The phylogeography of trypanosomes from South American alligatorids and African crocodilids is consistent with the geological history of South American river basins and the transoceanic dispersal of Crocodylus at the Miocene

Background: Little is known about the diversity, phylogenetic relationships, and biogeography of trypanosomes infecting non-mammalian hosts. In this study, we investigated the influence of host species and biogeography on shaping the genetic diversity, phylogenetic relationship, and distribution of trypanosomes from South American alligatorids and African crocodilids. Methods: Small Subunit rRNA (SSU rRNA) and glycosomal Glyceraldehyde Phosphate Dehydrogenase (gGAPDH) genes were employed for phylogenetic inferences. Trypanosomes from crocodilians were obtained by haemoculturing. Growth behaviour, morphology, and ultrastructural features complement the molecular description of two new species strongly supported by phylogenetic analyses. Results: The inferred phylogenies disclosed a strongly supported crocodilian-restricted clade comprising three subclades. The subclade T. grayi comprised the African Trypanosoma grayi from Crocodylus niloticus and tsetse flies. The subclade T. ralphi comprised alligatorid trypanosomes represented by Trypanosoma ralphi n. sp. From Melanosuchus niger, Caiman crocodilus and Caiman yacare from Brazilian river basins. T. grayi and T. ralphi were sister subclades. The basal subclade T. terena comprised alligatorid trypanosomes represented by Trypanosoma terena n. sp. from Ca. yacare sharing hosts and basins with the distantly genetic related T. ralphi. This subclade also included the trypanosome from Ca. crocodilus from the Orinoco basin in Venezuela and, unexpectedly, a trypanosome from the African crocodilian Osteolaemus tetraspis. Conclusion: The close relationship between South American and African trypanosomes is consistent with paleontological evidence of recent transoceanic dispersal of Crocodylus at the Miocene/Pliocene boundaries (4–5 mya), and host-switching of trypanosomes throughout the geological configuration of South American hydrographical basins shaping the evolutionary histories of the crocodilians and their trypanosomes.

PROBABILISTIC MODELING OF RAINFALL INDUCED LANDSLIDE HAZARD ASSESSMENT IN SAN JUAN LA LAGUNA, SOLOLÁ, GUATEMALA

The municipality of San Juan La Laguna, Guatemala is home to approximately 5,200 people and located on the western side of the Lake Atitlán caldera. Steep slopes surround all but the eastern side of San Juan. The Lake Atitlán watershed is susceptible to many natural hazards, but most predictable are the landslides that can occur annually with each rainy season, especially during high-intensity events. Hurricane Stan hit Guatemala in October 2005; the resulting flooding and landslides devastated the Atitlán region. Locations of landslide and non-landslide points were obtained from field observations and orthophotos taken following Hurricane Stan. This study used data from multiple attributes, at every landslide and non-landslide point, and applied different multivariate analyses to optimize a model for landslides prediction during high-intensity precipitation events like Hurricane Stan. The attributes considered in this study are: geology, geomorphology, distance to faults and streams, land use, slope, aspect, curvature, plan curvature, profile curvature and topographic wetness index. The attributes were pre-evaluated for their ability to predict landslides using four different attribute evaluators, all available in the open source data mining software Weka: filtered subset, information gain, gain ratio and chi-squared. Three multivariate algorithms (decision tree J48, logistic regression and BayesNet) were optimized for landslide prediction using different attributes. The following statistical parameters were used to evaluate model accuracy: precision, recall, F measure and area under the receiver operating characteristic (ROC) curve. The algorithm BayesNet yielded the most accurate model and was used to build a probability map of landslide initiation points. The probability map developed in this study was also compared to the results of a bivariate landslide susceptibility analysis conducted for the watershed, encompassing Lake Atitlán and San Juan. Landslides from Tropical Storm Agatha 2010 were used to independently validate this study’s multivariate model and the bivariate model. The ultimate aim of this study is to share the methodology and results with municipal contacts from the author's time as a U.S. Peace Corps volunteer, to facilitate more effective future landslide hazard planning and mitigation.

