Macrofaunal succession in sediments around kelp and wood falls in the deep NE Pacific and community overlap with other reducing habitats

Sunken parcels of macroalgae and wood provide important oases of organic enrichment at the deep-sea floor, yet sediment community structure and succession around these habitat islands are poorly evaluated. We experimentally implanted 100-kg kelp falls and 200 kg wood falls at 1670 m depth in the Santa Cruz Basin to investigate (1) macrofaunal succession and (2) species overlap with nearby whale-fall and cold-seep communities over time scales of 0.25-5.5 yr. The abundance of infaunal macrobenthos was highly elevated after 0.25 and 0.5 yr near kelp parcels with decreased macrofaunal diversity and evenness within 0.5 m of the falls. Apparently opportunistic species (e.g., two new species of cumaceans) and sulfide tolerant microbial grazers (dorvilleid polychaetes) abounded after 0.25-0.5 yr. At wood falls, opportunistic cumaceans become abundant after 0.5 yr, but sulfide tolerant species only became abundant after 1.8-5.5 yr, in accordance with the much slower buildup of porewater sulfides at wood parcels compared with kelp falls. Species diversity decreased significantly over time in sediments adjacent to the wood parcels, most likely due to stress resulting from intense organic loading of nearby sediments (up to 20-30% organic carbon). Dorvilleid and ampharetid polychaetes were among the top-ranked fauna at wood parcels after 3.0-5.5 yr. Sediments around kelp and wood parcels provided low-intensity reducing conditions that sustain a limited chemoautrotrophically-based fauna. As a result, macrobenthic species overlap among kelp, wood, and other chemosynthetic habitats in the deep NE Pacific are primarily restricted to apparently sulfide tolerant species such as dorvilleid polychaetes, opportunistic cumaceans, and juvenile stages of chemosymbiont containing vesicomyid bivalves. We conclude that organically enriched sediments around wood falls may provide important habitat islands for the persistence and evolution of species dependent on organic- and sulfide-rich conditions at the deep-sea floor and contribute to beta and gamma diversity in deep-sea ecosystems. (C) 2010 Elsevier Ltd. All rights reserved.

Microcollinearity between autopolyploid sugarcane and diploid sorghum genomes

Abstract Background Sugarcane (Saccharum spp.) has become an increasingly important crop for its leading role in biofuel production. The high sugar content species S. officinarum is an octoploid without known diploid or tetraploid progenitors. Commercial sugarcane cultivars are hybrids between S. officinarum and wild species S. spontaneum with ploidy at ~12×. The complex autopolyploid sugarcane genome has not been characterized at the DNA sequence level. Results The microsynteny between sugarcane and sorghum was assessed by comparing 454 pyrosequences of 20 sugarcane bacterial artificial chromosomes (BACs) with sorghum sequences. These 20 BACs were selected by hybridization of 1961 single copy sorghum overgo probes to the sugarcane BAC library with one sugarcane BAC corresponding to each of the 20 sorghum chromosome arms. The genic regions of the sugarcane BACs shared an average of 95.2% sequence identity with sorghum, and the sorghum genome was used as a template to order sequence contigs covering 78.2% of the 20 BAC sequences. About 53.1% of the sugarcane BAC sequences are aligned with sorghum sequence. The unaligned regions contain non-coding and repetitive sequences. Within the aligned sequences, 209 genes were annotated in sugarcane and 202 in sorghum. Seventeen genes appeared to be sugarcane-specific and all validated by sugarcane ESTs, while 12 appeared sorghum-specific but only one validated by sorghum ESTs. Twelve of the 17 sugarcane-specific genes have no match in the non-redundant protein database in GenBank, perhaps encoding proteins for sugarcane-specific processes. The sorghum orthologous regions appeared to have expanded relative to sugarcane, mostly by the increase of retrotransposons. Conclusions The sugarcane and sorghum genomes are mostly collinear in the genic regions, and the sorghum genome can be used as a template for assembling much of the genic DNA of the autopolyploid sugarcane genome. The comparable gene density between sugarcane BACs and corresponding sorghum sequences defied the notion that polyploidy species might have faster pace of gene loss due to the redundancy of multiple alleles at each locus.

