Calculating the exclusion probability and paternity index for X-chromosomal loci in the presence of substructure

There has been recent interest in the use of X-chromosomal loci for forensic and relatedness testing casework, with many authors developing new X-linked short tandem repeat (STR) loci suitable for forensic use. Here we present formulae for two key quantities in paternity testing, the average probability of exclusion and the paternity index, which are suitable for Xchromosomal loci in the presence of population substructure.

The expected performance of single nucleotide polymorphism loci in paternity testing

We discuss the utility of single nucleotide polymorphism loci for full trio and mother-unavailable paternity testing cases, in the presence of population substructure and relatedness of putative and actual fathers. We focus primarily on the expected number of loci required to gain specified probabilities of mismatches, and report the expected proportion of paternity indices greater than three threshold values for these loci. (c) 2004 Elsevier Ireland Ltd. All rights reserved.

Validation of short tandem repeat analysis for the investigation of cases of disputed paternity

This study details validation of two separate multiplex STR systems for use in paternity investigations. These are the Second Generation Multiplex (SGM) developed by the UK Forensic Science Service and the PowerPlex 1 multiplex commercially available from Promega Inc. (Madison, WI, USA). These multiplexes contain 12 different STR systems (two are duplicated in the two systems). Population databases from Caucasian, Asian and Afro-Caribbean populations have been compiled for all loci. In all but two of the 36 STR/ethnic group combinations, no evidence was obtained to indicate inconsistency with Hardy-Weinberg (HW) proportions. Empirical and theoretical approaches have been taken to validate these systems for paternity testing. Samples from 121 cases of disputed paternity were analysed using established Single Locus Probe (SLP) tests currently in use, and also using the two multiplex STR systems. Results of all three test systems were compared and no non-conformities in the conclusions were observed, although four examples of apparent germ line mutations in the STR systems were identified. The data was analysed to give information on expected paternity indices and exclusion rates for these STR systems. The 12 systems combined comprise a highly discriminating test suitable for paternity testing. 99.96% of non-fathers are excluded from paternity on two or more STR systems. Where no exclusion is found, Paternity Index (PI) values of > 10,000 are expected in > 96% of cases.

Relatedness testing in subdivided populations

Assigning probabilities to alleged relationships, given DNA profiles, requires, among other things, calculation of a likelihood ratio (LR). Such calculations usually assume independence of genes: this assumption is not appropriate when the tested individuals share recent ancestry due to population substructure. Adjusted LR formulae, incorporating the coancestry coefficient F(ST), are presented here for various two-person relationships, and the issue of mutations in parentage testing is also addressed.

Moisture can be the dominant environmental parameter governing cadaver decomposition in soil

Forensic taphonomy involves the use of decomposition to estimate postmortem interval (PMI) or locate clandestine graves. Yet, cadaver decomposition remains poorly understood, particularly following burial in soil. Presently, we do not know how most edaphic and environmental parameters, including soil moisture, influence the breakdown of cadavers following burial and alter the processes that are used to estimate PMI and locate clandestine graves. To address this, we buried juvenile rat (Rattus rattus) cadavers (∼18 g wet weight) in three contrasting soils from tropical savanna ecosystems located in Pallarenda (sand), Wambiana (medium clay), or Yabulu (loamy sand), Queensland, Australia. These soils were sieved (2 mm), weighed (500 g dry weight), calibrated to a matric potential of -0.01 megapascals (MPa), -0.05 MPa, or -0.3 MPa (wettest to driest) and incubated at 22 °C. Measurements of cadaver decomposition included cadaver mass loss, carbon dioxide-carbon (CO2-C) evolution, microbial biomass carbon (MBC), protease activity, phosphodiesterase activity, ninhydrin-reactive nitrogen (NRN) and soil pH. Cadaver burial resulted in a significant increase in CO2-C evolution, MBC, enzyme activities, NRN and soil pH. Cadaver decomposition in loamy sand and sandy soil was greater at lower matric potentials (wetter soil). However, optimal matric potential for cadaver decomposition in medium clay was exceeded, which resulted in a slower rate of cadaver decomposition in the wettest soil. Slower cadaver decomposition was also observed at high matric potential (-0.3 MPa). Furthermore, wet sandy soil was associated with greater cadaver decomposition than wet fine-textured soil. We conclude that gravesoil moisture content can modify the relationship between temperature and cadaver decomposition and that soil microorganisms can play a significant role in cadaver breakdown. We also conclude that soil NRN is a more reliable indicator of gravesoil than soil pH.

