Survey and impact assessment of derelict fish traps in St. Thomas and St. John, U.S. Virgin Islands

Since 2001, NOAA National Centers for Coastal Ocean Science (NCCOS), Center for Coastal Monitoring and Assessment’s (CCMA) Biogeography Branch (BB) has been working with federal and territorial partners to characterize, monitor, and assess the status of the marine environment across the U.S. Virgin Islands (USVI). At the request of the St. Thomas Fisherman’s Association (STFA) and NOAA Marine Debris Program, CCMA BB developed new partnerships and novel technologies to scientifically assess the threat from derelict fish traps (DFTs). Traps are the predominant gear used for finfish and lobster harvesting in St. Thomas and St. John. Natural phenomena (ground swells, hurricanes) and increasing competition for space by numerous user groups have generated concern about increasing trap loss and the possible ecological, as well as economic, ramifications. Prior to this study, there was a general lack of knowledge regarding derelict fish traps in the Caribbean. No spatially explicit information existed regarding fishing effort, abundance and distribution of derelict traps, the rate at which active traps become derelict, or areas that are prone to dereliction. Furthermore, there was only limited information regarding the impacts of derelict traps on natural resources including ghost fishing. This research identified two groups of fishing communities in the region: commercial fishing that is most active in deeper waters (30 m and greater) and an unknown number of unlicensed subsistence and or commercial fishers that fish closer to shore in shallower waters (30 m and less). In the commercial fishery there are an estimated 6,500 active traps (fish and lobster combined). Of those traps, nearly 8% (514) were reported lost during the 2008-2010 period. Causes of loss/dereliction include: movement of the traps or loss of trap markers due to entanglement of lines by passing vessels; theft; severe weather events (storms, large ground swells); intentional disposal by fishermen; traps becoming caught on various bottom structures (natural substrates, wrecks, etc.); and human error.

An assessment of chemical contaminants detected in passive water samplers deployed in the St. Thomas East End Reserves (STEER)

This report is the second in a series from a project to assess land-based sources of pollution (LBSP) and effects in the St. Thomas East End Reserves (STEER) in St. Thomas, USVI, and is the result of a collaborative effort between NOAA’s National Centers for Coastal Ocean Science, the USVI Department of Planning and Natural Resources, the University of the Virgin Islands, and The Nature Conservancy. Passive water samplers (POCIS) were deployed in the STEER in February 2012. Developed by the US Geological Survey (USGS) as a tool to detect the presence of water soluble contaminants in the environment, POCIS samplers were deployed in the STEER at five locations. In addition to the February 2012 deployment, the results from an earlier POCIS deployment in May 2010 in Turpentine Gut, a perennial freshwater stream which drains to the STEER, are also reported. A total of 26 stormwater contaminants were detected at least once during the February 2012 deployment in the STEER. Detections were high enough to estimate ambient water concentrations for nine contaminants using USGS sampling rate values. From the May 2010 deployment in Turpentine Gut, 31 stormwater contaminants were detected, and ambient water concentrations could be estimated for 17 compounds. Ambient water concentrations were estimated for a number of contaminants including the detergent/surfactant metabolite 4-tert-octylphenol, phthalate ester plasticizers DEHP and DEP, bromoform, personal care products including menthol, indole, n,n-diethyltoluamide (DEET), along with the animal/plant sterol cholesterol, and the plant sterol beta-sitosterol. Only DEHP appeared to have exceeded a water quality guideline for the protection of aquatic organisms.

An assessment of chemical contaminants, toxicity and benthic infauna in sediments from the St. Thomas East End Reserves (STEER)

This report contains a chemical and biological characterization of sediments from the St. Thomas East End Reserves (STEER) in St. Thomas, U.S. Virgin Islands (USVI). The STEER Management Plan (published in 2011) identified chemical contaminants and habitat loss as high or very high threats and called for a characterization of chemical contaminants as well as an assessment of their effects on natural resources. The baseline information contained in this report on chemical contaminants, toxicity and benthic infaunal community composition can be used to assess current conditions, as well as the efficacy of future restoration activities. In this phase of the project, 185 chemical contaminants, including a number of organic (e.g., hydrocarbons and pesticides) and inorganic (e.g., metals) compounds, were analyzed from 24 sites in the STEER. Sediments were also analyzed using a series of toxicity bioassays, including amphipod mortality, sea urchin fertilization impairment, and the cytochrome P450 Human Reporter Gene System (HRGS), along with a characterization of the benthic infaunal community. Higher levels of chemical contaminants were found in Mangrove Lagoon and Benner Bay in the western portion of the study area than in the eastern area. The concentrations of polychlorinated biphenyls (PCBs), DDT (dichlorodiphenyltrichloroethane), chlordane, zinc, copper, lead and mercury were above a NOAA sediment quality guideline at one or more sites, indicating impacts may be present in more sensitive species or life stages in the benthic environment. Copper at one site in Benner Bay, however, was above a NOAA guideline indicating that effects on benthic organisms were likely. The antifoulant boat hull ingredient tributyltin, or TBT, was found at the third highest concentration in the history of NOAA’s National Status and Trends (NS&T) Program, which monitors the Nation’s coastal and estuarine waters for chemical contaminants and bioeffects. Unfortunately, there do not appear to be any established sediment quality guidelines for TBT. Results of the bioassays indicated significant sediment toxicity in Mangrove Lagoon and Benner Bay using multiple tests. The benthic infaunal communities in Mangrove Lagoon and Benner Bay appeared severely diminished.

