Functional and Evolutionary Insights from the Genomes of Three Parasitoid Nasonia Species

We report here genome sequences and comparative analyses of three closely related parasitoid wasps: Nasonia vitripennis, N. giraulti, and N. longicornis. Parasitoids are important regulators of arthropod populations, including major agricultural pests and disease vectors, and Nasonia is an emerging genetic model, particularly for evolutionary and developmental genetics. Key findings include the identification of a functional DNA methylation tool kit; hymenopteran-specific genes including diverse venoms; lateral gene transfers among Pox viruses, Wolbachia, and Nasonia; and the rapid evolution of genes involved in nuclear-mitochondrial interactions that are implicated in speciation. Newly developed genome resources advance Nasonia for genetic research, accelerate mapping and cloning of quantitative trait loci, and will ultimately provide tools and knowledge for further increasing the utility of parasitoids as pest insect-control agents.

FibroTest is an independent predictor of virologic response in chronic hepatitis C patients retreated with pegylated interferon alfa-2b and ribavirin in the EPIC(3) program

Background & Aims: EPIC-3 is a prospective, international study that has demonstrated the efficacy of PEG-IFN alfa-2b plus weight-based ribavirin in patients with chronic hepatitis C and significant fibrosis who previously failed any interferon-alfa/ribavirin therapy. The aim of the present study was to assess FibroTest (FT), a validated non-invasive marker of fibrosis in treatment-naive patients, as a possible alternative to biopsy as the baseline predictor of subsequent early virologic (EVR) and sustained virologic response (SVR) in previously treated patients. Methods: Of 2312 patients enrolled, 1459 had an available baseline FT, biopsy, and complete data. Uni- (UV) and multi-variable (MV) analyses were performed using FT and biopsy. Results: Baseline characteristics were similar as in the overall population; METAVIR stage: 28% F2, 29% F3, and 43% F4, previous relapsers 29%, previous PEG-IFN regimen 41%, high baseline viral load (BVL) 64%. 506 patients (35%) had undetectable HCV-RNA at TW12 (TW12neg), with 58% achieving SVR. The accuracy of FT was similar to that in naive patients: AUROC curve for the diagnosis of F4 vs F2 = 0.80 (p<0.00001). Five baseline factors were associated (p<0.001) with SVR in UV and MV analyses (odds ratio: UV/MV): fibrosis stage estimated using FT (4.5/5.9) or biopsy (1.5/1.6), genotype 2/3 (4.5/5.1), BVL (1.5/1.3), prior relapse (1.6/1.6), previous treatment with non-PEG-IFN (2.6/2.0). These same factors were associated (p <= 0.001) with EVR. Among patients TW12neg, two independent factors remained highly predictive of SVR by MV analysis (p <= 0.001): genotype 2/3 (odds ratio = 2.9), fibrosis estimated with FT (4.3) or by biopsy (1.5). Conclusions: FibroTest at baseline is a possible non-invasive alternative to biopsy for the prediction of EVR at 12 weeks and SVR, in patients with previous failures and advanced fibrosis, retreated with PEG-IFN alfa-2b and ribavirin. (C) 2010 European Association for the Study of the Liver. Published by Elsevier B.V. All rights reserved.

Peginterferon alfa-2b and Ribavirin: Effective in Patients With Hepatitis C Who Failed Interferon alfa/Ribavirin Therapy

Background & Aims: Treatment with peginterferon alfa and ribavirin produces a sustained virologic response (SVR) in approximately 60% of hepatitis C virus (HCV)-infected patients. Alternate options are needed for patients who relapse or do not respond to therapy. Methods: This prospective, international, multicenter, open-label study evaluated efficacy and safety of peginterferon alfa-2b (1.5 mu g/kg/wk) plus weight-based ribavirin (800-1400 mg/day) in 2333 chronic HCV-infected patients with significant fibrosis/cirrhosis whose previous interferon alfa/ribavirin therapy failed. Patients with undetectable HCV-RNA at treatment week (TW) 12 received 48 weeks of therapy; patients with detectable HCV-RNA at TW12 could enter maintenance studies at TW18; 188 patients with low/detectable HCV-RNA at TW12 continued therapy at the investigator`s request. Results: Overall, 22% of the patients attained SVR (56% with undetectable HCV-RNA and 12% with low/detectable HCV-RNA at TW12). SVR was better in relapsers (38%) than nonresponders (14%), regardless of previous treatment, and in patients previously treated with interferon-alfa/ribavirin (25%) than peginterferon alfa-ribavirin (17%). Predictors of response in patients with undetectable HCV-RNA at TW12 were genotype (2/3 vs 1, respectively; odds ratio [OR] 2.4; P < .0001), fibrosis score (F2 vs F4; OR, 2.2; F3 vs F4; OR, 1.7; P < .0001), and baseline viral load (<= 600,000 vs >600,000 IU/mL; OR, 1.4; P = .0223). These factors plus previous treatment and response were overall predictors of SVR. Safety was similar among fibrosis groups. Conclusions: Peginterferon alfa-2b plus weight-based ribavirin is effective and safe in patients who failed interferon alfa/ribavirin therapy. Genotype, baseline viral load, and fibrosis stage were predictors of response.

