Advances in targeted therapies for hepatocellular carcinoma in the genomic era

Mortality owing to liver cancer has increased in the past 20 years, and the latest estimates indicate that the global health burden of this disease will continue to grow. Most patients with hepatocellular carcinoma (HCC) are still diagnosed at intermediate or advanced disease stages, where curative approaches are often not feasible. Among the treatment options available, the molecular targeted agent sorafenib is able to significantly increase overall survival in these patients. Thereafter, up to seven large, randomized phase III clinical trials investigating other molecular therapies in the first-line and second-line settings have failed to improve on the results observed with this agent. Potential reasons for this include intertumour heterogeneity, issues with trial design and a lack of predictive biomarkers of response. During the past 5 years, substantial advances in our knowledge of the human genome have provided a comprehensive picture of commonly mutated genes in patients with HCC. This knowledge has not yet influenced clinical decision-making or current clinical practice guidelines. In this Review the authors summarize the molecular concepts of progression, discuss the potential reasons for clinical trial failure and propose new concepts of drug development, which might lead to clinical implementation of emerging targeted agents.

Post-Procedural Troponin Elevation and Clinical Outcomes Following Transcatheter Aortic Valve Implantation.

BACKGROUND Biomarkers of myocardial injury increase frequently during transcatheter aortic valve implantation (TAVI). The impact of postprocedural cardiac troponin (cTn) elevation on short-term outcomes remains controversial, and the association with long-term prognosis is unknown. METHODS AND RESULTS We evaluated 577 consecutive patients with severe aortic stenosis treated with TAVI between 2007 and 2012. Myocardial injury, defined according to the Valve Academic Research Consortium (VARC)-2 as post-TAVI cardiac troponin T (cTnT) >15× the upper limit of normal, occurred in 338 patients (58.1%). In multivariate analyses, myocardial injury was associated with higher risk of all-cause mortality at 30 days (adjusted hazard ratio [HR], 8.77; 95% CI, 2.07-37.12; P=0.003) and remained a significant predictor at 2 years (adjusted HR, 1.98; 95% CI, 1.36-2.88; P<0.001). Higher cTnT cutoffs did not add incremental predictive value compared with the VARC-2-defined cutoff. Whereas myocardial injury occurred more frequently in patients with versus without coronary artery disease (CAD), the relative impact of cTnT elevation on 2-year mortality did not differ between patients without CAD (adjusted HR, 2.59; 95% CI, 1.27-5.26; P=0.009) and those with CAD (adjusted HR, 1.71; 95% CI, 1.10-2.65; P=0.018; P for interaction=0.24). Mortality rates at 2 years were lowest in patients without CAD and no myocardial injury (11.6%) and highest in patients with complex CAD (SYNTAX score >22) and myocardial injury (41.1%). CONCLUSIONS VARC-2-defined cTnT elevation emerged as a strong, independent predictor of 30-day mortality and remained a modest, but significant, predictor throughout 2 years post-TAVI. The prognostic value of cTnT elevation was modified by the presence and complexity of underlying CAD with highest mortality risk observed in patients combining SYNTAX score >22 and evidence of myocardial injury.

Dietary intake patterns and relationships to polybrominated diphenyl ether (PBDE) and phthalate body burden

Polybrominated diphenyl ethers (PBDEs) and phthalates are chemicals of concern because of high levels measured in people and the environment as well as the demonstrated toxicity in animal studies and limited epidemiological studies. Exposure to these chemicals has been associated with a range of toxicological outcomes, including developmental effects, behavioral changes, endocrine disruption, effects on sexual health, and cancer. Previous research has shown that both of these classes of chemicals contaminate food in the United States and worldwide. However, how large a role diet plays in exposure to these chemicals is currently unknown. To address this question, an exploratory analysis of data collected as part of the 2003-04 National Health and Nutrition Examination Survey (NHANES) was conducted. Associations between dietary intake (assessed by 24-hour dietary recalls) for a range of food types (meat, poultry, fish, and dairy) and levels PBDEs and phthalate metabolites were analyzed using multiple linear regression modeling. Levels of individual PBDE congeners 28, 47, 99, 100 as well as total PBDEs were found to be significantly associated with the consumption of poultry. Metabolites of di-(2-ethylhexyl) phthalate (DEHP) were found to be associated with the consumption of poultry, as well as with an increased consumption of fat of animal origin. These results, combined with results from previous studies, suggest that diet is an important route of intake for both PBDEs and phthalates. Further research needs to be conducted to determine the sources of food contamination with these toxic chemicals as well as to describe the levels of contamination of US food in a large, representative sample.^

