Nicotinamide nucleotide and adenylate concentrations in mante, siphon and gill tissue of old and young Laternula elliptica individuals under control and experimental conditions

Future oceans are predicted to contain less oxygen than at present. This is because oxygen is less soluble in warmer water and predicted stratification will reduce mixing. Hypoxia in marine environments is thus likely to become more widespread in marine environments and understanding species-responses is important to predicting future impacts on biodiversity. This study used a tractable model, the Antarctic clam, Laternula elliptica, which can live for 36 years, and has a well-characterized ecology and physiology to understand responses to hypoxia and how the effect varied with age. Younger animals had a higher condition index, higher adenylate energy charge and transcriptional profiling indicated that they were physically active in their response to hypoxia, whereas older animals were more sedentary, with higher levels of oxidative damage and apoptosis in the gills. These effects could be attributed, in part, to age-related tissue scaling; older animals had proportionally less contractile muscle mass and smaller gills and foot compared with younger animals, with consequential effects on the whole-animal physiological response. The data here emphasize the importance of including age effects, as large mature individuals appear to be less able to resist hypoxic conditions and this is the size range that is the major contributor to future generations. Thus, the increased prevalence of hypoxia in future oceans may have marked effects on benthic organisms' abilities to persist and this is especially so for long-lived species when predicting responses to environmental perturbation.

Geometric Integrability of the Camassa-Holm Equation. II

It is known that the Camassa–Holm (CH) equation describes pseudo-spherical surfaces and that therefore its integrability properties can be studied by geometrical means. In particular, the CH equation admits nonlocal symmetries of “pseudo-potential type”: the standard quadratic pseudo-potential associated with the geodesics of the pseudo-spherical surfaces determined by (generic) solutions to CH, allows us to construct a covering π of the equation manifold of CH on which nonlocal symmetries can be explicitly calculated. In this article, we present the Lie algebra of (first-order) nonlocal π-symmetries for the CH equation, and we show that this algebra contains a semidirect sum of the loop algebra over sl(2,R) and the centerless Virasoro algebra. As applications, we compute explicit solutions, we construct a Darboux transformation for the CH equation, and we recover its recursion operator. We also extend our results to the associated Camassa–Holm equation introduced by J. Schiff.

Singularities around w=-1

Astronomical observations of luminosity distances derived from Type Ia supernovae, CMB spectrum and global matter distribution provide evidence of cosmic speed up of the Universe. Alternatively, cosmic acceleration might be due to an exotic fluid filling the Universe, known as dark energy. These have given rise to a collection of new cosmological evolutions, future singularites being the most perplexing ones (“big rip”, “sudden singularities”. . .).

Zonas de actividad logística : 25 años de experiencia española : evolución y tendencias : criterios y parámetros de diseño para su implantación y ordenación

El objeto de la investigación es analizar la situación de las plataformas logísticas y caracterizar las mismas, sus áreas funcionales y los parámetros de diseño que se utilizan para su planificación y desarrollo. La investigación se ha realizado sobre las plataformas logísticas existentes en España, si bien se ha contrastado la situación nacional con otras experiencias internacionales. Para ello se ha procedido al estudio del estado del arte a nivel internacional, determinando la terminología, caracterización y clasificación que aporta la comunidad científica al respecto sobre las plataformas logísticas. La investigación se ha centrado en el estudio de un elevado número de plataformas logísticas ubicadas en distintas Comunidades Autónomas, que representan en torno al cuarenta por ciento de las que se encuentran en estos momentos en activo, analizando sus datos básicos, su clasificación en lo que respecta a su grado de centralidad, su intermodalidad, su accesibilidad, y la información urbanística relativa a superficies de áreas funcionales, edificabilidades, usos principales, complementarios y no admitidos, red viaria, zonas verdes, y parámetros máximos y mínimos de ordenación. El análisis, valoración e interpretación de los resultados obtenidos, ha permitido concluir en la heterogeneidad existente sobre el término, proponiéndose por parte del autor un nuevo concepto que englobe y defina de forma genérica pero clara la tipología de plataformas logísticas presentes en el panorama nacional. Del mismo modo, y como consecuencia de la investigación realizada, ha sido posible la caracterización de una “plataforma logística tipo”, estableciendo unos parámetros de diseño estándar para desarrollos posteriores. Finalmente se proponen varias líneas de investigación. En primer lugar, analizar el conjunto del transporte de mercancías, para determinar y valorar su desequilibrio, para de este modo potenciar la intermodalidad e internacionalizar la misma; y, en segundo lugar, establecer una regulación global de las competencias y legislación en materia de planificación de centros logísticos, para racionalizar el desarrollo de estos elementos. The aim of this research is to analyze the situation of logistics platforms and to characterize them, their functional areas and the design parameters that are used in their planning and development. This study was conducted on logistics platforms in Spain, although the situation in Spain has been compared to other international experiences. For this purpose, the international state-of-the-art has been examined, determining the terminology, characterization and classification provided by the scientific community in regard to logistics platforms. The research focuses on the study of a large number of logistics platforms located in different Autonomous Regions, representing approximately 40% of those currently in operation. An analysis has been made of the fundamental data, classification in regard to the degree of centrality, intermodality, accessibility and the urban planning information relating to functional area spaces, as well as buildable potential, main, complementary and prohibited uses, the road network, green zones and maximum and minimum development planning parameters. The analysis, evaluation and interpretation of the results obtained has led to the conclusion of the heterogeneous nature of the term, and the author proposes a new concept that would cover and define, in a generic yet clear way, the typology of logistics platforms present in the national scenario. In a similar manner, and as a result of the research conducted, it has been possible to define a “logistics platform type”, establishing standard design parameters for future developments. Lastly, various lines of research are proposed. In the first place, to analyze overall goods transport to determine and evaluate its imbalances and, in this way, to promote its intermodality and internationalization. In the second place, to establish a global regulation of competencies and legislation with regard to the planning of logistics centers, to rationalize the development of these elements.