Factors contributing to the attrition of women in the African-American Nutrition for Life study

Background. There is currently a push to increase the number of minorities in cancer clinical trials in an effort to reduce cancer health disparities. Overcoming barriers to clinical trial research for minorities is necessary if we are to achieve the goals of Healthy People 2010. To understand the unexpectedly high rate of attrition in the A NULIFE study, the research team examined the perceived barriers to participation among minority women. The purpose of this study was to determine if either personal or study-related factors influenced healthy pre-menopausal women aged 25-45 years to terminate their participation in the A NULIFE Study. We hypothesized that personal factors were the driving forces for attrition rates in the prevention trial.^ Methods. The target population consisted of eligible women who consented to the A NULIFE study but withdrew prior to being randomized (N= 46), as well as eligible women who completed the informed consent process for the A NULIFE study and withdrew after randomization (N= 42). Examination of attrition rates in this study occurred at a time point when 10 out of 12 participant groups had completed the A NULIFE study. Data involving the 2 groups that were actively engaged in study activities were not used in this analysis. A survey instrument was designed to query the personal and study-related factors that were believed to have contributed to the decision to terminate participation in the A NULIFE study.^ Results. Overall, the highest ranked personal reason that influenced withdrawal from the study was being “too busy” with other obligations. The second highest ranked factor for withdrawal was work obligations. Whereas, more than half of all participants agreed that they were well-informed about the study and considered the study personnel to be approachable, 54% of participants would have been inclined to remain in the study if it were located at a local community center.^ Conclusions. Time commitment was likely a major factor for withdrawal from the A NULIFE study. Future investigators should implement trials within participant communities where possible. Also, focus group settings may provide detailed insight into factors that contribute to the attrition of minorities in cancer clinical trials.^

Syndromic surveillance at a long term shelter for persons displaced by hurricanes Katrina and Rita conducted by the San Antonio Metropolitan Health District

Background. Beginning September 2, 2005, San Antonio area shelters received approximately 12,700 evacuees from Hurricane Katrina. Two weeks later, another 12,000 evacuees from Hurricane Rita arrived. By mid-October, 2005, the in-shelter population was 1,000 people. There was concern regarding the potential for spread of infectious diseases in the shelter. San Antonio Metropolitan Health District (SAMHD) established a syndromic surveillance system with Comprehensive Health Services (CHS) who provided on-site health care. CHS was in daily contact with SAMHD to report symptoms of concern until the shelter closed December 23, 2005. ^ Study type. The objective of this study was to assess the methods used and describe the practical considerations involved in establishing and managing a syndromic surveillance system, as established by the SAMHD in the long-term shelter clinic maintained by CHS for the hurricane evacuees. ^ Methods. Information and descriptive data used in this study was collected from multiple sources, primarily from the San Antonio Metropolitan Health District’s 2006 Report on Syndromic Surveillance of a Long-Term Shelter by Hausler & Rohr-Allegrini. SAMHD and CHS staff ensured that each clinic visit was recorded by date, demographic information, chief complaint and medical disposition. Logs were obtained daily and subsequently entered into a Microsoft Access database and analyzed in Excel. ^ Results. During a nine week period, 4,913 clinic visits were recorded, reviewed and later analyzed. Repeat visits comprised 93.0% of encounters. Chronic illnesses contributed to 21.7% of the visits. Approximately 54.0% were acute care encounters. Of all encounters, 17.3% had infectious disease potential as primarily gastrointestinal and respiratory syndromes. Evacuees accounted for 86% and staff 14% of all visits to the shelter clinic. There were 782 unduplicated individuals who sought services at the clinic, comprised of 63% (496) evacuees and 36% (278) staff members. Staff were more likely to frequent the clinic but for fewer visits each. ^ Conclusion. The presence of health care services and syndromic surveillance provided the opportunity to recognize, document and intervene in any disease outbreak at this long-term shelter. Constant vigilance allowed SAMHD to inform and reassure concerned people living and working in the shelter and living outside the shelter.^

