Molecular dating of caprines using ancient DNA sequences of Myotragus balearicus, an extinct endemic Balearic mammal

Background: Myotragus balearicus was an endemic bovid from the Balearic Islands (Western Mediterranean) that became extinct around 6,000-4,000 years ago. The Myotragus evolutionary lineage became isolated in the islands most probably at the end of the Messinian crisis, when the desiccation of the Mediterranean ended, in a geological date established at 5.35 Mya. Thus, the sequences of Myotragus could be very valuable for calibrating the mammalian mitochondrial DNA clock and, in particular, the tree of the Caprinae subfamily, to which Myotragus belongs. Results: We have retrieved the complete mitochondrial cytochrome b gene (1,143 base pairs), plus fragments of the mitochondrial 12S gene and the nuclear 28S rDNA multi-copy gene from a well preserved Myotragus subfossil bone. The best resolved phylogenetic trees, obtained with the cytochrome b gene, placed Myotragus in a position basal to the Ovis group. Using the calibration provided by the isolation of Balearic Islands, we calculated that the initial radiation of caprines can be dated at 6.2 ± 0.4 Mya. In addition, alpine and southern chamois, considered until recently the same species, split around 1.6 ± 0.3 Mya, indicating that the two chamois species have been separated much longer than previously thought. Conclusion: Since there are almost no extant endemic mammals in Mediterranean islands, the sequence of the extinct Balearic endemic Myotragus has been crucial for allowing us to use the Messinian crisis calibration point for dating the caprines phylogenetic tree.

Good outcomes of Lyme arthritis in 24 patients in an endemic area of Switzerland

RESUME : But : Décrire l'évolution après traitement de l'arthrite de Lyme dans une zone d'endémie de l'Ouest de la Suisse, région où certains parmi les premiers cas d'arthrite de Lyme en dehors des Etats-Unis (USA) ont été rapportés. Patients et méthodes : Une évaluation rétrospective a été faite à partir d'un groupe de 24 patients (15 H, 9 F; âge moyen :38,7 ans) qui ont présenté une arthrite monoarticulaire (20 cas) ou oligoarticulaire (4 cas) causée par une infection à Borrelia burgdorferi (Bb). Ces patients ont été recrutés par l'intermédiaire de rhumatologues entre 1994 et 1999. Le genou était touché dans 85 % des cas. Une histoire de piqûre de tique était décrite dans 9 cas et un érythème chronique migrant dans 4 cas. Tous les patients avaient un titre d'anticorps pour Bb élevé, dosé par ELISA.Dans 20 cas, un immunoblot était positif pour Bb, la majorité étant positif pour les 3 sous-types de Bb présents en Suisse ; un seul cas était positif pour Bb sensu stricto. Neuf liquides synoviaux ont été examinés par PCR afin de détecter la présence de BbDNA (6 cas positifs). Résultats : Tous les patients ont reçu des antibiotiques soit oralement (10 cas), soit par voie parentérale (14 cas). Une deuxième cure d'antibiotiques a été administrée à 4 patients en raison de persistance de l'arthrite. On a observé une évolution rapidement favorable chez 13 patients et dans 9 cas, il a fallu, pour obtenir la guérison, réaliser une injection intraarticulaire de glucocorticoïdes ou une synoviorthèse. Après une période d'observation de 40 mois en moyenne (de 6 à 84 mois), aucun patient n'a présenté de signe d'arthrite chronique, mais 2 patients se plaignaient encore de myalgies ou d'arthralgies. Conclusion : Nous n'avons pas trouvé dans notre étude d'arthrite récidivante ou chronique après traitement comme on l'a décrit aux USA. Ceci est peut-être lié au fait que les types de Bb observés en Europe sont différents des USA où on trouve seulement Bb sensu stricto. ABSTRACT: Objective: To describe outcomes of treated Lyme arthritis in an endemic area of western Switzerland, where some of the first cases of Lyme disease outside the United States were reported. Patients and methods: We retrospectively studied 24 patients (15 males and nine females, mean age 38.7 years) managed by rheumatologists between 1994 and 1999 for Borrelia burgdotferi arthritis manifesting as monoarthritis (a = 20), oligoarthritis (a = 3), or polyarthritis (a = 1). The knee was affected in 20 (85%) patients. Nine patients reported a history of tick bite and four of erythema chronicum migrans. All the patients but one had a high titer of antibodies to B. burgdoiferi by ELISA and all but two had a positive immunoblot test (22 positive for all three types of B. burgdorferi found in Switzerland and one positive only for B. burgdoiferi sensu stricto). Joint fluid PCR for B. burgdorferi was done in nine patients and was positive in six. Results: All 24 patients received antibiotic therapy, orally (a= 10) or parenterally (n= 14). A second course of antibiotic therapy was used in four patients with persistent arthritis. A rapid response was noted in 13 patients. IntraarticUlar glucocorticoid therapy or a synoviorthesis was required in nine patients. After a mean follow-up of 40 months (range, 6-84 months), none of the patients had chronic arthritis but two reported persistent muscle or joint pain. Conclusion: Recurrent or chronic arthritis, which has been reported in treated patients in the United States, did not occur in our series. This may be ascribable to differences in B. burgdolferi subtypes, as in the United States only B. burgdoiferi sensu stricto is found.

