Bacterial functional redundancy along a soil reclamation gradient

A strategy to measure bacterial functional redundancy was developed and tested with soils collected along a soil reclamation gradient by determining the richness and diversity of bacterial groups capable of in situ growth on selected carbon substrates. Soil cores were collected from four sites along a transect from the Jamari tin mine site in the Jamari National Forest, Rondonia, RO, Brazil: denuded mine spoil, soil from below the canopy of invading pioneer trees, revegetated soil under new growth on the forest edge, and the forest floor of an adjacent preserved forest. Bacterial population responses were analyzed by amending these soil samples with individual carbon substrates in the presence of bromodeoxyuridine (BrdU), BrdU-labeled DNA was then subjected to a 16S-23S rRNA intergenic analysis to depict the actively growing bacteria from each site, the number and diversity of bacterial groups responding to four carbon substrates (L-serine, L-threonine, sodium citrate, and or-lactose hydrate) increased along the reclamation-vegetation gradient such that the preserved forest soil samples contained the highest functional redundancy for each substrate. These data suggest that bacterial functional redundancy increases in relation to the regrowth of plant communities and may therefore represent an important aspect of the restoration of soil biological functionality to reclaimed mine spoils. They also suggest that bacterial functional redundancy may be a useful indicator of soil quality and ecosystem functioning.

Macroinvertebrados aquáticos associados à Eichhornia azurea (Swartz) Kunth e suas relações com as variáveis abióticas em ecossistemas lênticos marginais (São Paulo, Brasil)

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Efeitos do fogo recorrente na serrapilheira: consequências para artrópodes, decomposição e mineralização de carbono e nitrogênio em uma floresta de transição da Amazônia

Os artrópodes possuem uma importante função no ecossistema, pois participam da ciclagem de nutrientes, decomposição, trituração e mistura da serrapilheira. Os incêndios florestais, cada vez mais freqüentes na Amazônia, destroem a camada de serrapilheira e os artrópodes que nela vivem. O objetivo desta tese é investigar como o fogo recorrente atua sobre este processo, investigando a abundância e densidade de artrópodes de serrapilheira e as taxas de decomposição da matéria orgânica e a mineralização de C e N em uma floresta de transição da Amazônia no município de Querência, estado do Mato Grosso. Para tanto, uma parcela de 50 ha de floresta primária (500 x 1000 m) foi queimada experimentalmente a cada ano a partir de 2004, e outra área de mesmo tamanho foi mantida intacta para controle. Os artrópodes foram coletados aleatoriamente em 40 pontos distribuídos dentro da parcela, por meio de armadilhas de solo (“pitfalls”) e em 40 pontos sendo extraídos da serrapilhaira através de funis de Berlese. As coletas foram realizadas em fevereiro, abril (estação chuvosa), junho e agosto (estação seca) de 2007, após a terceira queima experimental anual. Os artrópodes foram analisados até o nível taxonômico de ordem e as formigas foram identificadas até gênero. O estudo de decomposição foi feito com 480 bolsas se serrapilheira distribuídas aleatoriamente, com 240 em cada parcela, quatro meses após a última queimada. As bolsas foram confeccionadas com malhas de nylon com aberturas de 2 mm (malha fina), e em metade delas foram feitos três orifícios de 1 cm² de cada lado, permitindo a entrada de macroartrópodes (malha grossa). Em cada bolsa foi inserido cerca de 10 g de folhas secas. A cada dois meses 30 bolsas de cada tipo de malha foi retirada de cada parcela, totalizando duas retiradas na estação seca e duas na estação chuvosa. As bolsas foram secas em estufa e pesadas novamente. A diferença entre peso seco inicial e final representou a taxa de decomposição. A cada retirada de um lote de bolsas de cada tipo de malha e de cada parcela, uma subamostra (10) destas bolsas foram selecionadas aleatoriamente para análises de análise de C e N das folhas. Os artrópodes apresentaram fortes diferenças sazonais. Na estação seca os colêmbolas ocorreram em menor abundância e as formigas ocorreram em maior abundância. Concomitantemente aos efeitos de sazonalidade, os artrópodes apresentaram diversas respostas ao fogo, com alguns grupos apresentando aumento e outros redução em abundância e densidade em diferentes datas pós-fogo, em comparação a floresta controle. Os ortópteros se destacaram por terem apresentado maior abundância em todas as datas pós-fogo em comparação a floresta controle. Em geral os macropredadores freduziram sua abundância e densidade após o fogo (formigas, besouros, dentre outros) e os engenheiros de ecossistema e decompositores foram mais abundantes (baratas, ácaros, dentre outros) em relação à floresta controle. As formigas também apresentaram diferenças entre as parcelas: maior diversidade e modificações na composição de gêneros durante a estação seca, pois o fogo favoreceu o aumento em abundância de formigas generalistas. As taxas de decomposição na parcela queimada foram menores do que na parcela controle, e as bolsas de malha fina com menores taxas de decomposição do que as bolsas de malha grossa. As taxas de C e N também foram diferentes entre as parcelas, e a razão C/N, na parcela queimada se manteve estável em todas as datas pós-fogo, enquanto na parcela controle houve declínio gradual durante o experimento seguindo as estações. Estes resultados indicam que o fogo modifica a fauna de serrapilheira, reduzindo diversas populações de artrópodes e modificando a composição deste grupo. As bolsas de malha fina indicam que a exclusão de macroartrópodes reduzem a taxa de decomposição da matéria orgânica e que os microartrópodes são mais prejudicados. O fogo também reduz o processo de mineralização de C e N já que a razão C/N se manteve estável na parcela queimada. Este estudo demonstra que o fogo recorrente tem forte efeito sobre artrópodes de serrapilheira e ciclagem de nutrientes em florestas de transição da Amazônia.