Knowledge and Attitudes of Young People in Nigeria about HIV/AIDS---A systematic review

Background: HIV/AIDS has remained one of Nigeria's biggest health and social issues for decades. People aged between 10 and 24 are the most affected. Research into why this population subset is affected is very pertinent. We therefore conducted a systematic review of the Knowledge and Attitudes of young people in Nigeria about HIV/AIDS to understand where the gaps between knowledge and attitudes can be bridged. ^ Methods: We conducted searches in Medline, PubMed, African Index Medicus, Cumulative Index of Nursing and Allied Health. WHO and UNAIDS documents were also searched. Other journals were hand searched. Searches were for studies between 1986 (when HIV/AIDS was first reported in Nigeria) till date. In addition, data abstraction and quality assessment were done. ^ Results: 279 titles and abstracts were found and 33 articles in full text were appraised critically and 17 articles were selected based on our criteria. This revealed a dearth of well conducted studies in the literature despite the enormity of the HIV/AIDS epidemic. Constructs for Knowledge and attitudes were itemized on two tables for each article based on the Health Belief Model. Even though many of the studies showed high level of knowledge about HIV/AIDS, it did not impact attitudes about the disease. Also fear and anxiety prevented participants from acquiring knowledge. These recurring themes arguably were not limited to any region or area, background or group. ^ Conclusion: There is a need for future research to be culturally sensitive with a focus on attitudes and correction of misconceptions about HIV/AIDS among our youth.^

Formulación de un plan de desarrollo agropecuario y forestal para una comunidad ejidal del municipio de San Fernando, Chiapas, México

El perfil socioeconómico de Chiapas es primordialmente rural, debiendo reconocerse la diversidad de sus actividades agropecuarias y forestales para generar condiciones específicas de desarrollo. Considerando lo anterior, se realizó esta investigación entre mayo de 1998 y diciembre de 1999, como un estudio de caso sobre los aspectos agropecuarios y forestales más relevantes en el ejido Villa Allende, que expresa problemas ejidales característicos de la región. El ejido cuenta con 3.300 hectáreas, 554 ejidatarios y se ubica en el municipio de San Fernando en la Región Central de Chiapas. Se estudiaron las circunstancias de los ejidatarios, conocimiento local y procesos de trabajo agrícola desde una perspectiva de planeación. A partir de ello se generó el plan de desarrollo, el cual es el primero expuesto en el municipio de San Fernando que se dirige al sector ejidal. Su propósito es plasmar una propuesta general en materia agropecuaria y forestal que pueda ser base para la concertación y que permita vislumbrar opciones dirigidas a mejorar la calidad de vida de los habitantes del ejido Villa Allende. Se postulan las siguientes políticas de desarrollo: 1. Fortalecimiento de la producción y la autosuficiencia alimentaria. 2. Impulso al crecimiento económico. 3. Dotación de infraestructura básica. 4. Reordenamiento agropecuario y forestal con criterios sociales, ecológicos y económicos. 5. Promoción de la salud. Con base en las políticas, se enuncian objetivos programas y subprogramas o proyectos.

Juventud, delito y trabajo en San Salvador de Jujuy (Argentina)

El delito juvenil y la inseguridad pública de la Argentina reciente son temas que se han instalado en la agenda tanto política como científica. Algunos autores proponen comprender a estos fenómenos como producto de los procesos de declive institucional que atraviesa actualmente el país, declive que se caracteriza por una serie de transformaciones de las estructuras institucionales de tradición social salarial que afectaron no solo a las economías domésticas sino a un estilo de vida organizado en torno al trabajo, la familia y la educación. En San Salvador de Jujuy, los jóvenes infractores de la ley penal tienen familias cuyas condiciones sociales aparentan derivarse de estos procesos: existencias cercanas a -inmersas en- la pobreza; en algunos casos, necesidades básicas insatisfechas; pertenencia a una escenografía urbana periférica y marginal. Además, estos jóvenes son percibidos y representados mediáticamente con sentidos valorativos cargados de prejuicios y posturas que esencializan el delito, invisibilizando el carácter social y cultural de la problemática. Precisamente, la propuesta de este trabajo radica en analizar y discutir las condiciones de vida de este segmento poblacional, junto con los procesos de exclusión social por los cuales transita de manera fluctuante, con el objetivo de contribuir, a través de un estudio situado, a la comprensión de una problemática cada vez más relevante