Bidirectional imprinting of a single gene: GNAS1 encodes maternally, paternally, and biallelically derived proteins

The GNAS1 gene encodes the α subunit of the guanine nucleotide-binding protein Gs, which couples signaling through peptide hormone receptors to cAMP generation. GNAS1 mutations underlie the hormone resistance syndrome pseudohypoparathyroidism type Ia (PHP-Ia), so the maternal inheritance displayed by PHP-Ia has raised suspicions that GNAS1 is imprinted. Despite this suggestion, in most tissues Gsα is biallelically encoded. In contrast, the large G protein XLαs, also encoded by GNAS1, is paternally derived. Because the inheritance of PHP-Ia predicts the existence of maternally, rather than paternally, expressed transcripts, we have investigated the allelic origin of other mRNAs derived from GNAS1. We find this gene to be remarkable in the complexity of its allele-specific regulation. Two upstream promoters, each associated with a large coding exon, lie only 11 kb apart, yet show opposite patterns of allele-specific methylation and monoallelic transcription. The more 5′ of these exons encodes the neuroendocrine secretory protein NESP55, which is expressed exclusively from the maternal allele. The NESP55 exon is 11 kb 5′ to the paternally expressed XLαs exon. The transcripts from these two promoters both splice onto GNAS1 exon 2, yet share no coding sequences. Despite their structural unrelatedness, the encoded proteins, of opposite allelic origin, both have been implicated in regulated secretion in neuroendocrine tissues. Remarkably, maternally (NESP55), paternally (XLαs), and biallelically (Gsα) derived proteins all are produced by different patterns of promoter use and alternative splicing of GNAS1, a gene showing simultaneous imprinting in both the paternal and maternal directions.

A new phylogenetic group of Propionibacterium acnes

Immunofluorescence microscopy-based identification of presumptive Propionibacterium acnes isolates, using the P. acnes-specific mAb QUBPa3, revealed five organisms with an atypical cellular morphology. Unlike the coryneform morphology seen with P. acnes types I and II, these isolates exhibited long slender filaments (which formed large tangled aggregates) not previously described in P. acnes. No reaction with mAbs that label P. acnes types IA (QUBPa1) and II (QUBPa2) was observed. Nucleotide sequencing of the 16S rRNA gene (1484 bp) revealed the isolates to have between 99.8 and 99.9 % identity to the 16S rRNA gene of the P. acnes type IA, IB and II strains NCTC 737, KPA171202 and NCTC 10390, respectively. Analysis of the recA housekeeping gene (1047 bp) did reveal, however, a greater number of conserved nucleotide polymorphisms between the sequences from these isolates and those from NCTC 737 (98.9 % identity), KPA171202 (98.9 % identity) and NCTC 10390 (99.1 % identity). Phylogenetic investigations demonstrated that the isolates belong to a novel recA cluster or lineage distinct from P. acnes types I and II. We now propose this new grouping as P. acnes type III. The prevalence and clinical importance of this novel recA lineage amongst isolates of P. acnes remains to be determined.

Genotypic and antimicrobial characterisation of Propionibacterium acnes isolates from surgically excised lumbar disc herniations

The anaerobic skin commensal Propionibacterium acnes is an underestimated cause of human infections and clinical conditions. Previous studies have suggested a role for the bacterium in lumbar disc herniation and infection. To further investigate this, five biopsy samples were surgically excised from each of 64 patients with lumbar disc herniation. P. acnes and other bacteria were detected by anaerobic culture, followed by biochemical and PCR-based identification. In total, 24/64 (38%) patients had evidence of P. acnes in their excised herniated disc tissue. Using recA and mAb typing methods, 52% of the isolates were type II (50% of culture-positive patients), while type IA strains accounted for 28% of isolates (42% patients). Type III (11% isolates; 21% patients) and type IB strains (9% isolates; 17% patients) were detected less frequently. The MIC values for all isolates were lowest for amoxicillin, ciprofloxacin, erythromycin, rifampicin, tetracycline, and vancomycin (≤1mg/L). The MIC for fusidic acid was 1-2 mg/L. The MIC for trimethoprim and gentamicin was 2 to ≥4 mg/L. The demonstration that type II and III strains, which are not frequently recovered from skin, predominated within our isolate collection (63%) suggests that the role of P. acnes in lumbar disc herniation should not be readily dismissed. © 2013 Jess Rollason et al.