Hydrogeological investigations in the upper Ouémé catchment in Benin, West Africa

The scope of this PhD thesis was the hydrogeological conceptualisation of the Upper Ouémé river catchment in Benin. The study area exceeds 14,500 km**2 and is underlain by a crystalline basement. At this setting the typical sequence of aquifers - a regolith aquifer at the top and a fractured bedrock aquifer at the bottom - is encountered, which is found in basement areas all over Africa and elsewhere in the world. The chosen regional approach revealed important information about the hydrochemistry and hydrogeology of this catchment. Based on the regional conceptual model a numerical groundwater flow model was designed. The numerical model was used to estimate the impact of climate change on the regional groundwater resources. This study was realised within the framework of the German interdisciplinary research project IMPETUS (English translation: "Integrated approach to the efficient management of scarce water resources in West Africa"), which is jointly managed by the German universities of Bonn and Cologne. Since the year 2000 the Upper Ouémé catchment was the principal target for investigations into the relevant processes of the regional water cycle. A first study from 2000 to 2003 (Fass, 2004, http://nbn-resolving.de/urn:nbn:de:hbz:5n-03849) focused on the hydrogeology of a small local catchment (~30 km**2). In the course of this thesis five field campaigns were underdone from the year 2004 to 2006. In the beginning of 2004 a groundwater monitoring net was installed based on 12 automatic data loggers. Manual piezometric measurements and the sampling of groundwater and surface water were realised for each campaign throughout the whole study area. Water samples were analysed for major ions, for a choice of heavy metals and for their composition by deuterium, oxygen-18 and tritium. The numerical model was performed with FEFLOW. The hydraulic and hydrochemical characteristics were described for the regolith aquifer and the bedrock aquifer. The regolith aquifer plays the role of the groundwater stock with low conductivity while the fractures of the bedrock may conduct water relatively fast towards extraction points. Flow in fractures of the bedrock depends on the connectivity of the fracture network which might be of local to subregional importance. Stable isotopes in combination with hydrochemistry proved that recharge occurs on catchment scale and exclusively by precipitation. Influx of groundwater from distant areas along dominant structures like the Kandi fault or from the Atacora mountain chain is excluded. The analysis of tritium in groundwater from different depths revealed the interesting fact of the strongly rising groundwater ages. Bedrock groundwater may possibly be much older than 50 years. Equilibrium phases of the silicate weathering products kaolinite and montmorillonite showed that the deeper part of the regolith aquifer and the bedrock aquifer feature either stagnant or less mobile groundwater while the shallow aquifer level is influenced by seasonal groundwater table fluctuations. The hydrochemical data characterised this zone by the progressive change of the hydrochemical facies of recently infiltrated rainwater on its flow path into deeper parts of the aquifers. Surprisingly it was found out that seasonal influences on groundwater hydrochemistry are minor, mainly because they affect only the groundwater levels close to the surface. The transfer of the hydrogeological features of the Upper Ouémé catchment into a regional numerical model demanded a strong simplification. Groundwater tables are a reprint of the general surface morphology. Pumping or other types of groundwater extraction would have only very local impact on the available groundwater resources. It was possible to integrate IMPETUS scenario data into the groundwater model. As a result it was shown that the impact of climate change on the groundwater resources until the year 2025 under the given conditions will be negligible due to the little share of precipitation needed for recharge and the low water needs for domestic use. Reason for concern is the groundwater quality on water points in the vicinity of settlements because of contamination by human activities as shown for the village of Dogué. Nitrate concentrations achieved in many places already alerting levels. Health risks from fluoride or heavy metals were excluded for the Upper Ouémé area.

Tiresias en Villa Inflamable. Hacia una cronografía de la dominación

Este artículo explora los lazos entre el sufrimiento ambiental, la dominación social y las percepciones colectivas del tiempo en base al trabajo etnográfico realizado a lo largo de 30 meses en Villa Inflamable, un barrio pobre y altamente contaminado de la Argentina. El artículo muestra que los modos en que los habitantes de esta villa piensan y sienten la contaminación (y el modo en que conviven con ella) están profundamente entrelazados con sus percepciones sobre el futuro. En consecuencia, el trabajo propone que un análisis etnográfico de las experiencias vividas de la contaminación también debe ser una cronografía -i.e. una descripción densa del orden socio-temporal vernáculo.