Formulación de un plan de desarrollo agropecuario y forestal para una comunidad ejidal del municipio de San Fernando, Chiapas, México

El perfil socioeconómico de Chiapas es primordialmente rural, debiendo reconocerse la diversidad de sus actividades agropecuarias y forestales para generar condiciones específicas de desarrollo. Considerando lo anterior, se realizó esta investigación entre mayo de 1998 y diciembre de 1999, como un estudio de caso sobre los aspectos agropecuarios y forestales más relevantes en el ejido Villa Allende, que expresa problemas ejidales característicos de la región. El ejido cuenta con 3.300 hectáreas, 554 ejidatarios y se ubica en el municipio de San Fernando en la Región Central de Chiapas. Se estudiaron las circunstancias de los ejidatarios, conocimiento local y procesos de trabajo agrícola desde una perspectiva de planeación. A partir de ello se generó el plan de desarrollo, el cual es el primero expuesto en el municipio de San Fernando que se dirige al sector ejidal. Su propósito es plasmar una propuesta general en materia agropecuaria y forestal que pueda ser base para la concertación y que permita vislumbrar opciones dirigidas a mejorar la calidad de vida de los habitantes del ejido Villa Allende. Se postulan las siguientes políticas de desarrollo: 1. Fortalecimiento de la producción y la autosuficiencia alimentaria. 2. Impulso al crecimiento económico. 3. Dotación de infraestructura básica. 4. Reordenamiento agropecuario y forestal con criterios sociales, ecológicos y económicos. 5. Promoción de la salud. Con base en las políticas, se enuncian objetivos programas y subprogramas o proyectos.

Juventud, delito y trabajo en San Salvador de Jujuy (Argentina)

El delito juvenil y la inseguridad pública de la Argentina reciente son temas que se han instalado en la agenda tanto política como científica. Algunos autores proponen comprender a estos fenómenos como producto de los procesos de declive institucional que atraviesa actualmente el país, declive que se caracteriza por una serie de transformaciones de las estructuras institucionales de tradición social salarial que afectaron no solo a las economías domésticas sino a un estilo de vida organizado en torno al trabajo, la familia y la educación. En San Salvador de Jujuy, los jóvenes infractores de la ley penal tienen familias cuyas condiciones sociales aparentan derivarse de estos procesos: existencias cercanas a -inmersas en- la pobreza; en algunos casos, necesidades básicas insatisfechas; pertenencia a una escenografía urbana periférica y marginal. Además, estos jóvenes son percibidos y representados mediáticamente con sentidos valorativos cargados de prejuicios y posturas que esencializan el delito, invisibilizando el carácter social y cultural de la problemática. Precisamente, la propuesta de este trabajo radica en analizar y discutir las condiciones de vida de este segmento poblacional, junto con los procesos de exclusión social por los cuales transita de manera fluctuante, con el objetivo de contribuir, a través de un estudio situado, a la comprensión de una problemática cada vez más relevante

Formulación de un plan de desarrollo agropecuario y forestal para una comunidad ejidal del municipio de San Fernando, Chiapas, México