Secretory IgA: an actor of the interplay between the commensal flora and the intestinal immune system?

In the gastro-intestinal tract,Peyers patches have been describedas a major inductive site for mucosalsecretory IgA (SIgA) responses directedagainst pathogens. The classicalview is that SIgAserves as the firstline of defense against microorganismsby agglutining potential invadersand faciliting their clearance byperistaltic and mucociliary movements,a mechanism called immuneexclusion. Our laboratory has shownthat SIgA is not only able to be"retrotransported" into Peyers patchesvia the associated M cells, but also todeliver sizeable cargos in the form ofSIgA-based immune complexes, resultingin the onset of non-inflammatorytype of responses. Such a novelfunction raises the question of thepossible role of mucosal SIgA in theinterplay with commensal bacteriaand the contribution of the antibody inbacterial homeostasis. To address thisquestion, Lactobacillus rhamnosus(LPR) was administered into a mouseligated loop comprising a Peyerspatch, in association or not with SIgA.The fate of fluorescently labelled bacteriawas followed by laser scanningconfocal microscopy at different incubationtimes. After 2 hours of incubationin the loop, LPR bacteria arefound more abundantly in thesubepithelial dome (SED) regionwhen they are coated with SIgA thanLPR administered alone despite theyare absent from neighboring villi.Herein, it is shown that this mechanismof entry involves M cells inPeyers pathes. After their sampling byM cells, bacteria are engulfed by thedendritic cells of the subjacent SEDregion. Interestingly, LPR bacteriaare found coated by the endogenousnatural SIgA present in mice intestinalsecretions, confirming the requirementof SIgA for this type of entry.The subsequent effect on the maturationof dendritic cells after interactionwith LPR was investigated in vitroin presence or not of SIgA by measuringthe expression of CD40, CD80and CD86 surface markers with flowcytometry analyses. Results show thatDCs respond in the same way in presenceof SIgA than with LPR bacteriaalone, indicating that SIgA does notmodulate the interaction betweenDCs and bacteria in this context. Thiswork gives new evidences about theinvolvement of SIgA in the mechanismby which the intestinal immunesystem permanently checks the contentof the intestine.

Le tour de France : état actuel de la classe ouvrière sous l'aspect moral, intellectuel, matériel / Flora Tristan... ; notes de Jules L. Puech

Collection : Archives et documents

Laboratory diagnosis of brucellosis in a rural endemic area in northeastern Spain

Sera obtained from 62 patients from four mountain counties in Catalonia (Northeastern Spain), in whom brucellosis had been diagnosed on the basis of clinical evidence and/or personal history, were analyzed using the rose Bengal test, standard serum agglutination test (SAT), Coombs" test, ELISA, and complement fixation. The diagnosis was further confirmed through blood cultures. Clinical evidence, epidemiology, and the results from serologic tests were used to assign patients to one of two groups: group 1 (n = 38) patients had primary infections, whereas group 2 (n = 24) patients had been previously exposed to the microorganism, i.e. re-infection of group 2 individuals occurred after long periods of time during which no active infection by Brucella had been detected. Receivingoperating charts (ROC) were used to determine the diagnostic value of the different tests and to establish discriminant values. Blood culture was a valuable diagnostic tool in group 1 (0.92 sensitivity) but was inappropriate in group 2 (0.08). The combination of positive rose Bengal test and agglutination ≥1/160 was valid for diagnosis in group 1. In group 2, agglutination < 1/160 (including negative agglutination) did not rule out brucellosis. The combination of positive rose Bengal test and Coombs" test ≥1/320 was the best diagnostic criterion (0.8 specificity; 1 sensitivity). ELISA (for IgG, IgM, or both) did not improve diagnostic accuracy