Tiresias en Villa Inflamable. Hacia una cronografía de la dominación

Este artículo explora los lazos entre el sufrimiento ambiental, la dominación social y las percepciones colectivas del tiempo en base al trabajo etnográfico realizado a lo largo de 30 meses en Villa Inflamable, un barrio pobre y altamente contaminado de la Argentina. El artículo muestra que los modos en que los habitantes de esta villa piensan y sienten la contaminación (y el modo en que conviven con ella) están profundamente entrelazados con sus percepciones sobre el futuro. En consecuencia, el trabajo propone que un análisis etnográfico de las experiencias vividas de la contaminación también debe ser una cronografía -i.e. una descripción densa del orden socio-temporal vernáculo.

Tiresias en Villa Inflamable. Hacia una cronografía de la dominación

Este artículo explora los lazos entre el sufrimiento ambiental, la dominación social y las percepciones colectivas del tiempo en base al trabajo etnográfico realizado a lo largo de 30 meses en Villa Inflamable, un barrio pobre y altamente contaminado de la Argentina. El artículo muestra que los modos en que los habitantes de esta villa piensan y sienten la contaminación (y el modo en que conviven con ella) están profundamente entrelazados con sus percepciones sobre el futuro. En consecuencia, el trabajo propone que un análisis etnográfico de las experiencias vividas de la contaminación también debe ser una cronografía -i.e. una descripción densa del orden socio-temporal vernáculo.

(Table 1) Polychlorinated biphenyl (PCB) and PCB metabolite concentrations in ringed seals (Phoca hispida) from Svalbard and the Baltic Sea

Polychlorinated biphenyls (PCBs) may induce activity of hepatic enzymes, mainly Phase I monooxygenases and conjugating Phase II enzymes, that catalyze the metabolism of PCBs leading to formation of metabolites and to potential adverse health effects. The present study investigates the concentration and pattern of PCBs, the induction of hepatic phase I and II enzymes, and the formation of hydroxy (OH) and methylsulfonyl (CH3SO2=MeSO2) PCB metabolites in two ringed seal (Phoca hispida) populations, which are contrasted by the degree of contamination exposure, that is, highly contaminated Baltic Sea (n = 31) and less contaminated Svalbard (n = 21). Phase I enzymes were measured as ethoxyresorufin-O-deethylation (EROD), benzyloxyresorufin-O-dealkylation (BROD), methoxyresorufin-O-demethylation (MROD), and pentoxyresorufin-O-dealkylation (PROD) activities, and phase II enzymes were measured as uridine diphosphophate glucuronosyl transferase (UDPGT) and glutathione-S-transferase (GST). Geographical comparison, multivariate, and correlation analysis indicated that sum-PCB had a positive impact on Phase I enzyme and GST activities leading to biotransformation of group III (vicinal ortho-meta-H atoms and <=1 ortho-chlorine (Cl)) and IV PCBs (vicinal meta-para-H atoms and <=2 ortho-Cl). The potential precursors for the main OH-PCBs detected in plasma in the Baltic seals were group III PCBs. MeSO2-PCBs detected in liver were mainly products of group IV PCB metabolism. Both CYP1A- and CYP2B-like enzymes are suggested to be involved in the PCB biotransformation in ringed seals.

Optimización del Abonado Nitrogenado en el Melón (Cucumis Melo L.) Tipo Piel de Sapo