Benthic habitats of Fish Bay, Coral Bay and the St. Thomas East End Reserve

NOAA’s National Centers for Coastal Ocean Science Biogeography Branch has mapped and characterized large portions of the coral reef ecosystems inside the U.S. coastal and territorial waters, including the U.S. Caribbean. The complementary protocols used in these efforts have enabled scientists and managers to quantitatively and qualitatively compare marine ecosystems in tropical U.S. waters. The Biogeography Branch used similar protocols to generate new benthic habitat maps for Fish Bay, Coral Bay and the St. Thomas East End Reserve (STEER). While this mapping effort marks the third time that some of these shallow-water habitats (≤40 m) have been mapped, it is the first time that nearly 100% of the seafloor has been characterized in each of these areas. It is also the first time that high resolution imagery describing seafloor depth has been collected in each of these areas. Consequently, these datasets provide new information describing the distribution of coral reef ecosystems and serve as a spatial baseline for monitoring change in the Fish Bay, Coral Bay and the STEER. Benthic habitat maps were developed for approximately 64.3 square kilometers of seafloor in and around Fish Bay, Coral Bay and the STEER. Twenty seven percent (17.5 square kilometers) of these habitat maps describe the seafloor inside the boundaries of the STEER, the Virgin Islands National Park and the Virgin Islands Coral Reef National Monument. The remaining 73% (46.8 square kilometers) describe the seafloor outside of these MPA boundaries. These habitat maps were developed using a combination of semi-automated and manual classification methods. Habitats were interpreted from aerial photographs and LiDAR (Light Detection and Ranging) imagery. In total, 155 distinct combinations of habitat classes describing the geology and biology of the seafloor were identified from the source imagery.

Emiliano Mac Donagh - Un “Cuento de viejas” y otros cuentos viejos.

Al revisar viejos papeles familiares de nuestro padre, el Dr. Emiliano Mac Donagh (1896 – 1961) hemos descubierto, como escondidos, unos cuentos breves publicados entre 1929 y 1934. Ficcionales, pintorescos, no han figurado en la nómina de sus escritos, con excepción de El Naturalista, publicado en 1929 en el diario La Nación, y recientemente reproducido en la serie ProBiota (http://ictiologíaargentina.blogspot.com/16) Ofrecemos a la curiosidad de los ictiólogos los tres relatos publicados en 1930 en la revista Número, editada en Buenos Aires. Tanto Un cuento de viejas, como El sabio ebrio, y La quimera, el gallo y el elefante tienen a los peces como centro de interés. En los escritos de Emiliano Mac Donagh, que abarcan desde 1922 hasta 1960 con más de ciento setenta títulos, predominan los trabajos científicos alternando con estudios sobre historia de la biología y de los biólogos, o la preocupación por el cuidado del ambiente y temas relacionados. Sin excepción, aparece la zoología como tema vertebral, ya sea analizando una espina de bagre en la calma del laboratorio, ya sea relatando expediciones zoológicas al interior de nuestro país. Coexisten el detalle mínimo que entrega el microscopio con la aventura a campo abierto, pero el estilo es siempre descriptivo, pegado a la realidad, y despojado de cualquier intento de fantasía que traicionaría el rigor requerido por la ciencia. En los breves relatos aquí presentados, en cambio, el autor escapa de la formalidad, incursiona en un género más liberal en sus normas y deja volar su imaginación y su fino sentido de la ironía. Lo hace sin abandonar el asunto que más le atrae: la naturaleza, y en ella, la vida animal. Si bien los cuentos comparten temas centrales del resto de la producción, aquí no encontramos la exactitud fotográfica ni el análisis desapasionado, sino que la anécdota es imaginada y los escenarios reales se ven transformados por enfoques oníricos. Algunos personajes parecen el fiel retrato de alguien conocido mientras que otros suenan esquemáticos, vacíos. La mirada es humorística y a la vez crítica, gozosa sin dejar de ser analítica. Este período de “autor literario” en vez de “relator científico” dura poco: sólo cinco cuentos en cinco años. En la vasta producción no hay otros intentos de recurrir a la ficción para atraer el interés del público general hacia los admirables y admirados habitantes de las aguas. Quizás podríamos encontrar ecos del monólogo final de El sabio ebrio en el ensayo La belleza de los peces (Revista de Educación, La Plata, 1957) pero en este último el estilo es académico. El cambio de género literario podría sugerir un deseo de cambio vocacional, el cansancio frente a la aparente monotonía y estrictez de los registros científicos. Al plantear el dilema entre observar seres vivos en su medio natural o conservar sus cuerpos para los estudios científicos se insinuaría una encrucijada profesional. En 1930 habrá sido una disyuntiva, aludida en el recurrente contraste entre ambientes cerrados, poblados de frascos, vitrinas y mesas de taxidermia en contraposición con la abierta amplitud de ríos y playas, bosques y cielos. Aludida, también, al atribuir a personajes que las encarnan, dos tipos de sabiduría: una erudita, nacida del estudio, y otra pragmática, forjada en la experiencia. Sin embargo, el tema medular sigue siendo la ictiología: los peces, sus vidas y ámbitos, los nombres que les damos. El nuevo estilo revelaría más bien la intención de jerarquizar los asuntos dilectos envolviéndolos en una forma literaria más libre – y supuestamente más elevada. Creemos captar un latido de euforia, el impulso de compartir la emoción de un descubrimiento, el deseo de conservar la mirada ingenua y la capacidad de asombro ante el maravilloso mundo natural que nos rodea. Que esto se logre más acabadamente por medio de un cuento que a través de un informe, y que la ficción alcance mayor audiencia con la cual compartir la gozosa experiencia del conocimiento, son las cuestiones que nos deja pendientes este naturalista que – por breve tiempo – se volvió cuentista. Mary Mac Donagh de von Reichenbach