Identificação determinística por subespaços

Neste artigo é apresentada uma visão geral sobre o problema de identificação por subespaços em malha aberta. Existem diversos algoritmos que solucionam este problema (MOESP, DSR, N4SID, CVA). Baseado nos métodos MOESP e N4SID os autores apresentam um algoritmo alternativo para identificar sistemas determinísticos operando em malha aberta. Dois processos simulados, um SISO e um MIMO são usados para mostrar o desempenho deste algoritmo.

Studio reologico avanzato di bitumi modificati ed additivati:proposta di una nuova procedura di aging

Le problematiche ambientali e socio – economiche legate alla costruzione di nuove infrastrutture viarie, impongono la progettazione e costruzione di strade che combinino ad elevati standard prestazionali, la riduzione dell’impatto ambientale in fase realizzativa e manutentiva. Quanto detto avvalora il crescente utilizzo di materiali bituminosi modificati con polimeri ed additivati con cere. I primi conferiscono alla miscela maggiore elastoplasticità, incrementandone la durabilità e la resistenza a fatica. Nei secondi la presenza del materiale paraffinico contribuisce a ridurre la viscosità del bitume, il che consente il notevole abbassamento della temperatura di produzione e stesa della miscela. Numerosi studi inoltre hanno dimostrato che le caratteristiche meccaniche della pavimentazione sono fortemente influenzate dal grado di ossidazione delle componenti organiche del bitume, ovvero dal fenomeno dell’invecchiamento o aging. Risulta pertanto fondamentale affiancare allo studio reologico del bitume, prove di simulazione dell’ invecchiamento nel breve e lungo termine. Nel corso della seguente ricerca si provvederà pertanto ad analizzare leganti modificati ed additivati secondo la teoria della viscoelasticità, simulando le reali condizioni di carico ed invecchiamento alle quali il bitume è sottoposto. Tutte le prove di caratterizzazione reologica avanzata prevederanno l’utilizzo del DSR (Dynamic Shear Rheometer) in varie configurazioni di prova e si simulerà l’invecchiamento a breve termine mediante RTFOT (Rolling thin film oven test). Si proporrà inoltre una nuova procedura di aging invecchiando il bitume alla temperatura di equiviscosità o Twork , ovvero a quel valore della temperatura tale per cui, in fase di messa in opera, si avrà una distribuzione molecolare omogenea del modificante all’interno del bitume. Verranno quindi effettuate ulteriori prove reologiche sui leganti invecchiati a tale temperatura. Si darà infine supporto ai risultati della ricerca effettuando prove chimiche con la tecnica analitica FTIR (Fourier Transform Infrared Spectroscopy), analizzando i cambiamenti molecolari avvenuti nel bitume a seguito dell’aggiunta del modificante e dell’invecchiamento.

Le reologia dei leganti bituminosi stradali: studio delle proprietà meccaniche a seguito di processi di “aging” in laboratorio

Lo studio effettuato pone le sue basi sulla ricerca di materiali stradali che combinino ad elevati standard prestazionali, la riduzione dell’impatto ambientale in fase realizzativa e manutentiva. In particolare il seguente lavoro si occupa dello studio di 7 leganti modificati con polimeri ed additivati con cere. I primi infatti conferiscono alla miscela maggiore elastoplasticità, incrementandone la durabilità e la resistenza a fatica. Nei secondi la presenza del materiale paraffinico contribuisce a ridurre la viscosità del bitume, consentendo un notevole abbassamento della temperatura di produzione e stesa della miscela. Numerosi studi hanno dimostrato che le caratteristiche meccaniche della pavimentazione sono fortemente influenzate dal grado di ossidazione delle componenti organiche del bitume, ovvero dal fenomeno dell’invecchiamento o aging. Pertanto allo studio reologico del bitume, si sono affiancate prove di simulazione dell’ invecchiamento nel breve e lungo termine. In fase di ricerca sperimentale si sono analizzati i leganti modificati ed additivati secondo la teoria della viscoelasticità, simulando le reali condizioni di carico ed invecchiamento alle quali il bitume è sottoposto. Tutte le prove di caratterizzazione reologica avanzata sono state effettuate mediante l’utilizzo del DSR (Dynamic Shear Rheometer - UNI EN 14770 ) in varie configurazioni di prova e l’invecchiamento a breve termine è stato simulato mediante RTFOT (Rolling thin film oven test -UNI EN 12607-1). Si è proposto inoltre una nuova procedura di aging invecchiando il bitume alla temperatura di Twork, ovvero a quel valore della temperatura tale per cui, in fase di messa in opera, si avrà una distribuzione molecolare omogenea del modificante all’interno del bitume.