Spain is the fifth-largest producer of melon (Cucumis melo L.) and the second exporter in the world. To a national level, Castilla-La Mancha emphasize and, specifically, Ciudad Real, where is cultivated 27% of national area dedicated to this crop and 30% of melon national production. Melon crop is cultivating majority in Ciudad Real and it is mainly located in the Alto Guadiana, where the major aquifers of the region are located, the aquifer 23 or Mancha Occidental and the aquifer 24 or Campo de Montiel, both declared overexploited and vulnerable zones to nitrate pollution from agricultural sources. The problem is exacerbated because in this area, groundwater is the basic resource of supply to populations, and even often the only one. Given the importance of melon in the area, recent research has focused on the irrigation of melon crop. Unfortunately, scant information has been forthcoming on the effect of N fertilizer on melon piel de sapo crop, so it is very important to tackle in a serious study that lead to know the N requirements on the melon crop melon by reducing the risks of contamination by nitrate leaching without affecting productivity and crop quality. In fact, the recommended dose is often subjective and practice is a N overdose. In this situation, the taking of urgent measures to optimize the use of N fertilization is required. To do it, the effect of N in a melon crop, fertirrigated and on plastic mulch, was studied. The treatments consisted in different rates of N supply, considering N fertilizer and N content in irrigation water, so the treatment applied were: 30 (N30), 85 (N85), 112 (N112) and 139 (N139) Kg N ha-1 in 2005; 93 (N93), 243 (N243) and 393 (N393) kg ha-1 in 2006; and 11 (N11), 61 (N61), 95 (N95) and 148 (N148) kg ha-1 in 2007. A randomized complete-block design was used and each treatment was replicated four times. The results showed a significant effect of N on dry biomass and two patterns of growth were observed. On the one hand, a gradual increase in vegetative biomass of the plant, leaves and stem, with increasing N, and on the other hand, an increase of fruit biomass also with increasing N up to a maximum of biomass corresponding to the optimal dose determined in 90 kg ha-1 of N applied, corresponding to 160 kg ha-1 of N available for melon crop, since this optimum dose, the fruit biomass suffers a decline. A significant effect was observed in concentration and N uptake in leaf, steam, fruit and whole plant, increasing in all of them with increasing of N doses. Fast N uptake occurred from 30-35 to 70-80 days after transplanting, coinciding with the fruit development. The N had a clear influence on the melon yield, its components, skin thickness and flesh ratio. The melon yield increased, as the mean fruit weight and number of fruits per m2 with increasing N until achieve an above 95% of the maximum yield when the N applied is 90 kg ha-1 or 160 kg ha-1 of N available. When N exceeds the optimal amount, there is a decline in yield, reducing the mean fruit weight and number of fruits per square meter, and was also observed a decrease in fruit quality by increasing the skin thickness and decrease the flesh ratio, which means an increase in fruit hollowed with excessive N doses. There was a trend for all indexes of N use efficiency (NUE) to decline with increasing N rate. We observed two different behaviours in the calculation result of the NUE; on the one hand, all the efficiency indexes calculated with N applied and N available had an exponential trend, and on the other hand, all the efficiency indexes calculated with N uptake has a linear trend. The linear regression cuts the exponential curve, delimiting a range within which lies the optimum quantity of N. The N leaching as nitrates increased exponentially with the amount of N. The increase of N doses was affected on the N mineralization. There was a negative exponential effect of N available on the mineralization of this element that occurs in the soil during the growing season, calculated from the balances of this element. The study of N leaching for each N rate used, allowed to us to establish several environmental indices related to environmental risk that causes the use of such doses, a simple way for them to be included in the code of Best Management Practices.

An Alternative Method to Achieve Metrological Confirmation in Measurement Processes

Metrological confirmation process must be designed and implemented to ensure that metrological characteristics of the measurement system meet metrological requirements of the measurement process. The aim of this paper is to present an alternative method to the traditional metrological requirements about the relationship between tolerance and measurement uncertainty, to develop such confirmation processes. The proposed way to metrological confirmation considers a given inspection task of the measurement process into the manufacturing system, and it is based on the Index of Contamination of the Capability, ICC. Metrological confirmation process is then developed taking into account the producer risks and economic considerations on this index. As a consequence, depending on the capability of the manufacturing process, the measurement system will be or will not be in adequate state of metrological confirmation for the measurement process.

Identificación de los riesgos ambientales y sanitarios de la producción de gas mediante fracturación hidráulica y bases para una propuesta metodológica de vulnerabilidad de las aguas subterráneas