Mitochondrial cytochrome b gene sequence diversity in the Korean hare, Lepus coreanus Thomas (Mammalia, Lagomorpha)

Partial sequences of the mitochondrial cytochrome b gene of the Korean hare (Lepus coreanus) were analyzed to determine the degree of genetic diversity. Nine haPlotyes were observed, and the maximum Tamura-Nei nucleotide distance among them was 2.8%, indicating that genetic diversity of L. coreanus is moderate. In order to clarify the Korean hare's taxonomic status and relationship with the Manchurian hare (L. mandshuricus) and the Chinese hare (L. sinensis), these nine haplotypes of the Korean hare were compared with 13 haplotypes from five other species of eastern Asian Lepus including L. mandshwicus and L. sinensis. The Korean hare was distinct in its cytochrome b gene, and it is confirmed that L. coreanus is a valid species, as noted by Jones and Johnson (1965, Univ. Kansas Publ. (Mus. Nat. Hist.) 16:357). Further analyses of mtDNA cytochrome b gene with additional specimens of L. coreanus from North Korea and other species of Lepus from eastern Asia are needed to clarify the taxonomic status of the divergent mtDNA clades of L. mandshuricus and L. sinensis.

亚洲南部球果蝠Sphaerias blanfordi(Thomas,1891)的亚种分化

球果蝠Sphaerias blanfordi(Thomas,1891)是亚洲南部喜马拉雅-印度支那地区的特有种,甚为罕见而少有报道.曾被认为是单型种,几乎无雄性特征的描述.蔡桂全和张遁治(1980)根据采自西藏东南部墨脱的2只雄性标本订了一亚种一墨脱亚种Sphaerias blanfordi motuoensis,其主要特征是颈下侧有一对灰黄色的圆形毛斑.中国科学院昆明动物研究所先后在云南西北部高黎贡山地区采获25号标本(9♂♂,16♀♀),发现球果蝠两性在外形上有明显的性别差异,雄性的颈下侧有一对圆形、灰黄色的刷状毛斑,但雌性均无;对比墨脱标本,认为墨脱亚种的鉴别特征不可靠,亚种不能成立.Lunde(2003)曾报道采自越南北部Mt.Tay Con Linh Ⅱ地区的43号标本,其前臂长和上犬齿外宽明显与印度、缅甸和云南西北部高黎贡山地区的标本不同,可能是真正的地理亚种.

Geographic variation of the Anderson's Niviventer (Niviventer andersoni) (Thomas, 1911) (Rodentia: Muridae) of two new subspecies in China verified with cranial morphometric variables and pelage characteristics

A total of 66 specimens of Niviventer andersoni with intact skulls was investigated on pelage characteristics and cranial morphometric variables. The data were subjected to principal component analyses as well as to discriminant analyses, and measurement

RBAC与MAC在多级关系数据库中的综合模型

多级安全数据库的安全策略需要各种模型来表达,访问控制模型是其中之一.强制访问控制(MAC)模型保证多级数据库中的信息流动符合系统的安全策略.利用基于角色的访问控制(RBAC)来实现MAC能方便多级安全数据库的权限管理.提出了一种MAC与RBAC的综合模型,定义了多级角色与内部角色的概念,并给出了综合模型中经过修改后的操作,使得系统能自动地完成符合强制访问控制策略的用户权限的管理.该模型方便了管理员的权限管理,适合用户较多,安全层次比较复杂的多级关系数据库系统.最后给出了模型的部分实现机制.

XOR-MAC消息认证码的安全性新证明

消息认证码(Message Authentication Codes,MACs)是保证消息完整性的重要工具.Bellare等人提出了称为XOR-MAC的消息认证码,界定了攻击者成功伪造的概率,从而证明了其安全性,但是他们给出的证明方法较为复杂.本文使用Game-Playing技术采用新的安全性定义证明了XOR-MAC的安全性,证明方法简单明了;在底层所使用的分组密码是伪随机置换的假设下,量化了该消息认证码与随机函数之间区分的概率.