Avaluació de la flora i vegetació del bosc de ribera dins l'àmbit del projecte "Riberes del Ter"

L’any 2009, els ajuntaments de Manlleu, Les Masies de Voltregà i Torelló, sota la coordinació del Centre d’Estudis dels Rius Mediterranis (CERM, en endavant), varen engegar un projecte anomenat “Riberes del Ter”. Aquest projecte consisteix en la restauració ecològica del bosc de ribera al curs migalt del riu Ter, partint d’acords de custòdia amb els titulars de les finques (públics o privats). L’objectiu dels acords és ordenar els usos que afecten el bosc de ribera per millorar-ne l’estat ecològic i garantir-ne la conservació. Els instruments per aconseguir-ho són les tècniques silvícoles combinades amb la regulació dels usos ramaders, lúdics i de gestió de la biodiversitat (CAMPRODON et al., 2010). Tanmateix, l’avaluació de l’estat de conservació d’espais naturals és part fonamental, tant per la realització d’estudis del medi com també per poder planificar i desenvolupar projectes de restauració. La valoració de la qualitat o naturalitat d’un espai permet realitzar futures comparacions i conèixer d’una forma objectiva l’eficàcia de mesures correctores i treballs de restauració. En aquest sentit, el projecte “Riberes del Ter” es complementa també amb el projecte “RICOVER” (programa Interreg SUDOE 2009-2011) que, de forma prèvia i posterior a les actuacions, permet efectuar un pla de seguiment de variables hidromorfològiques i biològiques (CAMPRODON et al., 2010; ORDEIX et al., 2010). El present treball s’emmarca doncs, dins d’aquest dos projectes, com un primer estudi de vegetació riberenca al llarg del tram de riu afectat pels treballs de restauració, per poder avaluar en la posteritat els resultats de les actuacions de millora de l’entorn del riu.

Contribució al coneixement de la flora catalana occidental, III

En aquest treball s'aporten dades sobre la presència de nous tàxons a la plana occidental catalana, i que impliquen, en la majoria dels casos, ampliar de manera notable l'àrea de distribució de l'espècie. Són de destacar Cheirolophus intybaceus (Lam.) Dostál, Iris spuria L., Lathyrus annuus L., Phagnalon rupestre (L.) DC., Succisa pratensis Moench, Trigonella gladiata Steven ex Bieb. i Orchis laxiflora Lam. subsp. palustris (Jacq.) Bonnier & Layens.

Aportaciones a la Flora del Sudeste Iberico, II.

Aportaciones a la Flora del Sudeste Ibérico, II.

Aportacion al conocimiento de la flora liquenica silicicola de la parte culminal de Sierra Nevada

Aportación al conocimiento de la flora liquénica silicícola de la parte culminal de Sierra Nevada comprendida entre los Peñones de San Francisco (2.500 m) y el Mulhacén (3.482 m). Se da cuenta de 104 especies, en su mayoría nuevas citas para Sierra Nevada, entre las cuales, son táxones nuevos para España los que se citan en el resumen en inglés.

De Flora Dianicae

Breve aportación al catálogo provincial de RIGUAL (Flora y Vegetación de la provincia de Alicante, Inst. Est. Alicantinos, 1972), a la par que se recuerda la estancia de ROUY en este enclave (Excursions botaniques en Espagne. Bull. Soc. Bot. France 31:33-41, 52-56. 1884). En el trabajo de Rouy, que no menciona el señor Rigual, se recogen no pocas novedades, algunas de indudable interés para la flora alicantina. De las mismas, aquí nos limitaremos a transcribir las que hemos podido testificar en el campo. Señalamos con un asterisco (*) las novedades al mencionado catálogo. Coordenadas UTM en cuadrículas de 10 Km de lado. Designación de uso y zona para todas las localidades: 31S. Testimonios: herbario de la Facultad de Farmacia de Barcelona (BCF).