Freezing skeletal muscle tissue does not affect its decomposition in soil: Evidence from temporal changes in tissue mass, microbial activity and soil chemistry based on excised samples

The study of decaying organisms and death assemblages is referred to as forensic taphonomy, or more simply the study of graves. This field is dominated by the fields of entomology, anthropology and archaeology. Forensic taphonomy also includes the study of the ecology and chemistry of the burial environment. Studies in forensic taphonomy often require the use of analogues for human cadavers or their component parts. These might include animal cadavers or skeletal muscle tissue. However, sufficient supplies of cadavers or analogues may require periodic freezing of test material prior to experimental inhumation in the soil. This study was carried out to ascertain the effect of freezing on skeletal muscle tissue prior to inhumation and decomposition in a soil environment under controlled laboratory conditions. Changes in soil chemistry were also measured. In order to test the impact of freezing, skeletal muscle tissue (Sus scrofa) was frozen (−20 °C) or refrigerated (4 °C). Portions of skeletal muscle tissue (∼1.5 g) were interred in microcosms (72 mm diameter × 120 mm height) containing sieved (2 mm) soil (sand) adjusted to 50% water holding capacity. The experiment had three treatments: control with no skeletal muscle tissue, microcosms containing frozen skeletal muscle tissue and those containing refrigerated tissue. The microcosms were destructively harvested at sequential periods of 2, 4, 6, 8, 12, 16, 23, 30 and 37 days after interment of skeletal muscle tissue. These harvests were replicated 6 times for each treatment. Microbial activity (carbon dioxide respiration) was monitored throughout the experiment. At harvest the skeletal muscle tissue was removed and the detritosphere soil was sampled for chemical analysis. Freezing was found to have no significant impact on decomposition or soil chemistry compared to unfrozen samples in the current study using skeletal muscle tissue. However, the interment of skeletal muscle tissue had a significant impact on the microbial activity (carbon dioxide respiration) and chemistry of the surrounding soil including: pH, electroconductivity, ammonium, nitrate, phosphate and potassium. This is the first laboratory controlled study to measure changes in inorganic chemistry in soil associated with the decomposition of skeletal muscle tissue in combination with microbial activity.

Does repeated burial of skeletal muscle tissue (Ovis aries) in soil affect subsequent decomposition?

The repeated introduction of an organic resource to soil can result in its enhanced degradation. This phenomenon is of primary importance in agroecosystems, where the dynamics of repeated nutrient, pesticide, and herbicide amendment must be understood to achieve optimal yield. Although not yet investigated, the repeated introduction of cadaveric material is an important area of research in forensic science and cemetery planning. It is not currently understood what effects the repeated burial of cadaveric material has on cadaver decomposition or soil processes such as carbon mineralization. To address this gap in knowledge, we conducted a laboratory experiment using ovine (Ovis aries) skeletal muscle tissue (striated muscle used for locomotion) and three contrasting soils (brown earth, rendzina, podsol) from Great Britain. This experiment comprised two stages. In Stage I skeletal muscle tissue (150 g as 1.5 g cubes) was buried in sieved (4.6 mm) soil (10 kg dry weight) calibrated to 60% water holding capacity and allowed to decompose in the dark for 70 days at 22 °C. Control samples comprised soil without skeletal muscle tissue. In Stage II, soils were weighed (100 g dry weight at 60% WHC) into 1285 ml incubation microcosms. Half of the soils were designated for a second tissue amendment, which comprised the burial (2.5 cm) of 1.5 g cube of skeletal muscle tissue. The remaining half of the samples did not receive tissue. Thus, four treatments were used in each soil, reflecting all possible combinations of tissue burial (+) and control (−). Subsequent measures of tissue mass loss, carbon dioxide-carbon evolution, soil microbial biomass carbon, metabolic quotient and soil pH show that repeated burial of skeletal muscle tissue was associated with a significantly greater rate of decomposition in all soils. However, soil microbial biomass following repeated burial was either not significantly different (brown earth, podsol) or significantly less (rendzina) than new gravesoil. Based on these results, we conclude that enhanced decomposition of skeletal muscle tissue was most likely due to the proliferation of zymogenous soil microbes able to better use cadaveric material re-introduced to the soil.