Studio reologico di mastici bituminosi modificati con polverino di gomma da PFU

L’analisi della risposta delle pavimentazioni flessibili alle sollecitazioni veicolari ed alle variazioni di temperatura non può prescindere dallo studio del legante bituminoso: è all’interno del film di bitume, infatti, che avviene la rottura per fatica alle basse temperature (alte frequenze di carico) e che si sviluppano le deformazioni con conseguente fenomeno dell’ormaiamento alle alte temperature di esercizio (basse frequenze di carico). Il deterioramento di queste pavimentazioni, dovuto a fenomeni di fessurazione da fatica o di ormaiamento, infatti, è divenuto nel settore infrastrutturale oggetto di studio ed approfondimento. Spesso tali ammaloramenti sono accelerati dall’azione dell’acqua che, in assenza di strati impermeabili, raggiunge gli strati inferiori della sovrastruttura indebolendo le proprietà coesive del legante e di adesione tra bitume ed aggregati. Se a queste problematiche si aggiunge l’impatto ambientale di un’infrastruttura viaria (emissione di fumi durante la stesa del conglomerato), risulta evidente l’interesse nel campo della ricerca circa lo studio di leganti bituminosi modificati e additivati, in grado di aumentare le prestazioni del pacchetto stradale, oltre che a ridurne gli effetti negativi sull’ambiente. Per queste motivazioni, la presente Tesi si concentra sullo studio dei leganti e dei mastici bituminosi ottenuti con l’aggiunta di “Powdered Rubber Modifier (PRM)” ovvero di “Polverino di Gomma” ottenuto mediante il riciclaggio di pneumatici usati, attraverso opportune lavorazioni di natura meccanica. In campo stradale sta assumendo sempre più importanza l’utilizzo di pneumatici riciclati, in grado di aumentare le prestazioni del pacchetto stradale e di ridurne gli effetti negativi sull’ambiente. Per studiare e testare questi leganti e mastici bituminosi si è scelto di utilizzare un approccio tradizionale, consistente nella simulazione della risposta meccanica macroscopica mediante modelli costitutivi basati sulla teoria del mezzo continuo: ciò significa che la miscela viene sottoposta a prove di tipo statico e dinamico in un ampio intervallo di condizioni inerenti all’intensità della forza, alla velocità di applicazione del carico ed alla temperatura. In particolare, i materiali sopra citati sono stati testati mediante Dynamic Shear Rheometer (DSR-UNI EN 14770); tale apparecchiatura è in grado, attraverso l’applicazione di una sollecitazione dinamica con andamento sinusoidale, di simulare le reali condizioni di carico cui è sottoposta una pavimentazione stradale durante la sua vita utile. I risultati reologici ottenuti sono stati confrontati per valutare il contributo prestazionale di ciascun materiale componente le miscele.

