Iowa 100% E News, April 2001, Vol.1, no.3

Newsletter for Information Technology Department

Iowa 100% E News, May/June 2001, Vol.1, no.4

Newsletter for Information Technology Department

Iowa 100% E News, July/August 2001, Vol.1, no.5

Newsletter for Information Technology Department

Iowa 100% E News, August/September 2001, Vol.1, no.6

Newsletter for Information Technology Department

Iowa 100% E News, December 2001, Vol.1 no.8

Newsletter for Information Technology Department

Walter Ross [boxeur anglais, s'entraînant salle Cré, rue Rodier, à Paris] : [photographie de presse] / [Agence Rol]

Référence bibliographique : Rol, 57121

L'imperator, ex-paquebot allemand qui fait son premier voyage sous le pavillon anglais de Liverpool à New-York : [photographie de presse] / [Agence Rol]

Référence bibliographique : Rol, 58213

Complex organization of CTF/NF-I, C/EBP, and HNF3 binding sites within the promoter of the liver-specific vitellogenin gene.

Vitellogenin genes are expressed specifically in the liver of female oviparous vertebrates under the strict control of estrogen. To explain this tissue-specific expression, we performed a detailed analysis of the Xenopus laevis vitellogenin gene B1 promoter by DNase I footprinting and gel mobility-shift assays. We characterized five binding sites for the ubiquitous factor CTF/NF-I. Two of these sites are close to the TATA-box, whereas the others are located on both sides of the estrogen responsive unit formed by two imperfect estrogen response elements. Moreover two liver-enriched factors, C/EBP and HNF3, were found to interact with multiple closely spaced proximal promoter elements in the first 100 base pairs upstream of the TATA-box. To confirm the physiological significance of this in vitro analysis, in vivo DNase I footprinting experiments were carried out using the ligation-mediated polymerase chain reaction technique. The various cis-elements characterized in vitro as binding sites for known transcription factors and more particularly for liver-enriched transcription factors are efficiently recognized in vivo as well, suggesting that they play an important role in the control of the liver-specific vitellogenin gene B1 expression.

Disseny i implementació de la base de dades d'un sistema de descàrrega d'aplicacions per a mòbils intel·ligents

Disseny i implementació de la base de dades d'un sistema de descàrrega d'aplicacions per a mòbils intel·ligents.

Disseny i implementació de la base de dades d'un sistema de descàrrega d'aplicacions per a mòbils intel·ligents

En aquest projecte es recullen totes les fases necessàries per dissenyar i implementar una base de dades relacional que asseguri la persistència de les dades relatives a les entitats implicades.

Probabilistic base calling of Solexa sequencing data.

BACKGROUND: Solexa/Illumina short-read ultra-high throughput DNA sequencing technology produces millions of short tags (up to 36 bases) by parallel sequencing-by-synthesis of DNA colonies. The processing and statistical analysis of such high-throughput data poses new challenges; currently a fair proportion of the tags are routinely discarded due to an inability to match them to a reference sequence, thereby reducing the effective throughput of the technology. RESULTS: We propose a novel base calling algorithm using model-based clustering and probability theory to identify ambiguous bases and code them with IUPAC symbols. We also select optimal sub-tags using a score based on information content to remove uncertain bases towards the ends of the reads. CONCLUSION: We show that the method improves genome coverage and number of usable tags as compared with Solexa's data processing pipeline by an average of 15%. An R package is provided which allows fast and accurate base calling of Solexa's fluorescence intensity files and the production of informative diagnostic plots.

Nice [la Promenade des Anglais fréquentée] : [photographie de presse] / [Agence Rol]

Référence bibliographique : Rol, 57741

Using a Parameterization of a Radiative Transfer Model to Build High-Resolution Maps of Typical Clear-Sky UV Index in Catalonia, Spain

To perform a climatic analysis of the annual UV index (UVI) variations in Catalonia, Spain (northeast of the Iberian Peninsula), a new simple parameterization scheme is presented based on a multilayer radiative transfer model. The parameterization performs fast UVI calculations for a wide range of cloudless and snow-free situations and can be applied anywhere. The following parameters are considered: solar zenith angle, total ozone column, altitude, aerosol optical depth, and single-scattering albedo. A sensitivity analysis is presented to justify this choice with special attention to aerosol information. Comparisons with the base model show good agreement, most of all for the most common cases, giving an absolute error within 0.2 in the UVI for a wide range of cases considered. Two tests are done to show the performance of the parameterization against UVI measurements. One uses data from a high-quality spectroradiometer from Lauder, New Zealand [45.04°S, 169.684°E, 370 m above mean sea level (MSL)], where there is a low presence of aerosols. The other uses data from a Robertson–Berger-type meter from Girona, Spain (41.97°N, 2.82°E, 100 m MSL), where there is more aerosol load and where it has been possible to study the effect of aerosol information on the model versus measurement comparison. The parameterization is applied to a climatic analysis of the annual UVI variation in Catalonia, showing the contributions of solar zenith angle, ozone, and aerosols. High-resolution seasonal maps of typical UV index values in Catalonia are presented