Interactions were compared between circle and J hooks fished on 75 trips by two user groups (charter and recreational fishermen). Hooks were affixed to three species-specific leader types most commonly fished in this region: monofilament (dolphinfish), fluorocarbon (tuna), and wire (wahoo). Numbers of fish caught per trip and three potential mechanisms that might inf luence numbers caught (i.e., number of strikes, proportion of fish hooked, and proportion retained) were modeled with generalized linear models that considered hook type, leader type, species, user (fishing) group, and wave height as main effects. Hook type was a main effect at the catch level; generally, more fish were caught on J hooks than on circle hooks. The effect of hook type on strike rates was equivocal. However, J hooks had a greater proportion of hook-ups than did circle hooks. Finally, the proportion of fish retained once hooked was generally equal between hook types. We found similar results when data from additional species were pooled as a “tuna” group and a “mackerel” group. We conclude that J hooks are more effective than circle hooks at the hook-up level and result in greater numbers of troll-caught dolphinfish, tunas