Biene und Honig im pharaonischen Ägypten

Ziel der Dissertation war es, eine Gesamtbetrachtung der altägyptischen Bienenhaltung zu geben, die Bedeutung der Biene herauszuarbeiten und den Gebrauch des Honigs im alten Ägypten vorzustellen. Darüber hinaus wurde die Herkunft und Zusammensetzung des Honigs untersucht sowie ein Vergleich mit der Bienenhaltung in den Nachbarländern gezogen. rnrnDie Biene ist mehrfach als Symbol oder Dekorationselement vorzufinden. Bereits am Ende des Alten Reiches, einem Zeitpunkt, als sich die Domestikation der Bienen nachweisen läßt, treten Figurenzylinder, Stempelsiegel-Amulette und Amulettanhänger mit dem Bildnis der Biene auf. Auf diesen Zeugnissen repräsentierte sie Schutz, Fruchtbarkeit, Regeneration und Todesüberwindung. Diesen Eigenschaften lagen wahrscheinlich die Beobachtungen der verschiedenen Entwicklungsstadien der Honigbiene vom Ei über die mumienartige Larve bis zur Imago sowie ihre intensive Brutpflege zugrunde. rnrnÜber den Arbeitsablauf und die Organisation des Imkereibetriebes gaben vor allem die Topfaufschriften deutliche Hinweise. Für die Produktion des Honigs waren Imker verantwortlich, die sowohl im Staats- als auch im Tempeldienst stehen konnten. Sie waren in die Struktur der Warenschatzhäuser eingebunden. Meines Erachtens war die Imkerei stärker verbreitet als es die wenigen Quellen erahnen lassen. Denn allein für den Tempelkult wurden große Honigmengen benötigt. Neben den offiziellen Imkern des Königs und der Göttertempel muß es deshalb auch eine private Bienenhaltung gegeben haben. Wahrscheinlich betrieben mehrere Berufsgruppen aus dem Bereich der Landwirtschaft sowie Beamte und Schreiber, die über Land verfügten, eine eigene Honigproduktion. Dies ist aus den Angaben der Steuereinnahmen zu schließen, unter denen sich Produkte der Bienenwirtschaft befanden. rnrnDa aus dem pharaonischen Ägypten keine Berichte über den Ablauf der Bienenhaltung überliefert sind und archäologisch bislang keine Bienenstände in situ belegt sind, wurden vor allem die Beschreibungen griechischer und römischer Autoren sowie der Fund des Bienenhauses aus Tel Rehov in Israel als Vergleichsmaterial herangezogen.rnrnHonig war im pharaonischen Ägypten ein wertvoller Süßstoff, deshalb war die Biene auch in wirtschaftlicher Hinsicht wichtig und ihre ab der 5. Dynastie bildlich nachweisbare Domestikation führte zu höheren Honigerträgen. Honig war neben Fruchtsirup aus Datteln, Feigen oder Johannisbrotfrucht der einzige Süßstoff, da Zuckerrohr und Rübenzucker noch nicht bekannt waren. rnVerschiedene Honigsorten und -begriffe sind nachweißbar. Während bj.t allgemein den Honig bezeichnet, ist mit sn-bj.t Wabenhonig gemeint. Hinzu kommen verschiedene Adjektive, die die Honigsorte näher bestimmen. So wird roter (dSr.t), weißer (HD.t), flüssiger (stf), fester (gmgm), guter (nfr.t) und alter (is.t) unterschieden. rnAls Heilmittel findet Honig in zahlreichen medizinischen Rezepten Verwendung. In dieser Arbeit werden Augenkrankheiten und Fleischwunden näher behandelt. Eine große Rolle kam dem Honig im Götterkult zu. Die zahlreichen Opferstiftungen und Festkalender lassen auf eine üppige Verwendung sowohl im täglichen Tempelritual als auch bei Festen schließen. Durch das Opfern von Honig wollte der König seine Herrschaft über Ägypten sowie die Fruchtbarkeit des Landes sichern. rn