Hasta ahora, la gran mayoría de los recursos explotados de gas natural procedían de acumulaciones convencionales de gas aislado y de gas asociado y disuelto en el petróleo. Sin embargo, el gas natural se encuentra también en yacimientos que, debido a su baja porosidad y permeabilidad, tienen unas características que hacen que hasta muy recientemente no hayan sido económicamente rentables y que sólo puedan ser explotados mediante técnicas no convencionales, dando lugar al denominado gas no convencional. Las técnicas utilizadas para su extracción son la fracturación hidráulica o “fracking” y la perforación horizontal. Entre los diversos tipos de gas no convencional, es de prever que el gas de pizarra sea el que sufra mayor desarrollo a medio plazo en nuestro país, por lo que se están generando grandes debates, debido al riesgo de contaminación de las aguas superficiales y subterráneas del entorno, provocados por la elevada cantidad de agua utilizada, los aditivos empleados, los fluidos de retorno, por la alteración del medio físico, así como por la dificultad de monitorización de estos procesos. En este proyecto se identifican los riesgos ambientales y sanitarios asociados a la extracción de gas no convencional. El trabajo se basa principalmente en experiencias ocurridas en países donde el fracking se ha convertido en una práctica habitual. Se trata además de establecer las bases necesarias para la estimación de la vulnerabilidad de los acuíferos frente a la contaminación inducida por la fracturación hidráulica. Abstract Until now, most of the natural gas resources exploited were from isolated conventional gas accumulations and associated and dissolved gas in oil. However, the natural gas is also in reservoirs that, due to their low porosity and permeability, have characteristics that make until recently not been economically profitable and can be exploited only by unconventional techniques, leading to the so called unconventional gas. The techniques used for extraction are hydraulic fracturing or "fracking" and horizontal drilling. Among the various types of unconventional gas, it is expected that shale gas is the suffering greater medium-term development in our country, so it is generating much debate, due to the risks of contamination in surface waters and subterranean environment, caused by the high amount of water used, the additives used, the return fluid, by altering the physical environment, and the difficulty of monitoring these processes. In this project identifies the environmental and health risks associated with unconventional gas extraction. The work is mainly based on experiences that occurred in countries where fracking has become a common practice. This is for establish the necessary basis for estimating the vulnerability of aquifers from contamination induced by hydraulic fracturing.

Precipitated iron: a limit on gettering efficacy in multicrystalline silicon

A phosphorus diffusion gettering model is used to examine the efficacy of a standard gettering process on interstitial and precipitated iron in multicrystalline silicon. The model predicts a large concentration of precipitated iron remaining after standard gettering for most as-grown iron distributions. Although changes in the precipitated iron distribution are predicted to be small, the simulated post-processing interstitial iron concentration is predicted to depend strongly on the as-grown distribution of precipitates, indicating that precipitates must be considered as internal sources of contamination during processing. To inform and validate the model, the iron distributions before and after a standard phosphorus diffusion step are studied in samples from the bottom, middle, and top of an intentionally Fe-contaminated laboratory ingot. A census of iron-silicide precipitates taken by synchrotron-based X-ray fluorescence microscopy confirms the presence of a high density of iron-silicide precipitates both before and after phosphorus diffusion. A comparable precipitated iron distribution was measured in a sister wafer after hydrogenation during a firing step. The similar distributions of precipitated iron seen after each step in the solar cell process confirm that the effect of standard gettering on precipitated iron is strongly limited as predicted by simulation. Good agreement between the experimental and simulated data supports the hypothesis that gettering kinetics is governed by not only the total iron concentration but also by the distribution of precipitated iron. Finally, future directions based on the modeling are suggested for the improvement of effective minority carrier lifetime in multicrystalline silicon solar cells.

Estudio de la estabilidad genética asociada a los procesos de crioconservación de ápices de menta