Partitioning the net effect of host diversity on an emerging amphibian pathogen

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Diverse urban plantings managed with sufficient resource availability can increase plant productivity and arthropod diversity

Buildings structures and surfaces are explicitly being used to grow plants, and these "urban plantings" are generally designed for aesthetic value. Urban plantings also have the potential to contribute significant "ecological values" by increasing urban habitat for animals such as arthropods and by increasing plant productivity. In this study, we evaluated how the provision of these additional ecological values is affected by plant species richness; the availability of essential resources for plants, such as water, light, space; and soil characteristics. We sampled 33 plantings located on the exterior of three buildings in the urban center of Brisbane, Australia (subtropical climatic region) over 2, 6 week sampling periods characterized by different temperature and rainfall conditions. Plant cover was estimated as a surrogate for productivity as destructive sampling of biomass was not possible. We measured weekly light levels (photosynthetically active radiation), plant CO2 assimilation, soil CO2 efflux, and arthropod diversity. Differences in plant cover were best explained by a three-way interaction of plant species richness, management water regime and sampling period. As the richness of plant species increased in a planter, productivity and total arthropod richness also increased significantly likely due to greater habitat heterogeneity and quality. Overall we found urban plantings can provide additional ecological values if essential resources are maintained within a planter such as water, light and soil temperature. Diverse urban plantings that are managed with these principles in mind can contribute to the attraction of diverse arthropod communities, and lead to increased plant productivity within a dense urban context.

Pagamento por serviços ambientais: estudo de caso: simulação da aplicação do programa do “Produtor de Água” na bacia do Rio Pirajibu

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Fauna edáfica na dinâmica sucessional da Mata Atlântica em floresta estacional semidecidual na Bacia do Rio Paraíba do Sul - RJ

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Seedling fate across different habitats: the effects of herbivory and soil fertility

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Floral nectar production and nectary structure of a bee-pollinated shrub from Neotropical savanna

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Avifauna em matas ciliares: caracterização visando ações de emergência, mitigação e compensação em caso de derramamento de combustíveis em vias hidroviárias

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Avifauna em matas ciliares: caracterização visando ações de emergência, mitigação e compensação em caso de derramamento de combustíveis em vias hidroviárias

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Comparing properties of natural biogenic with biomass burning particles in Amazonia.

The Large Scale Biosphere Atmosphere Experiment in Amazonia (LBA) is a long-term (20 years) research effort aimed at the understanding of the functioning of the Amazonian ecosystem. The strong biosphere-atmosphere interaction is a key component of the ecosystem functioning. Two aerosol components are the most visible: The natural biogenic emissions of particles and VOCs, and the biomass burning emissions. Two aerosol and trace gases monitoring stations were operated for 4 years in Manaus and Porto Velho, two very distinct sites, with different land use change. Manaus is a very clean and pristine site and Porto Velho is representative of heavy land use change in Amazonia. Aerosol composition, optical properties, size distribution, vertical profiling and optical depth were measured from 2008 to 2012. Aerosol radiative forcing was calculated over large areas. It was observed that the natural biogenic aerosol has significant absorption properties. Organic aerosol dominates the aerosol mass with 80 to 95%. Light scattering and light absorption shows an increase by factor of 10 from Manaus to Porto Velho. Very few new particle formation events were observed. Strong links between aerosols and VOC emissions were observed. Aerosol radiative forcing in Rondonia shows a high -15 watts/m² during the dry season of 2010, showing the large impacts of aerosol loading in the Amazonian ecosystem. The increase in diffuse radiation changes the forest carbon uptake by 20 to 35%, a large increase in this important ecosystem.