Characterization of moisture susceptibility of asphaltic bitumen

La ricerca riguarda lo studio delle modifiche indotte dalla diffusione di acqua e umidità nelle pavimentazioni stradali con riferimento ai materiali bituminosi. Lo scopo è stato quello di analizzare le implicazioni che si sviluppano a livello chimico e reologico in vari bitumi. In questo progetto oltre alla fase sperimentale, è stato utilizzato un software per la simulazione agli elementi finiti. Per quanto concerne la fase di laboratorio, è stato sviluppato un nuovo protocollo di condizionamento. Tre diversi bitumi sono stati soggetti alla diffusione di acqua in forma liquida o vapore, a determinate condizioni ambientali e per svariati intervalli temporali. Grazie a l’utilizzo di due camere climatiche il condizionamento è stato realizzato in modo uniforme a precisi valori temperatura e umidità mantenuti stabili. I materiali analizzati: un bitume soft, uno hard, ed infine uno modificato con l’aggiunta di polimeri. Il dispositivo FTIR-ATR è stato utilizzato per la caratterizzazione chimica, mentre il comportamento reologico è stato analizzato tramite test eseguiti con il DSR. Le avanzate tecnologie presenti nel laboratorio della TU Delft hanno consentito di ottenere notevoli risultati. L’analisi è stata condotta con l’obiettivo di evidenziare i diversi cambiamenti indotti dalla diffusione di acqua liquida o vapore e per analizzare l’influenza della temperatura, del tipo del bitume e dell’incremento del tempo di condizionamento. Una analisi analoga è stata condotta parallelamente, con lo scopo di investigare la correlazione tra il processo di invecchiamento e la diffusione di umidità. Infine, la simulazione agli elementi finiti è stata sviluppata tramite il software CAPA-3D per analizzare il comportamento del bitume in periodi più estesi di diffusione di umidità. Inoltre, il comportamento dei bitumi è stato studiato anche in presenza di particelle di riempitivo. Particelle granitiche e calcaree sono state aggiunte ai bitumi in differenti percentuali.

Multicenter phase II trial of gefitinib first-line therapy followed by chemotherapy in advanced non-small-cell lung cancer (NSCLC): SAKK protocol 19/03

BACKGROUND: Gefitinib is active in patients with pretreated non-small-cell lung cancer (NSCLC). We evaluated the activity and toxicity of gefitinib first-line treatment in advanced NSCLC followed by chemotherapy at disease progression. PATIENTS AND METHODS: In all, 63 patients with chemotherapy-naive stage IIIB/IV NSCLC received gefitinib 250 mg/day. At disease progression, gefitinib was replaced by cisplatin 80 mg/m(2) on day 1 and gemcitabine 1250 mg/m(2) on days 1, 8 for up to six 3-week cycles. Primary end point was the disease stabilization rate (DSR) after 12 weeks of gefitinib. RESULTS: After 12 weeks of gefitinib, the DSR was 24% and the response rate (RR) was 8%. Median time to progression (TtP) was 2.5 months and median overall survival (OS) 11.5 months. Never smokers (n = 9) had a DSR of 56% and a median OS of 20.2 months; patients with epidermal growth factor receptor (EGFR) mutation (n = 4) had a DSR of 75% and the median OS was not reached after the follow-up of 21.6 months. In all, 41 patients received chemotherapy with an overall RR of 34%, DSR of 71% and median TtP of 6.7 months. CONCLUSIONS: First-line gefitinib monotherapy led to a DSR of 24% at 12 weeks in an unselected patients population. Never smokers and patients with EGFR mutations tend to have a better outcome; hence, further trials in selected patients are warranted.