Temperature affects microbial decomposition of cadavers (Rattus rattus) in contrasting soils

The ecology of soils associated with dead mammals (i.e. cadavers) is poorly understood. Although temperature and soil type are well known to influence the decomposition of other organic resource patches, the effect of these variables on the degradation of cadavers in soil has received little experimental investigation. To address this, cadavers of juvenile rats (Rattus rattus) were buried in one of three contrasting soils (Sodosol, Rudosol, and Vertosol) from tropical savanna ecosystems in Queensland, Australia and incubated at 29 °C, 22 °C, or 15 °C in a laboratory setting. Cadavers and soils were destructively sampled at intervals of 7 days over an incubation period of 28 days. Measurements of decomposition included cadaver mass loss, carbon dioxide–carbon (CO2–C) evolution, microbial biomass carbon (MBC), protease activity, phosphodiesterase activity, and soil pH, which were all significantly positively affected by cadaver burial. A temperature effect was observed where peaks or differences in decomposition that at occurred at higher temperature would occur at later sample periods at lower temperature. Soil type also had an important effect on some measured parameters. These findings have important implications for a largely unexplored area of soil ecology and nutrient cycling, which are significant for forensic science, cemetery planning and livestock carcass disposal.

Autonomia e futuro da perícia oficial na percepção dos peritos criminais

Este estudo teve como objetivo levantar a visão de futuro da Criminalistiea brasileira conforme as pereepçõcs autonómieas de peritos oficiais empregando como parad igma os efeitos da Lei 12.03012009, que atribuiu a autonomia técnica, científica ti funcional " estes profissionais. Para isso, rea lizou-se uma pesquisa bibliográfica c de campo. O univcrso da pesquisa foi os Peritos Oficiai , . /\ amo,tra foi fommda por 39 peritos Criminais, um grupo principal COl1lpo~to por 31 peritos de carreira incluindo gestores locais de Instituições Federais (Polícia FctJeral, Polícia do Distrito Federal) e c.s tadoaiS (Polícia Civil e Secretaria de Scgurança Pública) c um grupo complcnlenlar composto por Gestores (04) c Lideranças (04) Nacionai~ destes órgãos. Ao grupo principal foi aplicado um testc de evocação com as palavras "Autonomia" e "Pcricia". como fase preparatória às entrevistas semi cSlrutura

O processo de construção da identidade do profissional Perito Criminal Federal

Segundo o Código de Processo Penal brasileiro, a Perícia é imprescindível, e não pode ser substituída pela confissão do acusado, nos crimes que deixem vestígios. Esta pesquisa inicia um estudo acerca da construção da identidade profissional do Perito Criminal Federal, o Perito que atua no âmbito da Polícia Federal no Brasil. A abordagem acadêmica foi adotada no sentido de serem identificadas as principais questões que contribuem na construção da identidade desse profissional. O objetivo principal do trabalho é o reconhecimento pelo Perito Criminal Federal do seu papel para a sociedade, de modo que se vislumbrem iniciativas que possam incentivar a busca de melhorias, de aprimoramento na formação e evolução dos profissionais, beneficiando não apenas a motivação e satisfação profissional, mas, sobretudo, a resposta que este produz para a sociedade. O resultado da pesquisa revelou que sua identidade, como a de qualquer profissional, está em constante metamorfose, e sofre a influência de sua história e verdades individuais e das influências do ambiente social e profissional. O estudo demonstrou que existem lacunas a serem preenchidas na visão do próprio profissional com relação ao retorno quanto ao resultado efetivo do seu trabalho, além da preocupação com o equilíbrio entre quantidade e qualidade na produção de Laudos Periciais Criminais. Observou-se ainda a existência de um ambiente organizacional desfavorável quanto ao cumprimento de leis e recomendações, internacionais e nacionais, que preconizam a necessidade de autonomia para a realização do trabalho pericial, de forma a garantir a prova isenta e neutra em busca da justiça. Também ficou nítida a necessidade de maior comunicação e discussão interna acerca da visão de futuro da profissão. É primordial para a efetivação de uma sociedade democrática, que respeita os direitos humanos e zela pela segurança pública, uma Perícia Criminal Federal consciente de sua identidade, efetiva, que possa atuar com motivação, celeridade e qualidade em prol da justiça para os cidadãos brasileiros.