Response of nutrient cycles of an old-growth montane forest in Ecuador to experimental low-level nutrient amendments

Atmospheric nitrogen (N) and phosphorus (P) depositions are expected to increase in the tropicsrnas a consequence of increasing human activities in the next decades. Furthermore, a possiblernshortened El Niño Southern Oscillation cycle might come along with more frequent calcium (Ca)rndepositions on the eastern slope of the Ecuadorian Andes originating from Saharan dust. It isrncrucial to understand the response of the old-growth montane forest in Ecuador to increasedrnnutrient deposition to predict the further development of this megadiverse ecosystem.rnI studied experimental additions of N, P, N+P and Ca to the forest and an untreatedrncontrol, all in a fourfold replicated randomized block design. These experiments were conductedrnin the framework of a collaborative research effort, the NUtrient Manipulation EXperimentrn(NUMEX). I collected litter leachate, mineral soil solution (0.15 and 0.30 m depths), throughfallrnand fine litterfall samples and determined N, P and Ca concentrations and fluxes. This approachrnalso allowed me to assess whether N, P and/or Ca are limiting nutrients for forest growth.rnFurthermore, I evaluated the response of fine root biomass, leaf area index, leaf area and specificrnleaf area, tree diameter growth and basal area increment contributed from a cooperating group inrnthe Ca applied and control treatments.rnDuring the observation period of 16 months after the first fertilizer application, less thanrn10, 1 and 5% of the applied N, P and Ca, respectively, leached below the organic layer whichrncontained almost all roots but no significant leaching losses occurred to the deeper mineral soil.rnDeposited N, P and Ca from the atmosphere in dry and wet form were, on balance, retained in therncanopy in the control treatment. Retention of N, P and Ca in the canopy in their respectiverntreatments was reduced resulting in higher concentrations and fluxes of N, P and Ca inrnthroughfall and litterfall. Up to 2.5% of the applied N and 2% of the applied P and Ca werernrecycled to the soil with throughfall. Fluxes of N, P and Ca in throughfall+litterfall were higher inrnthe fertilized treatments than in the control; up to 20, 5 and 25% of the applied N, P and Ca,rnrespectively, were recycled to the soil with throughfall+litterfall.rnIn the Ca-applied plots, fine root biomass decreased significantly. Also the leaf area of thernfour most common tree species tended to decrease and the specific leaf area increasedrnsignificantly in Graffenrieda emarginata Triana, the most common tree species in the study area.rnThese changes are known plant responses to reduced nutrient stress. Reduced aluminium (Al)rntoxicity as an explanation of the Ca effect was unlikely, because of almost complete organocomplexationrnof Al and molar Ca:Al concentration ratios in solution above the toxicity threshold.rnThe results suggest that N, P and Ca co-limit the forest ecosystem functioning in thernnorthern Andean montane forests in line with recent assumptions in which different ecosystemrncompartments and even different phenological stages may show different nutrient limitationsrn(Kaspari et al. 2008). I conclude that (1) the expected elevated N and P deposition will bernretained in the ecosystem, at least in the short term and hence, quality of river water will not bernendangered and (2) increased Ca input will reduce nutrient stress of the forest.

Soil indicators to assess the effectiveness of restoration strategies in dryland ecosystems

Soil indicators may be used for assessing both land suitability for restoration and the effectiveness of restoration strategies in restoring ecosystem functioning and services. In this review paper, several soil indicators, which can be used to assess the effectiveness of ecological restoration strategies in dryland ecosystems at different spatial and temporal scales, are discussed. The selected indicators represent the different viewpoints of pedology, ecology, hydrology, and land management. Two overall outcomes stem from the review. (i) The success of restoration projects relies on a proper understanding of their ecology, namely the relationships between soil, plants, hydrology, climate, and land management at different scales, which are particularly complex due to the heterogeneous pattern of ecosystems functioning in drylands. (ii) The selection of the most suitable soil indicators follows a clear identification of the different and sometimes competing ecosystem services that the project is aimed at restoring.

Temporal and small-scale spatial variation in grassland productivity, biomass quality, and nutrient limitation

Characterization of spatial and temporal variation in grassland productivity and nutrition is crucial for a comprehensive understanding of ecosystem function. Although within-site heterogeneity in soil and plant properties has been shown to be relevant for plant community stability, spatiotemporal variability in these factors is still understudied in temperate grasslands. Our study aimed to detect if soil characteristics and plant diversity could explain observed small-scale spatial and temporal variability in grassland productivity, biomass nutrient concentrations, and nutrient limitation. Therefore, we sampled 360 plots of 20 cm × 20 cm each at six consecutive dates in an unfertilized grassland in Southern Germany. Nutrient limitation was estimated using nutrient ratios in plant biomass. Absolute values of, and spatial variability in, productivity, biomass nutrient concentrations, and nutrient limitation were strongly associated with sampling date. In April, spatial heterogeneity was high and most plots showed phosphorous deficiency, while later in the season nitrogen was the major limiting nutrient. Additionally, a small significant positive association between plant diversity and biomass phosphorus concentrations was observed, but should be tested in more detail. We discuss how low biological activity e.g., of soil microbial organisms might have influenced observed heterogeneity of plant nutrition in early spring in combination with reduced active acquisition of soil resources by plants. These early-season conditions are particularly relevant for future studies as they differ substantially from more thoroughly studied later season conditions. Our study underlines the importance of considering small spatial scales and temporal variability to better elucidate mechanisms of ecosystem functioning and plant community assembly.