964 resultados para mesh: Models, Theoretical
Resumo:
Differential scanning calorimetry (DSC) in association with chemical analysis was applied to assess the maturity reached by the organic fraction of Municipal Solid Wastes (MSW) subjected to composting processes with manual and fixed aeration and sampled at different composting times. Thermograms showed that the difference in the treatments, i.e., the manual aeration and the fixed aeration, had no relevant effect on the stabilization and maturation of OM in the substrates. Common thermal effects observed were: a low temperature endotherm assigned to dehydration and/or loss of peripheral polysaccharides chains; a medium temperature exotherm assigned to loss of peptidic structures, and a high temperature exotherm assigned to oxydation and polycondensation of aromatic nuclei of the molecule. Results obtained suggest that in the experimental conditions used, a shorter time of composting (about 30 d) appears adequate, in order to limit the extended mineralization of OM, whereas a prolonged composting time (up to 132 d) would produce a compost of poor quality with high ash content and low OM content.
Resumo:
The structure of an ecological community is shaped by several temporally varying mechanisms. Such mechanisms depend in a large extent on species interactions, which are themselves manifestations of the community's own structure. Dynamics and structure are then mutually determined. The assembly models are mathematical or computational models which simulate the dynamics of ecological communities resulting from a historical balance among colonizations and local extinctions, by means of sequential species introductions and their interactions with resident species. They allow analyzing that double relationship between structure and dynamics, recognizing its temporal dependence. It is assumed two spatiotemporal scales: (i) a local scale, where species co-occur and have their dynamics explicitly simulated and (ii) a regional scale without dynamics, representing the external environment which the potential colonizers come from. The mathematical and computational models used to simulate the local dynamics are quite variable, being distinguished according to the complexity mode of population representation, including or not intra or interspecific differences. They determine the community state, in terms of abundances, interactions, and extinctions between two successive colonization attempts. The schedules of species introductions also follow diverse (although arbitrary) rules, which vary qualitatively with respect to species appearance mode, whether by speciation or by immigration, and quantitatively with respect to their rates of introduction into the community. Combining these criteria arises a great range of approaches for assembly models, each with its own limitations and questions, but contributing in a complementary way to elucidate the mechanisms structuring natural communities. To present such approaches, still incipient as research fields in Brazil, to describe some methods of analysis and to discuss the implications of their assumptions for the understanding of ecological patterns are the objectives of the present review.
Resumo:
When searching for prospective novel peptides, it is difficult to determine the biological activity of a peptide based only on its sequence. The trial and error approach is generally laborious, expensive and time consuming due to the large number of different experimental setups required to cover a reasonable number of biological assays. To simulate a virtual model for Hymenoptera insects, 166 peptides were selected from the venoms and hemolymphs of wasps, bees and ants and applied to a mathematical model of multivariate analysis, with nine different chemometric components: GRAVY, aliphaticity index, number of disulfide bonds, total residues, net charge, pI value, Boman index, percentage of alpha helix, and flexibility prediction. Principal component analysis (PCA) with non-linear iterative projections by alternating least-squares (NIPALS) algorithm was performed, without including any information about the biological activity of the peptides. This analysis permitted the grouping of peptides in a way that strongly correlated to the biological function of the peptides. Six different groupings were observed, which seemed to correspond to the following groups: chemotactic peptides, mastoparans, tachykinins, kinins, antibiotic peptides, and a group of long peptides with one or two disulfide bonds and with biological activities that are not yet clearly defined. The partial overlap between the mastoparans group and the chemotactic peptides, tachykinins, kinins and antibiotic peptides in the PCA score plot may be used to explain the frequent reports in the literature about the multifunctionality of some of these peptides. The mathematical model used in the present investigation can be used to predict the biological activities of novel peptides in this system, and it may also be easily applied to other biological systems. © 2011 Elsevier Inc.
Resumo:
Objective. This study aimed to investigate the stress distribution in screwed implant-supported prostheses with different implant-abutment connections by using a photoelastic analysis. Materials and methods. Four photoelastic models were fabricated in PL-2 resin and divided according to the implant-abutment connection (external hexagon (EH) and Morse taper (MT) implants (3.75 × 11.5 mm)) and the number crowns (single and 3-unit piece). Models were positioned in a circular polariscope and 100-N axial and oblique (45) loading were applied in the occlusal surface of the crowns by using a universal testing machine. The stresses were photographically recorded and qualitatively analyzed using software (Adobe Photoshop). Results. Under axial loading, the MT implants exhibited a lower number of fringes for single-unit crowns than EH implants, whereas for a 3-unit piece the MT implants showed a higher number of fringes vs EH implants. The oblique loading increased the number of fringes for all groups. Conclusion. In conclusion, the MT implant-abutment connection reduced the amount of stress in single-unit crowns, for 3-unit piece crowns the amount of stress was lower using an external hexagon connection. The stress pattern was similar for all groups. Oblique loading promoted a higher stress concentration than axial loading. © Informa Healthcare.