PERFORMANCE EVALUATION OF LLDPE/CaCO3 MODIFIERS WITH AND WITHOUT TITANATE COUPLING AGENT ON ASPHALT BINDER AND MIXTURE

The complexity and challenge created by asphalt material motivates researchers and engineers to investigate the behavior of this material to develop a better understanding, and improve the performance of asphalt pavement. Over decades, a wide range of modification at macro, meso, micro and nano scales have been conducted to improve the performance of asphalt pavement. This study was initiated to utilize the newly developed asphalt modifier pellets. These pellets consisted of different combinations of calcium carbonate (CaCO3), linear low-density polyethylene (LLDPE) and titanate coupling agent (CA) to improve the asphalt binder as well as pavement performance across a wide range of temperature and loading pace. These materials were used due to their unique characteristics and promising findings from various industries, especially as modifiers in pavement material. The challenge is to make sure the CaCO3 disperses very well in the mixture. The rheological properties of neat asphalt binder PG58-28 and modified asphalt binder (PG58-28/LLDPE, PG58-28/CaCO3, PG58-28/CaCO3/LLDPE, and PG58-28/CaCO3/LLDPE/CA), were determined using rotational viscometer (RV) test, dynamic shear rheometer (DSR) test and bending beam rheometer test. In the DSR test, the specimens were evaluated using frequency sweep and multiple shear creep recovery (MSCR). The asphalt mixtures (aggregate/PG58-28, aggregate/ PG58-28/LLDPE, aggregate/PG58-28/CaCO3, aggregate/PG58-28/LLDPE/CaCO3 and aggregate/PG58-28/LLDPE/CaCO3/CA) were evaluated using the four point beam fatigue test, the dynamic modulus (E*) test, and tensile strength test (to determines tensile strength ratio, TSR). The RV test results show that all modified asphalt binders have a higher viscosity compared to the neat asphalt binder (PG58-28). Based on the Jnr results (using MSCR test), all the modified asphalt binders have a better resistance to rutting compared to the neat asphalt binder. A higher modifier contents have resulted in a better recovery percentage of asphalt binder (higher resistance to rutting), except the specimens prepared using PECC’s modified asphalt binder (PG58-28/CaCO3/LLDPE). The BBR test results show that all the modified asphalt binders have shown comparable performance in term of resistance to low temperature cracking, except the specimen prepared using the LLDPE modifier. Overall, 5 wt% LLDPE modified asphalt binder was found to be the best asphalt binder in terms of resistance to rutting. Meanwhile, 3 wt% PECC-1CA’s modified asphalt binder can be considered as the best (in terms of resistance to thermal cracking) with the lowest mean critical cracking temperature. The appearance of CaCO3 was found useful merely in improving the resistance to fatigue cracking of asphalt mixture. However, application of LLDPE has undermined the fatigue life of asphalt mixtures. Adding LLDPE and coupling agent throughout this study does not sufficiently help in terms of elastic behavior which essential to enhance the resistance to fatigue cracking. In contrast, application of LLDPE has increased the indirect tensile strength values and TSR of asphalt mixtures, indicates a better resistance to moisture damage. The usage of the coupling agent does not change the behavior of the asphalt mixture, which could be due to imbalance effects resulted by combination of LLDPE and CaCO3 in asphalt binder. Further investigations without incorporating CaCO3 should be conducted further. To investigate the feasibility of using LLDPE and coupling agent as modifiers in asphalt pavements, more research should be conducted on different percentages of LLDPE (less than 3 wt%), and at the higher and w wider range of coupling agent content, from 3 wt% to 7 wt% based on the polymer mass.

Expectation Conditional Maximization-Based Deformable Shape Registration

This paper addresses the issue of matching statistical and non-rigid shapes, and introduces an Expectation Conditional Maximization-based deformable shape registration (ECM-DSR) algorithm. Similar to previous works, we cast the statistical and non-rigid shape registration problem into a missing data framework and handle the unknown correspondences with Gaussian Mixture Models (GMM). The registration problem is then solved by fitting the GMM centroids to the data. But unlike previous works where equal isotropic covariances are used, our new algorithm uses heteroscedastic covariances whose values are iteratively estimated from the data. A previously introduced virtual observation concept is adopted here to simplify the estimation of the registration parameters. Based on this concept, we derive closed-form solutions to estimate parameters for statistical or non-rigid shape registrations in each iteration. Our experiments conducted on synthesized and real data demonstrate that the ECM-DSR algorithm has various advantages over existing algorithms.

Variations of clinopyroxene/melt element partitioning during assimilation of olivine/peridotite by low-Mg diorite magma