El perfil socioeconómico de Chiapas es primordialmente rural, debiendo reconocerse la diversidad de sus actividades agropecuarias y forestales para generar condiciones específicas de desarrollo. Considerando lo anterior, se realizó esta investigación entre mayo de 1998 y diciembre de 1999, como un estudio de caso sobre los aspectos agropecuarios y forestales más relevantes en el ejido Villa Allende, que expresa problemas ejidales característicos de la región. El ejido cuenta con 3.300 hectáreas, 554 ejidatarios y se ubica en el municipio de San Fernando en la Región Central de Chiapas. Se estudiaron las circunstancias de los ejidatarios, conocimiento local y procesos de trabajo agrícola desde una perspectiva de planeación. A partir de ello se generó el plan de desarrollo, el cual es el primero expuesto en el municipio de San Fernando que se dirige al sector ejidal. Su propósito es plasmar una propuesta general en materia agropecuaria y forestal que pueda ser base para la concertación y que permita vislumbrar opciones dirigidas a mejorar la calidad de vida de los habitantes del ejido Villa Allende. Se postulan las siguientes políticas de desarrollo: 1. Fortalecimiento de la producción y la autosuficiencia alimentaria. 2. Impulso al crecimiento económico. 3. Dotación de infraestructura básica. 4. Reordenamiento agropecuario y forestal con criterios sociales, ecológicos y económicos. 5. Promoción de la salud. Con base en las políticas, se enuncian objetivos programas y subprogramas o proyectos.

Juventud, delito y trabajo en San Salvador de Jujuy (Argentina)

El delito juvenil y la inseguridad pública de la Argentina reciente son temas que se han instalado en la agenda tanto política como científica. Algunos autores proponen comprender a estos fenómenos como producto de los procesos de declive institucional que atraviesa actualmente el país, declive que se caracteriza por una serie de transformaciones de las estructuras institucionales de tradición social salarial que afectaron no solo a las economías domésticas sino a un estilo de vida organizado en torno al trabajo, la familia y la educación. En San Salvador de Jujuy, los jóvenes infractores de la ley penal tienen familias cuyas condiciones sociales aparentan derivarse de estos procesos: existencias cercanas a -inmersas en- la pobreza; en algunos casos, necesidades básicas insatisfechas; pertenencia a una escenografía urbana periférica y marginal. Además, estos jóvenes son percibidos y representados mediáticamente con sentidos valorativos cargados de prejuicios y posturas que esencializan el delito, invisibilizando el carácter social y cultural de la problemática. Precisamente, la propuesta de este trabajo radica en analizar y discutir las condiciones de vida de este segmento poblacional, junto con los procesos de exclusión social por los cuales transita de manera fluctuante, con el objetivo de contribuir, a través de un estudio situado, a la comprensión de una problemática cada vez más relevante

Palynology of marine sediment cores from the West African coast

Seven sediment cores from the cruises of the "Meteor" and "Valdivia" were examined palynologically. The cores were retrieved from the lower continental slope in the area of between 33.5° N and 8° N, off the West African coast. Most of the cores contain sediments from the last Glacial and Interglacial period. In some cases, the Holocene sediments are missing. Some individual cores contain sediments also from earlier Glacial and Interglacial periods. The main reason for making this palynological study was to find out the differences between the vegetation of Glacial and Interglacial periods in those parts of West Africa which at present belong to the Mediterranean zone, the Sahara and the zones of the savannas and tropical forests. In today's Mediterranean vegetation zone at core 33.5° N, forests and deciduous forests in particular, are missing during Glacial conditions. Semi-deserts are found instead of these. In the early isotope stage 1, there is a very significant development of forests which contain evergreen oaks; this is the Mediterranean type of vegestation development. The Sahara type of vegetation development is shown in four cores from between 27° N and 19° N. The differences between Glacial and Interglacial periods are very small. It must be assumed therefore that in this latitudes, both Glacial and Interglacial conditions gave rise to desert generally. The results are in favour of a slightly more arid climate during Glacial and more humid one during Interglacial periods. The southern boundary of the Sahara and the adjacent savannas with grassland and tropical woods were situated more to the south during the Glacial periods than they were during the Interglacial ones. In front of today's savanna belt, it can be seen from the palynological results that there are considerable differences between the vegetation of Glacial and Interglacial periods. The woods are more important in Interglacial periods. During the Glacial periods these are replaced from north to south decreasingly by grassland (savanna and rainforest type of vegetation development). The southern limit of the Sahara during stage 2 was somewhat between 12° N and 8° N which is between 1.5 and 5 degrees in latitude further south than it i s today. Not only do these differences in climate and vegetation apply to the maximum of the last Glacial and for the Holocene, but they apparently apply also to the older Glacial and Interglacial periods, where they have been found in the profiles. The North African deset belt can be said to have expanded during Glacial times both towards the north and towards the south. All the available evidence of this study indicates that the grass land or the semi-desert of the Southern Europe cam einto connection with those of the N Africa; there could not have been any forest zone between them. The present study was also a good opportunity for investigating some of the basic marine palynological problems. The very well known overrepresentation of pollen grains of the genus Pinus in marine sediments can be traced as fa as 21° N. The present southern limit for the genus Pinus is on the Canaries and on the African continent as approximately 31° N. Highest values of Ephedra pollen grains even occur south of the main area of the present distribution of that genus. These does not seem to be any satisfactory explanation for this. In general, it would appear that the transport of pollen grains from the north is more important than transport from the south. The results so far, indicate strongly that further palynological studies are necessary. These should concentrate particularly on cores from between 33° N and 27° N as well as between 17° N and 10° N. It would also be useful to have a more detailed examination of sediments from the last Intergalcial period (substage 5 e). Absolute pollen counts and more general examination of surface samples would be desirable. Surface samples should be taken from the shelf down to the bottom of the continental slope in different latitudes.