Resumo:
Background: Plasmodium vivax is a widely distributed, neglected parasite that can cause malaria and death in tropical areas. It is associated with an estimated 80-300 million cases of malaria worldwide. Brazilian tropical rain forests encompass host- and vector-rich communities, in which two hypothetical mechanisms could play a role in the dynamics of malaria transmission. The first mechanism is the dilution effect caused by presence of wild warm-blooded animals, which can act as dead-end hosts to Plasmodium parasites. The second is diffuse mosquito vector competition, in which vector and non-vector mosquito species compete for blood feeding upon a defensive host. Considering that the World Health Organization Malaria Eradication Research Agenda calls for novel strategies to eliminate malaria transmission locally, we used mathematical modeling to assess those two mechanisms in a pristine tropical rain forest, where the primary vector is present but malaria is absent. Methodology/Principal Findings: The Ross-Macdonald model and a biodiversity-oriented model were parameterized using newly collected data and data from the literature. The basic reproduction number (R0) estimated employing Ross-Macdonald model indicated that malaria cases occur in the study location. However, no malaria cases have been reported since 1980. In contrast, the biodiversity-oriented model corroborated the absence of malaria transmission. In addition, the diffuse competition mechanism was negatively correlated with the risk of malaria transmission, which suggests a protective effect provided by the forest ecosystem. There is a non-linear, unimodal correlation between the mechanism of dead-end transmission of parasites and the risk of malaria transmission, suggesting a protective effect only under certain circumstances (e.g., a high abundance of wild warm-blooded animals). Conclusions/Significance: To achieve biological conservation and to eliminate Plasmodium parasites in human populations, the World Health Organization Malaria Eradication Research Agenda should take biodiversity issues into consideration. © 2013 Laporta et al.
Resumo:
Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)
Resumo:
Topographical surfaces can be represented with a good degree of accuracy by means of maps. However these are not always the best tools for the understanding of more complex reliefs. In this sense, the greatest contribution of this work is to specify and to implement the architecture of an opensource software system capable of representing TIN (Triangular Irregular Network) based digital terrain models. The system implementation follows the object oriented programming and generic paradigms enabling the integration of various opensource tools such as GDAL, OGR, OpenGL, OpenSceneGraph and Qt. Furthermore, the representation core of the system has the ability to work with multiple topological data structures from which can be extracted, in constant time, all the connectivity relations between the entities vertices, edges and faces existing in a planar triangulation what helps enormously the implementation for real time applications. This is an important capability, for example, in the use of laser survey data (Lidar, ALS, TLS), allowing for the generation of triangular mesh models in the order of millions of points.
Resumo:
Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
Resumo:
We have previously proposed a role of hydration in the allosteric control of hemoglobin based on the effect of varying concentrations of polyols and polyethers on the human hemoglobin oxygen affinity and on the solution water activity (Colombo, M. F., Rau, D. C., and Parsegian, V. A. (1992) Science 256, 655-659). Here, the original analyses are extended to test the possibility of concomitant solute and water allosteric binding and by introducing the bulk dielectric constant as a variable in our experiments. We present data which indicate that glycine and glucose influence HbA oxygen affinity to the same extent, despite the fact that glycine increases and glucose decreases the bulk dielectric constant of the solution. Furthermore, we derive an equation linking changes in oxygen affinity to changes in differential solute and water binding to test critically the possibility of neutral solute heterotropic binding. Applied to the data, these analyses support our original interpretation that neutral solutes act indirectly on the regulation of allosteric behavior of hemoglobin by varying the chemical potential of water in solution. This leads to a displacement of the equilibrium between Hb conformational states in proportion to their differential hydration.