The effects of crystal chemistry and melt composition on the control of clinopyroxene/melt element partitioning (D) during the assimilation of olivine/peridotite by felsic magma have been investigated in Mesozoic high-Mg diorites from North China. The assimilation resulted in significant increase of Mg, Cr and Ni and only slight (< 30%) decrease of incompatible elements of the magma, and the compositional variations have been mirrored by the normally and reversely zoned clinopyroxene microphenocrysts formed at the early stage of the magma evolution. The Mg# [100 × Mg / (Mg + Fe)] values of the reversely zoned clinopyroxenes increase from 65 to 75 in the core to 85–90 in the high-Mg midsection, and reduce back to 73–79 at the rim. Trace element profiles across all these clinopyroxene domains have been measured by LA-ICP-MS. The melt trace element composition has been constrained from bulk rock analyses of the fine-grained low- and high-Mg diorites. Clinopyroxene/melt partition coefficients for rare earth elements (REE) and Y in the high-Mg group zonings (Mg# > 73–79, DDy < 1.2) are positively correlated with tetrahedral IVAl and increase by a factor of 3–4 as tetrahedral IVAl increases from 0.01 to 0.1 per formula unit (pfu). These systematic variations are interpreted to be controlled by the clinopyroxene composition. In contrast, partition coefficients for low-Mg group zonings (Mg# < 75–79, DDy > 1.2) are elevated by up to an order of magnitude (for REE and Y) or more (for Zr and Hf) at similar IVAl, indicating dominant control of melt composition/structure. DZr and DHf show a larger sensitivity to the compositional change of crystal and melt than DREE. DTi values for the low- and high-Mg zonings show a uniform dependence on IVAl. DSr and DLi are insensitive to the compositional change of clinopyroxene and melt, resulting in Sr depletions in the clinopyroxene zonings with elevated REE without crystallization of plagioclase. Our observations show that crystal chemistry and melt composition/structure may alternatively control clinopyroxene/melt partitioning during the assimilation of peridotite by felsic magma, and may be useful for deciphering clinopyroxene compositions and related crust–mantle processes.

Evaluation of memory B cells among perinatally HIV infected children from Houston Texas

Background: HIV associated B cell exhaustion is a notable characteristic of HIV viremic adults. However, it is not known if such alterations are present in perinatal HIV infected children, whose viral dynamics differs from those seen in adults. In the present study we perform an analysis of B cells subsets and measure antigen-specific memory B cells (MBC) in a pediatric HIV infected cohort. ^ Methods: Peripheral mononuclear cells (PBMC) of perinatal HIV infected individuals are characterized into naïve (CD21hi/CD27−), classic (CD27+), tissue like (CD21lo/CD27 −) and activated MBC (CD27+CD21− ) by FACS. A memory ELISPOT assay is used to detect antibody secreting cells. We measure total IgG and antibodies specific for influenza, HBV, mumps, measles, rubella and VZV. Memory was expressed as spot forming cells (SPC) /million of PBMC. Wilcoxon rank-sum was used to compare unpaired groups and linear regression analysis was used to determine predictors of B cell dysfunction ^ Results: 41 HIV perinatal infected children are included (51.2% females and 65.9% Black). Age at study is median (range) 8.78 years (4.39-11.57). At the time of testing they have a CD4% of 30.9 (23.2-39.4), a viral load (VL) of 1.95 log10 copies/ml (1.68-3.29) and a cumulative VL of 3.4 log10 copy × days (2.7-4.0). Ninety two percent of the children are on cARV for > 6 months. Overall, HIV+ children compared with controls have a significant lower number of IgG and antigen specific SFC. In addition, they have a lower proportion of classical MBC 12.9 (8.09-19.85) vs 29.4 (18.7-39.05); 0.01, but a significant higher proportion of tissue like memory MBC 6.01 (2.79-12.7) vs 0.99 (0.87-1.38); 0.003, compared with controls. Patients are parsed on VL (<400 and ≥ 400 copies/ml) with the objective to evaluate the effect of VL on B cell status. Patients with a VL ≥ 400 copies/ml have a significantly lower IgG, HBV, measles, rubella and VZV SPC compared with those with a VL < 400 copies/ml. There are no significant differences in B cell subpopulations between the groups. A moderate negative correlation was observed between the time of cARV initiation and the frequency of IgG memory B cells, suggesting that early initiation of cARV appears to lead to a better functionality of the IgG memory B cells (P=0.05). A statistically significant positive correlation was observed between the total number of IgG memory cells and the number of antigen-specific memory B cells/SPCs. Suggesting that the progressive recovery of the IgG memory B cell pull goes along with a progressive increase in the number of antigen-specific SPCs. ^ Conclusion: A pediatric cohort in overall good status with respect to HIV infection and on ART has defects in B cell function and numbers (reduced total and antigen specific MBC and increased tissue like and reduced classical MBC).^