Total Synthesis of the Potent HIF-1 Inhibitory Antitumor Natural Product, (8R)-Mycothiazole, via Baldwin–Lee CsF/CuI sp3–sp2-Stille Cross-Coupling. Confirmation of the Crews Reassignment

A convenient asymmetric total synthesis of the potent HIF-1 inhibitory antitumor natural product, (−)- or (+)-(8R)-mycothiazole (1), is described. Not only does our synthesis confirm the 2006 structural reassignment made by Crews (Crews, P., et al. J. Nat. Prod. 2006, 69, 145), it revises the [α]_D data previously reported for this molecule in MeOH from −13.7° to +42.3°. The newly developed route to (8R)-1 sets the C(8)–OH stereocenter via Sharpless AE/2,3-epoxy alcohol reductive ring opening and utilizes two Baldwin–Lee CsF/cat. CuI Stille cross-coupling reactions with vinylstannanes 8 and 3 to efficiently elaborate the C(1)–C(4) and C(14)–C(18) sectors.

Evaluation of neuroprotective potential of plyphenols derived from Portuguese native plants: Juniperus sp. and Rubus sp.

Dissertation presented to obtain the Ph.D degree in Biochemistry

Biological coagulation of skim latex using Acinetobacter sp. isolated from natural rubber latex centrifugation effluent

An Acinetobacter sp, isolated from latex centrifugation effluent, effectively coagulated skim rubber from skim latex. After coagulation for 48 h without the addition of any nutrients, at an optimum dilution of 1:10(v/v) and with an inoculum concentration of 6.4 mg dry cell /ml, the yield of the skim rubber was 8 % (w/v) and the COD of the residual solution was only 0.4 g/l. chemical coagulation at the same dilution resulted in 7 % (w/v) yield of dry rubber content and 2.2 g COD /l.

Separation of natural colorants from the fermented broth of filamentous fungi using colloidal gas aphrons

There is a worldwide interest in the development of processes for producing colorants from natural sources. Microorganisms provide an alternative source of natural colorants produced by cultivation technology and extracted from the fermented broth. The aim of the present work was to study the recovery of red colorants from the fermented broth of Talaromyces amestolkiae using the technique of colloidal gas aphrons (CGA) comprising surfactant-stabilized microbubbles. Preliminary experiments were performed to evaluate the red colorants’ solubility in different organic solvents, octanol/water partitioning, and their stability in surfactant solutions, namely hexadecyl trimethylammonium bromide (CTAB), sodium dodecyl sulfate (SDS), and polyoxyethylenesorbitan monolaurate (Tween 20), which are cationic, anionic and nonionic surfactants, respectively. The first recovery experiments were carried out using CGA generated by these surfactants at different volumetric ratios (VR, 3–18). Subsequently, two different approaches to generate CGA were investigated at VR values of 6 and 12: the first involved the use of CTAB at pH 6.9–10.0, and the second involved the use of Tween 20 using red colorants partially dissolved in ethanol and Tween 20. The characterization results showed that red colorants have a hydrophilic nature. The highest recoveries were obtained with Tween 20 (78%) and CTAB (70%). These results demonstrated that the recovery of the colorants was driven by both electrostatic and hydrophobic interactions. The VR was found to be an important operating parameter and at VR 12 with CTAB (at pH 9) maximum recovery, partitioning coefficient (K = 5.39) and selectivity in relation to protein and sugar (SP = 3.75 and SS = 7.20 respectively) were achieved. Furthermore, with Tween 20, the separation was driven mainly by hydrophobic interactions. Overall CGA show promise for the recovery of red colorants from a fermented broth. Although better results were obtained with CTAB than with Tween 20 the latter may be more suitable for some application due to its lower toxicity.

Natural Plasmodium infections in Brazilian wild monkeys: Reservoirs for human infections?