La crioconservación se ha descrito como una técnica de conservación ex situ a largo plazo que ha sido aplicada con éxito a numerosas especies, y resulta especialmente importante en aquellas con propagación vegetativa, infértiles o amenazadas, en las que sistemas de conservación ex situ más sencillos, como los bancos de semillas, no son posibles. También presenta ventajas frente a la conservación in vitro, ya que logra disminuir o eliminar problemas como la excesiva manipulación del material, evitando los subcultivos periódicos y disminuyendo así el riesgo de contaminaciones y de aparición de variación somaclonal. Sin embargo, someter al material vegetal a los procedimientos que implica la crioconservación provoca distintos estreses. Entre ellos, el estrés oxidativo puede potencialmente producir daños en membranas, proteínas, carbohidratos y en el ADN. En este trabajo se han evaluado diversos sistemas de crioconservación en ápices de Mentha × piperita L., híbrido estéril entre Mentha aquatica L. y Mentha spicata L. Se han utilizado ápices de dos genotipos (‘MEN 186’y ‘MEN 198’) en los cuales se compararon dos técnicas de crioconservación, encapsulación-deshidratación y vitrificación-droplet. El análisis de la supervivencia y capacidad de regeneración del material sometido a los tratamientos de crioconservación, junto con el análisis de la estabilidad genética de dicho material mediante marcadores moleculares (RAPD y AFLP) han permitido comparar los distintos protocolos y tratamientos establecidos. El estudio sobre el tipo de protocolo empleado reveló una mayor variabilidad genética en la técnica de encapsulación-deshidratación, especialmente en el genotipo ‘MEN 186’, ya que ‘MEN 198’ resultó ser más estable en todos los análisis. La inestabilidad encontrada en esta técnica no fue exclusiva de aquellos explantos crioconservados, sino que los pasos previos a la inmersión en nitrógeno líquido (NL) también provocaron variaciones en el ADN. Según el tipo de muestra analizada se encontraron diferencias en la estabilidad: muestras provenientes de callos presentaron una mayor inestabilidad que aquellas de hojas (brotes). Se utilizaron tres medios para la recuperación de los ápices tras la crioconservación con el uso de diferentes combinaciones de reguladores de crecimiento: “Reed” (0,5 mgL-1 6-bencilaminopurina, BAP), “Senula” (0,5 mgL-1 6-dimetilalilamino-purina, 2-iP + 0,1 mgL-1 ácido α-naftalen-acético, ANA) y “Nudos” (0,5 mgL-1 BAP + 0,1 mgL-1ANA). El medio “Reed” produjo un aumento en la supervivencia y recuperación de los ápices en ambos genotipos y técnicas, y disminuyó la formación de callo. Sin embargo, no tuvo un efecto significativo en la estabilidad genética. El medio “Senula” provocó una mayor estabilidad genética en el genotipo más inestable, ‘MEN 186’. Para reducir el daño oxidativo producido durante la encapsulación-deshidratación, e incrementar la recuperación de los ápices manteniendo su estabilidad genética, se comparó el efecto de añadir sustancias antioxidantes en el precultivo de los ápices (ácido ascórbico, vitamina E y glutatión). No se obtuvo la respuesta esperada y estos tratamientos no presentaron efectos significativos tanto en la estabilidad como en la recuperación. Para entender mejor qué sucede durante todo el proceso de encapsulación-deshidratación, se evaluó cada paso del protocolo por separado y su efecto en la estabilidad y la recuperación. Además, se determinó el estado de oxidación en cada etapa mediante la cuantificación de malondialdehído y la detección de la formación de radicales libres (mediante el ensayo del ácido tiobarbitúrico, y sondas fluorescentes específicas, respectivamente). Se determinó que a partir de los primeros pasos se genera estrés oxidativo, el cual aumenta a medida que se avanza por el protocolo hasta la inmersión en nitrógeno líquido. Esto se ve reflejado en la disminución progresiva tanto de la recuperación como de la estabilidad genética. Con el uso de antioxidantes en el precultivo (ácido ascórbico y vitamina E) no se obtuvo un efecto positivo en el mantenimiento de la estabilidad genética, y tan sólo con el uso de vitamina E se observó una recuperación mayor en uno de los pasos estudiados (después de la desecación). Sin embargo, cuando se utilizó ácido ascórbico durante el precultivo o la deshidratación osmótica se consiguió disminuir de forma significativa la formación de MDA y la acumulación del radical superóxido (O2•-) en la mayoría los pasos analizados, aunque esta reducción no parece tener un efecto directo en la estabilidad genética del material recuperado. ABSTRACT Cryopreservation has been described as an effective technique for the long term of ex situ conservation that has been successfully applied to numerous species, and is of especial relevance for those with vegetative propagation, infertile or endangered, in which simpler systems of ex situ conservation, such as seed banking, are not feasible. It also has advantages over in vitro conservation, as it reduces or eliminates excessive material handling, avoids periodic subcultures and thus limits the risk of contamination and the appearance of somaclonal variation. However, plant material is subjected to different treatments involved in the cryopreservation procedures, which impose several stresses. Among them, oxidative stress can potentially cause damage to membranes, proteins, carbohydrates and DNA. In this work, two cryopreservation techniques have been evaluated in Mentha × piperita L. shoot tips, sterile hybrid between Mentha aquatica L. and Mentha spicata L. Two genotypes ('MEN 186' and 'MEN 198') were used to compare two techniques: encapsulation-dehydration and droplet-vitrification. The analysis of survival and recovery capacity of the material after the cryopreservation treatments, and the analysis of the genetic stability by molecular markers (RAPD and AFLP) have enabled the comparison between protocols and treatments. The study of the two cryopreservation procedures revealed a higher genetic variability in the encapsulation-dehydration technique, especially in genotype 'MEN 186', as 'MEN 198' was more stable in all analyses. The instability generated in this technique was not exclusive of cryopreserved explants, pretreatments prior to immersion in NL also caused DNA variations. The type of sampled plant material revealed also differences in the stability: callus samples showed greater instability than shoots. Three different culture media were used for the recovery of shoot tips after cryopreservation, using different combinations of growth regulators: "Reed" (0.5 mgL-1 6-benzylaminopurine, BAP), "Senula" (0.5 mgL-1 6-dimetilalilamino-purine, 2-iP + 0.1 mgL-1 α-naphthalene acetic acid, ANA) and "Nodes" (0.5 mgL-1 BAP + 0.1 mgL-1 ANA). "Reed" medium increased survival and recovery of shoot tips in both genotypes and techniques and decreased callus formation. However, it didn`t have a significant effect on genetic stability. "Senula" medium caused a higher genetic stability in the most unstable genotype, 'MEN 186'. To reduce oxidative damage during encapsulation-dehydration, and increase shoot tip recovery and maintain genetic stability, the effect of added antioxidants (ascorbic acid, vitamin E and glutathione) in the shoot tip preculture medium was studied. These treatments had no significant effect on both stability and recovery. To better understand the events during the encapsulation-dehydration process, the effect of each step of the protocol on stability and recovery was evaluated separately. Moreover, the oxidation level was determined by quantifying malondialdehyde (MDA) formation and detecting free radical accumulation (using the thiobarbituric acid assay, and specific fluorescent probes, respectively). The oxidative stress was detected from the first steps and increased throughout the protocol until the immersion in liquid nitrogen. This was also reflected in the gradual decline of recovery and genetic stability. The use of antioxidants (ascorbic acid and vitamin E) in the shoot tip preculture medium had no effect in maintaining genetic stability; only vitamin E increased recovery in one of the steps studied (after desiccation). However, when ascorbic acid was used during the preculture or during the osmotic dehydration, a significantly decrease was observed in MDA formation and superoxide radical accumulation in most of the steps analyzed, although this reduction did not seem to have a direct effect on the genetic stability of recovered material.

