Intravital visualization of hematopoietic stem cell and neutrophil behavior in long bones of mice

Magdeburg, Univ., Fak. für Naturwiss., Diss., 2011

Discovery and visualization of interesting patterns

Die Preise für Speicherplatz fallen stetig, da verwundert es nicht, dass Unternehmen riesige Datenmengen anhäufen und sammeln. Diese immensen Datenmengen müssen jedoch mit geeigneten Methoden analysiert werden, um für das Unternehmen überlebensnotwendige Muster zu identifizieren. Solche Muster können Probleme aber auch Chancen darstellen. In jedem Fall ist es von größter Bedeutung, rechtzeitig diese Muster zu entdecken, um zeitnah reagieren zu können. Um breite Nutzerschichten anzusprechen, müssen Analysemethoden ferner einfach zu bedienen sein, sofort Rückmeldungen liefern und intuitive Visualisierungen anbieten. Ich schlage in der vorliegenden Arbeit Methoden zur Visualisierung und Filterung von Assoziationsregeln basierend auf ihren zeitlichen Änderungen vor. Ich werde lingustische Terme (die durch Fuzzymengen modelliert werden) verwenden, um die Historien von Regelbewertungsmaßen zu charakterisieren und so eine Ordnung von relevanten Regeln zu generieren. Weiterhin werde ich die vorgeschlagenen Methoden auf weitereModellarten übertragen, die Software-Plattformvorstellen, die die Analysemethoden dem Nutzer zugänglich macht und schließlich empirische Auswertungen auf Echtdaten aus Unternehmenskooperationen vorstellen, die die Wirksamkeit meiner Vorschläge belegen.

Illustrative visualization of medical data sets

Magdeburg, Univ., Fak. für Informatik, Diss., 2014

Illustrative visualization of medical data sets

Magdeburg, Univ., Fak. für Informatik, Diss., 2014

Empirical studies in industrial location: an assessment of their methods and results

This paper surveys recent evidence on the determinants of (national and/or foreign) industrial location. We find that the basic analytical framework has remained essentially unaltered since the early contributions of the early 1980's while, in contrast, there have been significant advances in the quality of the data and, to a lesser extent, the econometric modelling. We also identify certain determinants (neoclassical and institutional factors) that tend to provide largely consistent results across the reviewed studies. In light of this evidence, we finally suggest future lines of research.

Quantitative comparison of reconstruction methods for intra-voxel fiber recovery from diffusion MRI.

Validation is arguably the bottleneck in the diffusion magnetic resonance imaging (MRI) community. This paper evaluates and compares 20 algorithms for recovering the local intra-voxel fiber structure from diffusion MRI data and is based on the results of the "HARDI reconstruction challenge" organized in the context of the "ISBI 2012" conference. Evaluated methods encompass a mixture of classical techniques well known in the literature such as diffusion tensor, Q-Ball and diffusion spectrum imaging, algorithms inspired by the recent theory of compressed sensing and also brand new approaches proposed for the first time at this contest. To quantitatively compare the methods under controlled conditions, two datasets with known ground-truth were synthetically generated and two main criteria were used to evaluate the quality of the reconstructions in every voxel: correct assessment of the number of fiber populations and angular accuracy in their orientation. This comparative study investigates the behavior of every algorithm with varying experimental conditions and highlights strengths and weaknesses of each approach. This information can be useful not only for enhancing current algorithms and develop the next generation of reconstruction methods, but also to assist physicians in the choice of the most adequate technique for their studies.

Visualization of recombination intermediates produced by RAD52-mediated single-strand annealing.

Double-strand breaks (DSBs) occur frequently during DNA replication. They are also caused by ionizing radiation, chemical damage or as part of the series of programmed events that occur during meiosis. In yeast, DSB repair requires RAD52, a protein that plays a critical role in homologous recombination. Here we describe the actions of human RAD52 protein in a model system for single-strand annealing (SSA) using tailed (i.e. exonuclease resected) duplex DNA molecules. Purified human RAD52 protein binds resected DSBs and promotes associations between complementary DNA termini. Heteroduplex intermediates of these recombination reactions have been visualized by electron microscopy, revealing the specific binding of multiple rings of RAD52 to the resected termini and the formation of large protein complexes at heteroduplex joints formed by RAD52-mediated annealing.

Reliability of serological methods for detection of leishmaniasis in portuguese domestic and wild reservoirs

A direct agglutination test (DAT) and an immunofluorescence technique (IFAT) were compared for detection of Leishmania infantum infection in 43 dogs and five foxes from Alto-Douro and Arrábida, two known endemic areas in Portugal. In four dogs with proved canine leishmaniasis, both DAT and IFAT showed positive readings (titres >1:320 and >1:128). Of 34 samples collected from apparently healthy dogs, ten were positive by both serological tests and eight were serologically positive by one test or the other. Three foxes out of five captured in this area, scored titres indicative of leishmaniasis in both DAT and IFAT. The concordance between DAT and IFAT in all collected samples (48) was 81.25%. Considering these and previous studies in the adjacent Mediterranean areas, the seroprevalence of L. infantum infection in the canine and vulpine populations appear to be of high magnitude.