Four hundred and forty-eight samples of total blood from wild monkeys living in areas where human autochthonous malaria cases have been reported were screened for the presence of Plasmodium using microscopy and PCR analysis. Samples came from the following distinct ecological areas of Brazil: Atlantic forest (N = 140), semideciduous Atlantic forest (N = 257) and Cerrado (a savannah-like habitat) (N = 51). Thick and thin blood smears of each specimen were examined and Plasmodium infection was screened by multiplex polymerase chain reaction (multiplex PCR). The frequency of Plasmodium infections detected by PCR in Alouatta guariba clamitans in the Sao Paulo Atlantic forest was 11.3% or 8/71 (5.6% for Plasmodium malariae and 5.6% for Plasmodium vivax) and one specimen was positive for Plasmodium falciparum (1.4%); Callithrix sp. (N = 30) and Cebus apella (N = 39) specimens were negative by PCR tests. Microscopy analysis was negative for all specimens from the Atlantic forest. The positivity rate for Alouatta caraya from semideciduous Atlantic forest was 6.8% (16/235) in the PCR tests (5.5, 0.8 and 0.4% for P. malariae, P. falciparum and P. vivax, respectively), while C apella specimens were negative. Parasitological examination of I he samples using thick smears revealed Plasmodium sp. infections in only seven specimens, which had few parasites (3.0%). Monkeys from the Cerrado (a savannah-like habitat) (42 specimens of A. caraya, 5 of Callithrix jacchus and 4 of C. apella) were negative in both tests. The parasitological prevalence of P. vivax and P. malariae in wild monkeys from Atlantic forest and semideciduous Atlantic forest and the finding of a positive result for P.falciparum in Alouatta from both types of forest support the hypothesis that monkeys belonging to this genus could be a potential reservoir. Furthermore, these findings raise the question of the relationship between simian and autochthonous human malaria in extra-Amazonian regions. (C) 2008 Elsevier B.V. All rights reserved.

Natural infection of gastrointestinal nematodes in long-nosed armadillos Dasypus novemcinctus Linnaeus, 1758 from Pantanal wetlands, Aquidauana sub-region, Mato Grosso do Sul State, with the description of Hadrostrongylus speciosum n. gen. et n. sp (Molineidae : Anoplostrongylinae)

This study evaluated the gastrointestinal helminth fauna of long-nosed armadillos, Dasypus novemcinctus, from the Pantanal wetlands, Aquidauana sub-region, Aquidauana County, Mato Grosso do Sul State, Brazil. Thirteen species of nematodes, comprising seven genera and four families, were recovered from their gastrointestinal tracts. The following descriptors of infection were determined: prevalence, variation of intensity, average intensity and abundance. Hadrostrongylus speciosum n. gen. et n. sp. is first described here. (c) 2006 Published by Elsevier B.V.

Uso do solo e análise temporal da ocorrência de vegetação natural na fazenda experimental Edgardia, em Botucatu-SP

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Dinâmica populacional e incidência de moscas-das-frutas e parasitoides em cultivares de pessegueiros (Prunus Persica L. Batsch) no município de presidente prudente-sp

Esta pesquisa teve como objetivos avaliar a dinâmica populacional e registrar a diversidade de moscas-das-frutas (Diptera: Tephritoidea) em cultivares de pessegueiro Tropical, Talismã, Aurora 2, Aurora 1, Dourado 2 e Doçura 2, enxertadas sobre os porta-enxertos 'Okinawa' e Umê, em Presidente Prudente-SP. Foram realizadas as correlações da dinâmica populacional com a temperatura e a precipitação, e também a infestação com as características químicas dos frutos, Sólidos Solúveis e Acidez Titulável. No período de julho de 2004 a dezembro de 2006, a dinâmica populacional de moscas-das-frutas foi obtida através de coletas semanais de moscas-das-frutas em armadilhas McPhail, e a incidência foi determinada através da coleta de 30 frutos/planta/cultivar. O delineamento estatístico adotado foi o inteiramente casualizado, com cinco repetições. Ceratitis capitata foi predominante nas cultivares de pessegueiros estudadas. Não foi observada correlação significativa entre população de moscas-das-frutas e as variáveis de temperatura e precipitação, e sólidos solúveis e ácidez titulável. Entre as cultivares de pêssego, Aurora 2 apresentou maior infestação por C. capitata, da ordem de 22 e 23% nos anos 2004 e 2006, respectivamente. Também foi registrada a incidência de Neosilba spp. em frutos de pêssego. Doryctobracon areolatus (Braconidae), Tetrastichus giffardianus (Eulophidae) e Pachycrepoideus vindemmiae (Pteromalidae) foram recuperados de pupários de Tephritidae.