Use of dual-grating sensors formed by different types of fiber Bragg gratings for simultaneous temperature and strain measurements

We report on a systematic investigation of the dependence of both temperature and strain sensitivities on the fiber Bragg grating type, including the well-known Type I, Type IIA, and a new type that we have designated Type IA, using both hydrogen-free and hydrogenated B/Ge codoped fibres. We have identified distinct sensitivity characteristics for each grating type, and we have used them to implement a novel dual-grating, dual-parameter sensor device. Three dual-grating sensing schemes with different combinations of grating type have been constructed and compared, and that of a Type IA-Type IIA combination exhibits the best performance, which is also superior to that of previously reported grating-based structures. The characteristics of the measurement errors in such dual-grating sensor systems is also presented in detail. © 2004 Optical Society of America.

Stable isotopes, PCBs and pesticide concentrations in zooplankton, seawater and POM from Kongsfjorden and Liefdefjorden, Svalbard

Differences in bioaccumulation of persistent organic pollutants (POPs) between fjords characterized by different water masses were investigated by comparing POP concentrations, patterns and bioaccumulation factors (BAFs) in seven species of zooplankton from Liefdefjorden (Arctic water mass) and Kongsfjorden (Atlantic water mass), Svalbard, Norway. No difference in concentrations and patterns of POPs was observed in seawater and POM; however higher concentrations and BAFs for certain POPs were found in species of zooplankton from Kongsfjorden. The same species were sampled in both fjords and the differences in concentrations of POPs and BAFs were most likely due to fjord specific characteristics, such as ice cover and timing of snow/glacier melt. These confounding factors make it difficult to conclude on water mass (Arctic vs. Atlantic) specific differences and further to extrapolate these results to possible climate change effects on accumulation of POPs in zooplankton. The present study suggests that zooplankton do biomagnify POPs, which is important for understanding contaminant uptake and flux in zooplankton, though consciousness regarding the method of evaluation is important.

Isotopic composition of diet and tissues, and isotope discrimination factors for pink-footed and barnacle geese, Svalbard

Breeding in the high Arctic is time constrained and animals should therefore start with their annual reproduction as early as possible. To allow for such early reproduction in migratory birds, females arrive at the breeding grounds either with body stores or they try to rapidly develop their eggs after arrival using local resources. Svalbard breeding barnacle geese Branta leucopsis have to fly non-stop for about 1100 km from their last continental staging site to the archipelago making the transport of body stores costly. However, environmental conditions at the breeding grounds are highly unpredictable favouring residual body stores allowing for egg production after arrival on the breeding grounds. We estimated the reliance on southern continental resources, i.e. body stores for egg formation, in barnacle geese using stable isotope ratios in the geese's forage along the flyway and in their eggs. Females adopted mixed breeding strategies by using southern resources as well as local resources to varying extents for egg formation. Southern capital in lipid-free yolk averaged 41% (range: 23-65%), early laid eggs containing more southern capital than eggs laid late in the season. Yolk lipids and albumen did not vary over time and averaged a southern capital proportion of 54% (range: 32-73%) and 47% (range: 25-88%), respectively. Our findings indicate that female geese vary the use of southern resources when synthesizing their eggs and this allocation also varies among egg tissues. Their mixed and flexible use of distant and local resources potentially allows for adaptive adjustments to environmental conditions encountered at the archipelago just before breeding.

Soil properties and microbial indicators of samples from Lake Wellman, Darwin Mountains, Antarctica

Four pedons on each of four drift sheets in the Lake Wellman area of the Darwin Mountains were sampled for chemical and microbial analyses. The four drifts, Hatherton, Britannia, Danum, and Isca, ranged from early Holocene (10 ka) to mid-Quaternary (c. 900 ka). The soil properties of weathering stage, salt stage, and depths of staining, visible salts, ghosts, and coherence increase with drift age. The landforms contain primarily high-centred polygons with windblown snow in the troughs. The soils are dominantly complexes of Typic Haplorthels and Typic Haploturbels. The soils were dry and alkaline with low levels of organic carbon, nitrogen and phosphorus. Electrical conductivity was high accompanied by high levels of water soluble anions and cations (especially calcium and sulphate in older soils). Soil microbial biomass, measured as phospholipid fatty acids, and numbers of culturable heterotrophic microbes, were low, with highest levels detected in less developed soils from the Hatherton drift. The microbial community structure of the Hatherton soil also differed from that of the Britannia, Danum and Isca soils. Ordination revealed the soil microbial community structure was influenced by soil development and organic carbon.