Resumo:
Introduction: The identification of stages of dietary change and the factors affecting food choices can direct more effective nutritional intervention against coronary heart disease progression. Objective: Identify the stages of change of eating behavior and its relation with nutritional status, food consumption and previous cardiovascular events in patients who underwent coronary angioplasty. Methods: A cross-sectional study with 200 hospitalized patients from a specialized cardiology hospital, after elective coronary angioplasty. They were applied an algorithm that identifies the provision of change of eating habits for a healthier pattern. Variables measured were stages of change of eating behavior, nutritional status, food consumption and cardiovascular events (previous myocardial infarction or angioplasty). It was realized comparison of averages by analysis of variance or Student's test and Chi-square test for qualitative variables. Value of significance was taken at 5%. Results: The patients were classified in the following stages: 36% maintenance, 26% preparation, 17% precontemplation, 12% action and 9% contemplation. It was observed higher cardiovascular events in maintenance/action group (p = 0.04), higher consumption of calories (p = 0.04), meat/eggs (p = 0.01) and sweets (p = 0.03) in preparation stage, comparing to maintenance group, and no association between nutritional status and stages of change (p = 0.13), although 62% of the individuals in maintenance stage were overweight. Conclusions: This work contributed to identifying the stages of change and conditions that favor changes in eating pattern. Even patients that classified themselves into the maintenance stage need to adjust their eating habits in order to reach a healthy weight.
Resumo:
Ziel dieser Arbeit war der Aufbau und Einsatz des Atmosphärischen chemischen Ionisations-Massenspektrometers AIMS für boden- und flugzeuggetragene Messungen von salpetriger Säure (HONO). Für das Massenspektrometer wurden eine mit Gleichspannung betriebene Gasentladungsionenquelle und ein spezielles Druckregelventil entwickelt. Während der Instrumentenvergleichskampagne FIONA (Formal Intercomparisons of Observations of Nitrous Acid) an einer Atmosphären-Simulationskammer in Valencia (Spanien) wurde AIMS für HONO kalibriert und erstmals eingesetzt. In verschiedenen Experimenten wurden HONO-Mischungsverhältnisse zwischen 100 pmol/mol und 25 nmol/mol erzeugt und mit AIMS interferenzfrei gemessen. Innerhalb der Messunsicherheit von ±20% stimmen die massenspektrometrischen Messungen gut mit den Methoden der Differenziellen Optischen Absorptions-Spektrometrie und der Long Path Absorption Photometrie überein. Die Massenspektrometrie kann somit zum schnellen und sensitiven Nachweis von HONO in verschmutzter Stadtluft und in Abgasfahnen genutzt werden.rnErste flugzeuggetragene Messungen von HONO mit AIMS wurden 2011 bei der Messkampagne CONCERT (Contrail and Cirrus Experiment) auf dem DLR Forschungsflugzeug Falcon durchgeführt. Hierbei konnte eine Nachweisgrenze von < 10 pmol/mol (3σ, 1s) erreicht werden. Bei Verfolgungsflügen wurden im jungen Abgasstrahl von Passagierflugzeugen molare HONO zu Stickoxid-Verhältnisse (HONO/NO) von 2.0 bis 2.5% gemessen. HONO wird im Triebwerk durch die Reaktion von NO mit OH gebildet. Ein gemessener abnehmender Trend der HONO/NO Verhältnisse mit zunehmendem Stickoxid-Emissionsindex wurde bestätigt und weist auf eine OH Limitierung im jungen Abgasstrahl hin.rnNeben den massenspektrometrischen Messungen wurden Flugzeugmessungen der Partikelsonde Forward Scattering Spectrometer Probe FSSP-300 in jungen Kondensstreifen ausgewertet und analysiert. Aus den gemessenen Partikelgrößenverteilungen wurden Extinktions- und optische Tiefe-Verteilungen abgeleitet und für die Untersuchung verschiedener wissenschaftlicher Fragestellungen, z.B. bezüglich der Partikelform in jungen Kondensstreifen und ihrer Klimawirkung, zur Verfügung gestellt. Im Rahmen dieser Arbeit wurde der Einfluss des Flugzeug- und Triebwerktyps auf mikrophysikalische und optische Eigenschaften von Kondensstreifen untersucht. Unter ähnlichen meteorologischen Bedingungen bezüglich Feuchte, Temperatur und stabiler thermischer Schichtung wurden 2 Minuten alte Kondensstreifen der Passagierflugzeuge vom Typ A319-111, A340-311 und A380-841 verglichen. Im Rahmen der Messunsicherheit wurde keine Änderung des Effektivdurchmessers der Partikelgrößenverteilungen gefunden. Hingegen nehmen mit zunehmendem Flugzeuggewicht die Partikelanzahldichte (162 bis 235 cm-3), die Extinktion (2.1 bis 3.2 km-1), die Absinktiefe des Kondensstreifens (120 bis 290 m) und somit die optische Tiefe der Kondensstreifen (0.25 bis 0.94) zu. Der gemessene Trend wurde durch Vergleich mit zwei unabhängigen Kondensstreifen-Modellen bestätigt. Mit den Messungen wurde eine lineare Abhängigkeit der totalen Extinktion (Extinktion mal Querschnittsfläche des Kondensstreifens) vom Treibstoffverbrauch pro Flugstrecke gefunden und bestätigt.