Efeito do Paclobutrazol no controle da diferenciação floral natural do abacaxizeiro cv. Smooth Cayenne

O abacaxizeiro é uma planta de grande importância econômica, porém seu florescimento natural causa sérios problemas, tornando seu manejo difícil devido à desuniformidade de frutos e colheitas, elevando o custo de produção. O objetivo deste trabalho foi manipular o florescimento do abacaxizeiro, contribuindo para uma produção uniforme colocada no mercado, nos meses de menor oferta. Utilizou-se o Paclobutrazol (PBZ) nas concentrações de 100; 150 e 200 mg L-1, em 2; 3 ou 4 aplicações via foliar, em plantas de abacaxi cv. Smooth Cayenne, no município de Presidente Alves-SP. O delineamento empregado foi em blocos ao acaso, com 10 tratamentos e três repetições, com 40 plantas por parcela experimental. No período de 100 a 150 dias após a primeira aplicação dos tratamentos, efetuaram-se as contagens de inflorescências presentes no centro da roseta foliar das plantas. Todos os tratamentos com Paclobutrazol inibiram a diferenciação floral natural do abacaxizeiro, recomendando-se a concentração de 150 mg L-1 em duas aplicações, com início em abril, a intervalo de 15 dias.

Ecologia da paisagem: mapeamento da vegetação da Reserva Biológica da Serra do Japi, Jundiaí, SP, Brasil

Foi realizado o mapeamento da vegetação da Reserva Biológica (REBIO) Municipal da Serra do Japi, Jundiaí, SP, por meio de fotointerpretação analógica, em escala 1:30.000. O mapa foi digitalizado e transferido para computador pelo sistema de informação geográfica (Idrisi) e posteriormente para o programa Corel Draw. Foram identificadas, mapeadas e descritas oito unidades de paisagem (UP) sendo três antrópicas (solo exposto, campo antrópico e reflorestamento homogêneo) e cinco naturais (floresta estacional semidecidual montana dossel uniforme - microfanerófitos; floresta estacional semidecidual montana dossel uniforme - mesofanerófitos; floresta estacional semidecidual montana dossel emergente; floresta estacional semidecidual aluvial dossel emergente e refúgio montano arbustivo). As unidades naturais somaram 98,46% do total dos 2.071,20 ha da área, indicando que a Reserva vem cumprindo seu papel na preservação do ecossistema em questão. No entanto, como algumas unidades não tem expressiva representatividade na área, e como existe grande extensão de floresta no entorno da Reserva, sugere-se a ampliação e a transformação da mesma em uma unidade que contemple inclusive a visitação pública como forma de auxiliar no processo de conservação. Sugere-se que a área seja transformada em parque estadual, cujo nome poderia ser Parque Estadual da Serra do Japi.

Composição química das águas pluviais e deposição atmosférica anual na bacia do Alto Sorocaba (SP)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Banco de sementes de remanescentes naturais e de áreas reflorestadas em uma várzea do Rio Mogi-Guaçu - SP

Este estudo avaliou qualitativa e quantitativamente o banco de sementes de dois remanescentes florestais, de um povoamento de Eucalyptus robusta e de três áreas de reflorestamento com espécies nativas, localizados em uma várzea do rio Mogi-Guaçu, Luiz Antônio (21°31´S e 47°55´W), Estado de São Paulo, Brasil. Foram usadas 12 parcelas de 10 x 10 m distribuídas sistematicamente em cada área de estudo. em cada parcela foram distribuídas aleatoriamente quatro subparcelas de 0,5 m x 0,5 m. Duas subparcelas foram usadas para coletar a serapilheira e duas para coletar o solo a 0-5 cm de profundidade. A amostragem foi realizada em setembro de 2001, nos remanescentes naturais e no povoamento de eucalipto e, em setembro de 2002, nas áreas reflorestadas. As amostras foram acondicionadas em vasos de plástico e incubadas com irrigações periódicas para a germinação das sementes por um período de sete meses, em dois ambientes de casa de vegetação: um a 100% de luz solar e outro sob tela com 70% de redução de luz solar. Na composição do banco de sementes de todas as áreas amostradas, houve predominância de espécies pioneiras dos primeiros estádios de sucessão. As espécies arbóreas mais importantes foram Aloysia virgata e Cecropia hololeuca. Os reflorestamentos com espécies nativas proporcionaram um banco de sementes com maior diversidade de espécies arbóreas nativas do que o povoamento de eucalipto. Este estudo indicou que a similaridade entre as florestas plantadas e as nativas deverá aumentar ao longo do tempo.