Alterations in myocardial gene expression associated with experimental Trypanosoma cruzi infection

Chagas disease, characterized by acute myocarditis and chronic cardiomyopathy, is caused by infection with the protozoan parasite Trypanosoma cruzi. We sought to identify genes altered during the development of parasite-induced cardiomyopathy. Microarrays containing 27,400 sequence-verified mouse cDNAs were used to analyze global gene expression changes in the myocardium of a murine model of chagasic cardiomyopathy. Changes in gene expression were determined as the acute stage of infection developed into the chronic stage. This analysis was performed on the hearts of male CD-1 mice infected with trypomastigotes of T. cruzi (Brazil strain). At each interval we compared infected and uninfected mice and confirmed the microarray data with dye reversal. We identified eight distinct categories of mRNAs that were differentially regulated during infection and identified dysregulation of several key genes. These data may provide insight into the pathogenesis of chagasic cardiomyopathy and provide new targets for intervention. (c) 2008 Elsevier Inc. All rights reserved.

A redescription of Homalometron senegalense Fischthal & Thomas, 1972 (Digenea : Apocreadiidae) from Synaptura kleinii (Teleostei) of the western Mediterranean

The apocreadiid digenean Homalometron senegalense is redescribed from the soleid fish Synaptura kleinii from off Corsica in the western Mediterranean. For the first time, lymphatic vessels are described for this species, and the implications of this in the systematics of the Apocreadiidae discussed. This species is considered closest to H. galaicus and H. wrightae, both also reported from soleid hosts. The concept of Apocreadiidae espoused is that most recently developed by Cribb & Bray (1999).

Fitting mixtures of Kent distributions to aid in joint set identification

When examining a rock mass, joint sets and their orientations can play a significant role with regard to how the rock mass will behave. To identify joint sets present in the rock mass, the orientation of individual fracture planer can be measured on exposed rock faces and the resulting data can be examined for heterogeneity. In this article, the expectation-maximization algorithm is used to lit mixtures of Kent component distributions to the fracture data to aid in the identification of joint sets. An additional uniform component is also included in the model to accommodate the noise present in the data.

'The utility of human security': Which humans? What security? A reply to Thomas & Tow

Thomas & Tow's evaluation of the utility of human security is an important contribution to an ongoing debate about what security is and for whom security should be provided. In particular, the authors' engagement with the human security agenda is important given the centrality of this approach to recent attempts to rethink security. This article argues, however, that Thomas & Tow's approach to the human security agenda is problematic for two central reasons. First, their attempt to narrow security to make this approach amenable to state policymakers risks reifying the sources of insecurity for individuals everywhere. Second, the conception of human security they put forward appears largely inconsistent with the normative concerns inherent in the human security agenda.

Gloria o maldición del individualismo moderno según Louis Dumont

Este artículo discute la noción de individualismo en Louis Dumont, partiendo sobretodo de una reconstitución del encuentro entre sus perspectivas metodológica -- que tiene como base el estudio antropológico de la civilización indiana -- y teórica, referida a la relación entre individuo y sociedad en una llave propiamente maussiana. Por el hecho de saberse que Dumont se utiliza de un abordaje al mismo tiempo comparativo y estructural, lo que se busca es mostrar que el individualismo, al mismo tiempo que se presenta ideologicamente como opuesto a la jerarquía típica de sistemas como las casta indianas, mantiene propiedades lógicas semejantes, en lo que se refiere a la relación entre los valores y las prácticas sociologicamente "englobadas" y veladas. De este modo es posible entender, a partir de este pensamiento, como en el interior del mismo sistema individualista -- liberal e igualitario -- hay espacio para ideologías totalitarias y racistas, como perversiones jerárquicas que trabajan la desigualdad en planos sociologicamente asimétricos como la "naturaleza".

Variações nos níveis das células sangüíneas periféricas encontradas em Holochilus brasiliensis nanus Thomas, 1897, infectados com Schistosoma mansoni Sambon, 1907, próprio da Pré-Amazônia

Foram constituídos quatro grupos de roedores silvestres para a contagem de células sangüíneas periféricas, da seguinte forma: Grupo I - formado de animais normais, nascidos em biotério, com 30 dias de vida; Grupo II - formado de animais que foram capturados no campo e considerados não infectados com S. mansoni, após ovohelmintoscopia das fezes, realizada durante 30 dias de observação; Grupo III - animáis capturados no campo, nautralmente infectados com o esquistossomo, e o Grupo IV - de animais nascidos em biotério, com 30 dias de vida, e infectados com 150 cercárias de S. mansoni, oriundas da Região da Baixada Maranhense. Semanalmente, a partir da data da infecção, estes animais foram sangrados e tiveram suas células sangüíneas periféricas contadas global e especificamente. Os resultados mostraram que o número de hemácias e leucócitos por mm³ não variou nos animais normais, tanto de campo como de biotério. No grupo de animais experimentalmente infectados, foi observado decréscimo do número de hemácias à proporção que a infecção evoluia. Comportamento oposto foi verificado com os leucócitos. Elevados níveis de eosinófilos só foram observados nos animais com infecção natural. Estes resultados foram discutidos com dados da literatura e considerados importantes para complementar as informações sobre este hospedeiro natural do trematódeo, oferecido como modelo experimental do verme, e para sua própria história natural.