Desarrollo y Caracterización del Método de Dinamolisis Capilar para el Análisis de Suelos Contaminados: estudio de los suelos de Linares

El establecimiento de políticas de vigilancia y protección del suelo exige la validación de métodos de análisis eficaces para determinar la calidad del suelo y hacer posible su evaluación en relación con su estado de contaminación. Para poder caracterizar el suelo desde el punto de vista de su vitalidad, se han investigado los Métodos de Formación de Imágenes (Bildschaffende Methode) y en particular los métodos de Dinamolisis Capilar (Steigbild Methode) desarrollados por L. Kolisko. Partiendo de la configuración horizontal conocida como Chroma-Test, propuesta por E. Pfeiffer, se han identificado las modificaciones del método original que hacen posible su validación. A continuación se han verificado realizando ensayos ciegos colaborativos y comparando los resultados con los obtenidos por otros métodos experimentales utilizados para evaluar la fertilidad del suelo. Como caso práctico se presenta una investigación en el antiguo distrito minero de plomo de Linares, situado en Jaén, España. Esta investigación sienta las bases para un avance significativo en la evaluación de los suelos y su posible calificación como contaminados. El método Horizontal de Dinamolisis Capilar propuesto permite identificar de forma simple y directa los efectos inhibidores de las funciones del suelo debidas tanto a la contaminación puntual o local como a la contaminación difusa. AB S TRACT Establishing policies for Soil protection and monitoring, requires the validation of effective analytical methods for determining soil quality and assess the state of contamination. The possibilities of Image Forming Methods (Bildschaffende Methode), and in particular the methods of Capillary Dynamolysis (Steigbild Methode) of L. Kolisko have been investigated in order to characterize soil quality from the point of view of its vitality. Based on the horizontal configuration known as Chroma-Test, proposed by E. Pfeiffer, the amendments to the original method that enable validation have been identified, and then verified through collaborative blind tests and through comparison with results provided by other experimental methods often used in agriculture to assess soil quality. As a case study the investigation at the former lead mining district of Linares, located in Jaen, Spain, is presented. This research lays the groundwork for significant progress in the assessment of soils and their possible declaration as contaminated. The proposed Horizontal Capyllary Dynamolysis Method allows to identify in a simple and direct way the inhibiting effects on soil functions due to both local contamination and/or diffuse contamination.