A aplicabilidade do planejamento estratégico no âmbito da perícia criminal federal

A necessidade de lidar com a identificação, o desenvolvimento, a formalização e a implementação de estratégias na Criminalística da Polícia Federal leva a questionamentos quanto à presença das condições necessárias para a implantação efetiva de um processo de planejamento estratégico institucional no ambiente considerado, e cuja resposta constituiu o objetivo da presente pesquisa. Neste contexto, combinam-se elementos ligados à natureza de organização pública da Criminalística e conceitos da Administração advindos do ambiente da iniciativa privada, assim como idiossincrasias da categoria profissional formada pelos peritos criminais. E, por ser o planejamento estratégico uma atividade insólita na organização, está sujeito a uma série de riscos e ameaças sobre os quais ainda não se tem conhecimento suficiente. Este estudo valeu-se de entrevistas semiestruturadas para avaliar, a partir da percepção dos próprios peritos criminais federais, se estão presentes fatores relacionados a três perspectivas de destaque identificadas na literatura acadêmica que poderiam viabilizar a implantação do planejamento estratégico na Criminalística da Polícia Federal. A primeira perspectiva se refere ao contexto mais amplo de organização, extraída a partir de uma abordagem integradora sobre o processo de formação da estratégia, que considera a visão como elemento agregador entre a racionalidade do planejamento estratégico formalizado e a participatividade geradora das estratégias emergentes. A segunda diz respeito ao contexto mais restrito que abrange as organizações do setor público, em que as dimensões de propriedade comum, financiamento público e controle político resultam em uma série de especificidades em relação ao setor privado. Por fim, a terceira perspectiva trata da caracterização da Criminalística como organização profissional, em que a tensão entre controle gerencial e autonomia profissional assume importância de destaque. O resultado, obtido a partir de análise interpretativa fenomenológica das entrevistas, revelou que a falta de um senso comum sobre a direção a ser seguida pela organização, associada ao baixo envolvimento dos peritos, constitui um fator condicionante do sucesso do planejamento estratégico na Criminalística.

A interiorização da Perícia Criminal Federal

A presente pesquisa versa sobre a interiorização da Perícia Criminal da Polícia Federal, que consiste num projeto de implantação de Unidades Técnico-Científicas para a execução de exames periciais em algumas cidades do interior do Brasil onde existem delegacias da Polícia Federal. Após a abertura das primeiras unidades no interior do país surgiram alguns resultados positivos. Entretanto, também surgiram situações indesejáveis e aspectos negativos que não foram previstos. O objetivo do estudo foi avaliar as vantagens e as desvantagens da instalação de Unidades Técnico-Científicas no interior do país para a administração da Perícia Criminal Federal. A pesquisa foi realizada com 59 chefes das unidades de perícia criminal das capitais dos estados e das unidades do interior. O estudo demonstrou que alguns resultados positivos foram alcançados, como a maior rapidez no atendimento e a melhor interação com o usuário do serviço de perícia criminal. Mas foi constatado também que existem problemas relacionados à infraestrutura, recursos humanos e materiais nas unidades do interior. Com o estudo foi possível concluir que a continuidade do programa de interiorização da perícia criminal federal depende preliminarmente da realização dos investimentos necessários em recursos humanos e materiais para que as unidades atualmente existentes possam ter as condições adequadas para seu funcionamento.