Consideraciones generales sobre la flora del valle de Ribes

Coup d'oeil sur la flore de la vallée de Ribes (Pyrénées catalanes). On fait des commentaires critiques des principales publications apportant des données floristiques sur la contrée: le «Catàlech de la Flora de la Valí de Nuria», d'E. VAYREDA I VILA , la «Flora de la Valí de Nuria i els seus encontorns», de Frère SfeiMNEN, la «Flora de Catalunya», de J. CADEVALL I DARS et la «Végétation alpine des Pyrénées orientales», de J. BRAUNBLANQUET. On donne una liste partielle des espèces l'existence desquelles dans la région malgré y avoir été indiqués par divers auteurs parait inadmissible ou, au moins, fort douteuse. On indique la répartition dans la contrée de quelques plantes appartenant à des éléments phytogéographiques différents et on divise la contrée en des petits territoires, caractérisé chacun d'eux par de divers groupes d'espèces.

Notes sobre la flora de la Terra Baixa Catalana.

Durant les nostres excursions hem aplegat una bona quantitat de dades sobre la flora catalana. D'aquestes dades hem seleccionat les que creiem que son mes intéressants tant per la seva novetat com per la seva raresa. Llevat de molt poques excepcions ara només aportem citacions de plantes de la terra baixa i, en especial, de les serralades costeres catalanes. Ultra la indicació de les dades de localització de cada pianta (comarca, municipi, indret concret i altitud) i d'alguna indicació de l'habitat o l'ecologia, hi afegim la notació del quadrat U.T.M. de 10 km de costat. Remarquem que en alguns casos, quan ens ha estât possible, hi afegim, entre claudàtors, la xifra del quadrat d'U.T.M. d'un quilòmetre de costat. A la llista que segueix, les espècies són disposades per ordre alfabètic.

Biological Flora of the British Isles: Ambrosia artemisiifolia

1. This account presents information on all aspects of the biology of Ambrosia artemisiifolia L. (Common ragweed) that are relevant to understanding its ecology. The main topics are presented within the standard framework of the Biological Flora of the British Isles: distribution, habitat, communities, responses to biotic factors, responses to environment, structure and physiology, phenology, floral and seed characters, herbivores and disease, history, and conservation, impacts and management. 2. Ambrosia artemisiifolia is a monoecious, wind-pollinated, annual herb native to North America whose height varies from 10 cm to 2.5 m according to environmental conditions. It has erect, branched stems and pinnately lobed leaves. Spike-like racemes of male capitula composed of staminate (male) florets terminate the stems, while cyme-like clusters of pistillate (female) florets are arranged in groups the axils of main and lateral stem leaves. 3. Seeds require prolonged chilling to break dormancy. Following seedling emergence in spring, the rate of vegetative growth depends on temperature, but development occurs over a wide thermal range. In temperate European climates, male and female flowers are produced from summer to early autumn (July to October). 4. Ambrosia artemisiifolia is sensitive to freezing. Late spring frosts kill seedlings and the first autumn frosts terminate the growing season. It has a preference for dry soils of intermediate to rich nutrient level. 5. Ambrosia artemisiifolia was introduced into Europe with seed imports from North America in the 19th century. Since World War II, it has become widespread in temperate regions of Europe and is now abundant in open, disturbed habitats as a ruderal and agricultural weed. 6. Recently, the N. American ragweed leaf beetle (Ophraella communa) has been detected in southern Switzerland and northern Italy. This species appears to have the capacity to substantially reduce growth and seed production of A. artemisiifolia. 7. In heavily infested regions of Europe, A. artemisiifolia causes substantial crop-yield losses and its copious, highly allergenic pollen creates considerable public health problems. There is consensus among models that climate change will allow its northward and up-hill spread in Europe.

Mixomicetes nuevos o interesantes para la flora iberica y Balear. III

Señalamos la presencia de Calomyxa metallica, Clastoderma debaryanum y Dianema harveyi en diferentes localidades peninsulares. De dichas especies, no indicadas hasta el momento para la flora española, comentamos la corologia, ecologia y caracteres diferenciales.