Identificazione di miRNA correlati ad EGFR: nuovi potenziali biomarcatori di risposta alla terapia di 2a-3a linea in pazienti con NSCLC metastatico

La diagnosi di neoplasia epiteliale maligna polmonare è legata tradizionalmente alla distinzione tra carcinoma a piccole cellule (small-cell lung cancer, SCLC) e carcinoma non-a piccole cellule del polmone (non-small-cell lung cancer, NSCLC). Nell’ambito del NSCLC attualmente è importante di-stinguere l’esatto istotipo (adenocarcinoma, carcinoma squamocellulare e carcinoma neuroendocrino) perchè l’approccio terapeutico cambia a seconda dell’istotipo del tumore e la chemioterapia si dimostra molto spesso inefficace. Attualmente alcuni nuovi farmaci a bersaglio molecolare per il gene EGFR, come Erlotinib e Gefitinib, sono utilizzati per i pazienti refrattari al trattamento chemioterapico tradizionale, che non hanno risposto a uno o più cicli di chemioterapia o che siano progrediti dopo questa. I test per la rilevazione di specifiche mutazioni nel gene EGFR permettono di utilizzare al meglio questi nuovi farmaci, applicandoli anche nella prima linea di trattamento sui pazienti che hanno una maggiore probabilità di risposta alla terapia. Sfortunatamente, non tutti i pazienti rispondono allo stesso modo quando trattati con farmaci anti-EGFR. Di conseguenza, l'individuazione di biomarcatori predittivi di risposta alla terapia sarebbe di notevole importanza per aumentare l'efficacia dei questi farmaci a target molecolare e trattare con farmaci diversi i pazienti che con elevata probabilità non risponderebbero ad essi. I miRNAs sono piccole molecole di RNA endogene, a singolo filamento di 20-22 nucleotidi che svolgono diverse funzioni, una delle più importanti è la regolazione dell’espressione genica. I miRNAs possono determinare una repressione dell'espressione genica in due modi: 1-legandosi a sequenze target di mRNA, causando così un silenziamento del gene (mancata traduzione in proteina), 2- causando la degradazione dello specifico mRNA. Lo scopo della ricerca era di individuare biomarcatori capaci di identificare precocemente i soggetti in grado di rispondere alla terapia con Erlotinib, aumentando così l'efficacia del farmaco ed evitan-do/riducendo possibili fenomeni di tossicità e il trattamento di pazienti che probabilmente non ri-sponderebbero alla terapia offrendo loro altre opzioni prima possibile. In particolare, il lavoro si è fo-calizzato sul determinare se esistesse una correlazione tra la risposta all'Erlotinib ed i livelli di espressione di miRNAs coinvolti nella via di segnalazione di EGFR in campioni di NSCLC prima dell’inizio della terapia. Sono stati identificati 7 microRNA coinvolti nel pathway di EGFR: miR-7, -21, 128b, 133a, -133b, 146a, 146b. Sono stati analizzati i livelli di espressione dei miRNA mediante Real-Time q-PCR in campioni di NSCLC in una coorte di pazienti con NSCLC metastatico trattati con Erlotinib dal 1° gennaio 2009 al 31 dicembre 2014 in 2°-3° linea dopo fallimento di almeno un ciclo di chemioterapia. I pazienti sottoposti a trattamento con erlotinib per almeno 6 mesi senza presentare progressione alla malattia sono stati definiti “responders” (n=8), gli altri “non-responders” (n=25). I risultati hanno mostrato che miR-7, -133b e -146a potrebbero essere coinvolti nella risposta al trat-tamento con Erlotinib. Le indagini funzionali sono state quindi concentrate su miR-133b, che ha mo-strato la maggiore espressione differenziale tra i due gruppi di pazienti. E 'stata quindi studiata la capacità di miR-133b di regolare l'espressione di EGFR in due linee di cellule del cancro del polmone (A549 e H1299). Sono stati determinati gli effetti di miR-133b sulla crescita cellulare. E’ stato anche analizzato il rapporto tra miR-133b e sensibilità a Erlotinib nelle cellule NSCLC. L'aumento di espressione di miR-133b ha portato ad una down-regolazione del recettore di EGF e del pathway di EGFR relativo alla linea cellulare A549. La linea cellulare H1299 era meno sensibili al miR-133b up-regulation, probabilmente a causa dell'esistenza di possibili meccanismi di resistenza e/o di com-pensazione. La combinazione di miR-133b ed Erlotinib ha aumentato l'efficacia del trattamento solo nella linea cellulare A549. Nel complesso, questi risultati indicano che miR-133b potrebbe aumentare / ripristinare la sensibilità di Erlotinib in una frazione di pazienti.