Resumo:
Withdrawal reflexes of the mollusk Aplysia exhibit sensitization, a simple form of long-term memory (LTM). Sensitization is due, in part, to long-term facilitation (LTF) of sensorimotor neuron synapses. LTF is induced by the modulatory actions of serotonin (5-HT). Pettigrew et al. developed a computational model of the nonlinear intracellular signaling and gene network that underlies the induction of 5-HT-induced LTF. The model simulated empirical observations that repeated applications of 5-HT induce persistent activation of protein kinase A (PKA) and that this persistent activation requires a suprathreshold exposure of 5-HT. This study extends the analysis of the Pettigrew model by applying bifurcation analysis, singularity theory, and numerical simulation. Using singularity theory, classification diagrams of parameter space were constructed, identifying regions with qualitatively different steady-state behaviors. The graphical representation of these regions illustrates the robustness of these regions to changes in model parameters. Because persistent protein kinase A (PKA) activity correlates with Aplysia LTM, the analysis focuses on a positive feedback loop in the model that tends to maintain PKA activity. In this loop, PKA phosphorylates a transcription factor (TF-1), thereby increasing the expression of an ubiquitin hydrolase (Ap-Uch). Ap-Uch then acts to increase PKA activity, closing the loop. This positive feedback loop manifests multiple, coexisting steady states, or multiplicity, which provides a mechanism for a bistable switch in PKA activity. After the removal of 5-HT, the PKA activity either returns to its basal level (reversible switch) or remains at a high level (irreversible switch). Such an irreversible switch might be a mechanism that contributes to the persistence of LTM. The classification diagrams also identify parameters and processes that might be manipulated, perhaps pharmacologically, to enhance the induction of memory. Rational drug design, to affect complex processes such as memory formation, can benefit from this type of analysis.
Resumo:
A model of Drosophila circadian rhythm generation was developed to represent feedback loops based on transcriptional regulation of per, Clk (dclock), Pdp-1, and vri (vrille). The model postulates that histone acetylation kinetics make transcriptional activation a nonlinear function of [CLK]. Such a nonlinearity is essential to simulate robust circadian oscillations of transcription in our model and in previous models. Simulations suggest that two positive feedback loops involving Clk are not essential for oscillations, because oscillations of [PER] were preserved when Clk, vri, or Pdp-1 expression was fixed. However, eliminating positive feedback by fixing vri expression altered the oscillation period. Eliminating the negative feedback loop in which PER represses per expression abolished oscillations. Simulations of per or Clk null mutations, of per overexpression, and of vri, Clk, or Pdp-1 heterozygous null mutations altered model behavior in ways similar to experimental data. The model simulated a photic phase-response curve resembling experimental curves, and oscillations entrained to simulated light-dark cycles. Temperature compensation of oscillation period could be simulated if temperature elevation slowed PER nuclear entry or PER phosphorylation. The model makes experimental predictions, some of which could be tested in transgenic Drosophila.
Resumo:
We seek to determine the relationship between threshold and suprathreshold perception for position offset and stereoscopic depth perception under conditions that elevate their respective thresholds. Two threshold-elevating conditions were used: (1) increasing the interline gap and (2) dioptric blur. Although increasing the interline gap increases position (Vernier) offset and stereoscopic disparity thresholds substantially, the perception of suprathreshold position offset and stereoscopic depth remains unchanged. Perception of suprathreshold position offset also remains unchanged when the Vernier threshold is elevated by dioptric blur. We show that such normalization of suprathreshold position offset can be attributed to the topographical-map-based encoding of position. On the other hand, dioptric blur increases the stereoscopic disparity thresholds and reduces the perceived suprathreshold stereoscopic depth, which can be accounted for by a disparity-computation model in which the activities of absolute disparity encoders are multiplied by a Gaussian weighting function that is centered on the horopter. Overall, the statement "equal suprathreshold perception occurs in threshold-elevated and unelevated conditions when the stimuli are equally above their corresponding thresholds" describes the results better than the statement "suprathreshold stimuli are perceived as equal when they are equal multiples of their respective threshold values."