Biological characteristics of barley stripe-mosaic virus strains and their evolution /

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Sequence diversity in the coat protein coding region of the genome RNA of Johnsongrass mosaic virus in Australia

Sequence diversity in the coat protein coding region of Australian strains of Johnsongrass mosaic virus (JGMV) was investigated. Field isolates were sampled during a seven year period from Johnsongrass, sorghum and corn across the northern grain growing region. The 23 isolates were found to have greater than 94% nucleotide and amino acid sequence identity. The Australian isolates and two strains from the U.S.A. had about 90% nucleotide sequence identity and were between 19 and 30% different in the N-terminus of the coat protein. Two amino acid residues were found in the core region of the coat protein in isolates obtained from sorghum having the Krish gene for JGMV resistance that differed from those found in isolates from other hosts which did not have this single dominant resistance gene. These amino acid changes may have been responsible for overcoming the resistance conferred by the Krish gene for JGMV resistance in sorghum. The identification of these variable regions was essential for the development of durable pathogen-derived resistance to JGMV in sorghum.

CHARACTERIZATION OF TOBACCO MOSAIC VIRUS DIRECTED REPROGRAMMING OF PHLOEM GENE EXPRESSION TO PROMOTE VIRAL PHLOEM LOADING AND SYSTMEIC MOVEMENT

Vascular phloem loading has long been recognized as an essential step in the establishment of a systemic virus infection. Yet little is known about this process and the mechanisms that control it. In this study, an interaction between the replication protein of Tobacco mosaic virus (TMV) and phloem specific auxin/indole acetic acid (Aux/IAA) transcriptional regulators was found to modulate virus phloem loading. Promoter expression studies show TMV 126/183 kDa interacting Aux/IAAs predominantly express and accumulate within the nuclei of phloem companion cells (CC). Furthermore, CC Aux/IAA nuclear localization is disrupted upon infection with an interacting virus but not during infection with a non-interacting virus. In situ analysis of virus spread shows the inability of TMV variants to disrupt Aux/IAA CC nuclear localization correlates with a reduced ability to load into the vascular tissue. Subsequent systemic movement assays also demonstrate that a virus capable of disrupting Aux/IAA localization is significantly more competitive at systemic movement than a non-interacting virus. Similarly, CC expression and over-accumulation of a degradation-resistant-interacting Aux/IAA protein was found to selectively inhibit TMV accumulation and phloem loading. Transcriptional expression studies demonstrate a role for interacting Aux/IAA proteins in the regulation of salicylic acid and jasmonic acid dependent host defense responses as well as virus specific movement factors including pectin methylesterase that are involved in regulating plasmodesmata size exclusion limits and promoting virus cell-to-cell movement. Further characterization of the phloem environment was done using two phloem specific promoters (pSUC2 and pSULTR2;2) to generate epitope-tagged polysomal-RNA complexes. Immuno-purification using the epitope tag allowed us to obtain mRNAs bound to polysomes (the translatome) specifically in phloem tissue. We found the phloem translatome is uniquely altered during TMV infection with 90% and 88% of genes down regulated in the pSUC2 and pSULTR2;2 phloem translatomes, compared to 31% of genes down regulated in the whole plant p35S translatome. Transcripts down regulated in phloem include genes involved in callose deposition at plasmodesmata, host defense responses, and RNA silencing. Combined, these findings indicate TMV reprograms gene expression within the vascular phloem as a means to enhance phloem loading and systemic spread.

Aplicações biotecnológicas do supressor de silenciamento de cucumber mosaic virus

Tese de Doutoramento, Ciências Agrárias, Faculdade de Ciências e Tecnologia, Universidade do Algarve, 2015

Interception of Wheat mosaic virus (WMoV) in Brazil in maize seeds from the United States.

2016

Identification and effects of mixed infection of Potyvirus isolates with Cucumber mosaic virus in cucurbits.

Mixed infections in cucurbits are frequently observed in natural conditions between viruses from the Potyvirus genus and Cucumber mosaic virus (CMV), which significantly decreases productivity. The objectives of the present study was to compare the host range of PRSV-W, WMV, and ZYMV isolates and evaluate the effects of mixed infections with CMV in zucchini plants (Cucurbita pepo L.). Host range studies comprising 23 plant species confirmed some similarities and biological differences among the isolates of PRSV-W, ZYMV, and WMV. RT-PCR confirmed the amplification of DNA fragments of the PRSV-W, WMV, and ZYMV coat protein gene (cp) and cytoplasm inclusion gene (ci). The virus interaction studies in zucchini Caserta plants indicated synergistic interactions, particularly among species from the Potyvirus genus, and some CMV interference with some virus combinations.

Detecção de Cucumber mosaic virus do subgrupo- IB em feijão-de-metro no estado do Pará.

O feijão-de-metro é uma hortaliça amplamente cultivada nos municípios da região metropolitana de Belém. Diversas doenças podem comprometer a sua produtividade, dentre elas as viroses. Recentemente, foi detectado o Cucumber mosaic virus (CMV) em vagens de feijão-de-metro provenientes do município de Castanhal-PA. Este trabalho teve como objetivo identificar o subgrupo do CMV detectado em vagens de feijão-de-metro, por meio de RT-PCR, sequenciamento do ácido nucléico e análise utilizando o programa Blast, ClustalW e MEGA 7.0. Para isso, foi feita a extração de ácidos nucleicos total a partir de folhas de fumo inoculado com o isolado. Posteriormente, foi realizado o RT-PCR utilizando os primers específicos (CMV-CPR e CMV-CPF). A partir da análise da filogenia foi observado que o isolado formou um clado com os acessos do subgrupo IB de CMV.

Detecção de Cowpea aphid-borne mosaic virus em feijão-de-porco no estado do Pará.

O feijão-de-porco é uma leguminosa utilizada em recuperação e recobrimento do solo e controle de plantas invasoras, por possuir efeito alelopático sobre outras espécies de plantas. A sua produtividade pode ser afetada por doenças, entre elas destacam-se as causadas por vírus. Em Altamira-PA, no campo experimental da Embrapa, observou-se plantas de feijão-de-porco apresentando os sintomas característicos de viroses como o mosaico, nanismo e deformação foliar. Assim, o objetivo deste trabalho foi identificar a espécie de vírus em amostras de feijão-de-porco. Para isso, as amostras foliares foram avaliadas utilizando os testes ELISA e em sequida o de RT-PCR com primers específicos para CABMV (CABMV-F e CABMV-R). No teste de RT-PCR obteve-se a banda esperada de 221 pb correspondente à parte do gene da capa proteica do vírus CABMV. Este foi o primeiro relato de CABMV em feijão-de-porco no Estado do Pará.

Biological and molecular characterization of a highly divergent johnsongrass mosaic virus isolate from Pennisetum purpureum.

2016

Avaliação da resistência a tobamovirus em acessos de Capsicum spp.

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Tobamovírus em Capsicum spp. no Estado de São Paulo: ocorrência, análise da variabilidade e avaliação de resistência

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Ocorrência de begomovírus de plantas de pimentão no Estado de São Paulo e comportamento de genótipos de Capsicum spp. ao tomato severe rugose virus e a Bemisia tabaci meam1

Pós-graduação em Agronomia (Proteção de Plantas) - FCA