Isolamento de fungos produtores de ácido γ-linolênico de solo da Estação Ecologica de Juréia-Itatins, SP

Fungi producing γ-linolenic acid (GLA) were isolated from soil of the Ecological Station of Juréia-Itatins, SP. This essential fatty acid has aroused great interest due to its increasing by applications in pharmaceutical industry. The GLA production by zygomycetous fungi is an alternative way of comparing seed extraction. Thirty-two zygomycetous strains of Mucorales were isolated, most of them belonging to Mucor genus. The GLA production was evaluated after 4 days of incubation at 25°C on a rotary shaker at 150 rpm in medium containing 2% glucose, and 1% yeast extract, following new medium addition (20%) and incubation for an additional period of 3 days at 12°C, without agitation. The GLA production varied according to the microorganism and the strain.

Uso da fitossociologia na avaliação da efetividade da restauração florestal em uma várzea degradada do rio Mogi Cuaçu, SP

This study objective was to evaluate the effective revegetation in a Mogi Guaçu River degraded floodplain area, located at Luiz Antonio municipality (21° 31' S e 47° 55' W), São Paulo State, Brazil. Two native riparian forest remnants (RIP1 and RIP2) and three 10-year-old reforested areas, planted of native species (R1, R2 and R3), were analyzed by using phytosociological describers of the arboreal stratum (trees with DBH ≥ 5 cm) as indicators. The arboreal stratum inventory was accomplished by 180 plots (10 × 10 m each), 60 representing every native forest and 20 for every reforested area. A total of 60 arboreal species was recorded, only six species (Cecropia hololeuca, Crotón urucurana, Genipa americana, Inga striata, Nectandra megapotamica e Peltophorum dubium) occurring in all the five studied areas. Seventeen species were common to both native forests, and nine species were recorded in all the reforested areas. Sebastlania commersonlana and Guarea macrophyllawere recorded in the native forests (RlP1 and RIP2), and Cecropia hololeuca, Croton urucurana and Inga striata occurring in all the reforested areas, were the species that best characterize the physiognomy of local diversity and were the most important among the studied species. The results showed that the rehabilitation of the areas made by the reforestation created conditions to implant forests with similar structures of the adjacent natural remainders. The reforestation with native species performed in the degraded floodplain of Mogi Guaçu River, initially with the predomination of invasive grasses, has been effective at the first stage of the ecological restoration process. The reforestation is making possible the natural regeneration of species from the adjacent remnants, what indicates that the similarity between planted forests and the native ones are rising through the time. The phytosociology, accomplished ten years after the planting date, is adequate to evaluate the effectiveness of the reforestation during the restoration process of degradated areas in the Mogi Guaçu floodplain.

Análise geoambiental da região de marília, SP: Suscetibilidade a processos erosivos frente ao histórico de ocupação da área

The study area comprises the western portion of the Marília Plateau, State of São Paulo, southeastern Brazil. The geological substrate encompasses Cretaceous sedimentary rocks of the Bauru Group and local Neocenozoic units like colluvium aprons, fluvial terrace deposits, in situ regoliths, and modern alluvial deposits. In a geomorphologic sense, the study area might be characterized as showing two main pediplanes, viz. P1 Surface (upper) and P2 Surface (lower), both surfaces are presently under dissecation processes. After the 1920's the expansion of the railroad system fostered the removal of the natural vegetation, which in turn was followed by the introduction of coffee, peanut, corn and cotton crops. This intense exploitation was conducted without respect to the soil carrying capacity and its natural susceptibility to erosional processes, including an aggressive form known as voçoroca. As a result, the study shows that the most susceptible material includes colluvium aprons, in situ regoliths, and colluvium-alluvium or alluvium deposits. The most critical situation is in the P2 Surface context, near the bottom of the Marília Plateau scarpment, where surface runoff can be very strong. Another point of active erosion is represented by the exposed walls of gullies and voçorocas, mainly in fluvial reaches subjected to talweg lowering. In a general sense, this study shows current evidence of erosional stability due to the ìntroduction of pastures as a predominant type of land occupation and to a series of erosion control procedures. Among these actions are terrace implantation, construction of small pits for runoff control, natural or induced reforestation by land owners. Despite these efforts, some erosion points remain chiefly in steeper country roads and trail stretches, in areas of concentration of cattle tracks (e.g., near cattle ponds), gullies or voçorocas exposed walls, and badly planned urbanization. The permanence of these erosion points demonstrates the necessity of a continuous monitoring of surface dynamics as well as a rapid and effective intervining measures of erosion and/or silting control.