Pollen distribution in marine sediment samples along the south-western African coast

The distribution of pollen in marine sediments is used to reconstruct pathways of terrigenous input to the oceans and provides a record of vegetation change on adjacent continents. The wind transport routes of aeolian pollen is comprehensively illustrated by clusters of trajectories. Isobaric, 4-day backward trajectories are calculated using the modelled wind-field of ECHAM3, and are clustered on a seasonal basis to estimate the main pathways of aeolian particles to sites of marine cores in the south-eastern Atlantic. Trajectories and clusters based on the modelled wind-field of the Last Glacial Maximum hardly differ from those of the present-day. Trajectory clusters show three regional, and two seasonal patterns, determining the pathways of aeolian pollen transport into the south-eastern Atlantic ocean. Mainly, transport out of the continent occurs during austral fall and winter, when easterly and south-easterly winds prevail. South of 25°S, winds blow mostly from the west and southwest, and aeolian terrestrial input is very low. Generally, a good latitudinal correspondence exists between the distribution patterns of pollen in marine surface sediments and the occurrence of the source plants on the adjacent continent. The northern Angola Basin receives pollen and spores from the Congolian and Zambezian forests mainly through river discharge. The Zambezian vegetation zone is the main source area for wind-blown pollen in sediments of the Angola Basin, while the semi-desert and desert areas are the main sources for pollen in sediments of the Walvis Basin and on the Walvis Ridge. A transect of six marine pollen records along the south-western African coast indicates considerable changes in the vegetation of southern Africa between glacial and interglacial periods. Important changes in the vegetation are the decline of forests in equatorial Africa and the north of southern Africa and a northward shift of winter rain vegetation along the western escarpment.

Evaluating a Speech Communication System for deaf people

This paper describes the development of an Advanced Speech Communication System for Deaf People and its field evaluation in a real application domain: the renewal of Driver’s License. The system is composed of two modules. The first one is a Spanish into Spanish Sign Language (LSE: Lengua de Signos Española) translation module made up of a speech recognizer, a natural language translator (for converting a word sequence into a sequence of signs), and a 3D avatar animation module (for playing back the signs). The second module is a Spoken Spanish generator from sign-writing composed of a visual interface (for specifying a sequence of signs), a language translator (for generating the sequence of words in Spanish), and finally, a text to speech converter. For language translation, the system integrates three technologies: an example-based strategy, a rule-based translation method and a statistical translator. This paper also includes a detailed description of the evaluation carried out in the Local Traffic Office in the city of Toledo (Spain) involving real government employees and deaf people. This evaluation includes objective measurements from the system and subjective information from questionnaires. Finally, the paper reports an analysis of the main problems and a discussion about possible solutions.