Molecular systematics and historical biogeography of the Black-browed Barbet species complex (Megalaima oorti)

Although Southeast Asia is a global biodiversity hotspot, the tempo and mode of avian diversification there has not been well studied. We investigated the history of the diversification of an endemic Asian tropical bird, the Black-browed Barbet Megalaima

Composition, biomass, distribution and population structure of the fish stocks

Until the 1970s, Lake Victoria had a multi-species fishery dominated by the tilapiine and haplochromine cichlids. There were important subsidiary fisheries for more than 20 genera of non-cichlid fishes, including catfishes (Bagrus docmak, Clarias gariepinus, Synodontis spp and Schilbe intermedius), the lungfish (Protopterus aethiopicus) and Labeo victorianus) (Kudhongania and Cordone 1974). Stocks of most of these species declined and others disappeared following the introduction of four tilapiines (Oreochromis niloticus, Oreochromis leucostictus, Tilapia rendalli and Tilapia zillit) and Nile perch (Lates niloticus) during the 1950s. Since then the commercial fishery in the Uganda portion of Lake Victoria has been dominated by the Nile perch, Nile tilapia (Oreochromis niloticus) and the native cyprinid species, Rastrineobola argentea (Mukene).

The socio-economic and cultural structures of the fisherfolk communities

Fishing communities that have exploited the resource for generations constitute the main stakeholder groups in the fisheries of Lake Victoria. Several studies have examined Uganda's Lake Victoria fishing communities and characterised key stakeholders at community level over the last decade (SEDAWOG 1999a and b; Geheb 1997; FeSEP 1997; Kitakule 1991). The communities are made up of scattered settlements at the shores and on islands. The categories of people living in these communities include fishers who consist primarily of large numbers of male youths who provide labour to boat and gear owners. There are resident and non-resident fish traders who after securing their supplies at the beaches, depart for their market destinations. In addition, there are fish processors, mostly operating traditional and improved smoking kilns. Many other people, dealing in provisions and supplies also stay at the beaches, their activities depending on the level of fish catch. The fishing communities of Lake Victoria, Uganda, include auxiliary livelihood activities such as boat building, net repairing and transportation; bait supply and beachside kiosks, video halls and retail shop business. Other economic activities are brick making, charcoal burning/wood trade, farming and livestock keeping.

Human activities and interests within and around lakes of the Victoria and Kyoga basin and their consequences to sustainable fish production

Of all the great lakes, Lake Victoria has the highest population concentration on its fringes. This has resulted into serious human impacts on the ecosystem through intense agricultural activities (cultivation, livestock and over fishing), sporadic settlements, urbanization and industrial establishments. The consequences have been loss of animals and plant life, deforestation and general land degradation, pollution, loss of water quality and clean air. Aquatic life has become endangered and less guaranteeing to continued fish production. Awareness workshops and general talks have been done to a few selected communities by the lakes landing sites and in the catchment area to mitigate the deteriorating environmental conditions. Naturally the situation calls for reversal to the increasing stress of the ecosystem. As a result, every water body surveyed put forward some mitigation suggestions

Current composition, distribution and relative abundance of the fish stocks of Lake Victoria, Uganda

An experimental bottom trawl survey was carried out in the Uganda sector of Lake Victoria during the period May 1993 through May 1995 with the aim of establishing the current composition, distribution and abundance of the fish stocks. A total of 205 successful one-hour hauls were taken using the 25.4mm mesh size codend trawl net during the 19 cruises. Fourteen fish taxa (excluding the haplochromines) were recorded with Lates niloticus constituting the bulk (97 %) of the fish retained. Haplochromines and L. nilolicus were encountered in all areas sampled while Nile tilapia (Oreochromis niloticus) and other tilapiines were restricted to waters less than 20 metres deep. An average catch of 154 kg/hr was obtained in waters less than 30 metres deep. Species diversity and relative abundance varied with depth. Only two of the fifteen fish taxa (haplochromines and L.niloticus) were recorded in waters deeper than 30 metres and the bulk of the fish by weight (92 %) was obtained in waters less than 30 metres.

Lakes Wamala and Kijanebalola: evaluation of the fisheries resources during July 1975

This report presents the results of the second (in 1975) fisheries resource survey for Lake Wamala conducted from 10th to 16th July 1975. The first similar survey covered the period 14th to 20th May 1975. The areas sampled consisted of the river-month areas, the papyrus-fringed inshore waters and the open dee offshore waters. In an effort to find the possible major causes of the decline in catch and seasonal disappearance of fish-hence a solution to the problem(s)-a second fisheries resource survey using multifilament nylon gillnets was conducted on Lake Kijanebalola during the period 17th to 21st July 1975. The first survey was similar and covered the period 21st to 27th May 1975.

Psychometric evaluation and experimental validation of the statistics anxiety rating scale.

The Statistics Anxiety Rating Scale (STARS) was adapted into German to examine its psychometric properties (n = 400). Two validation studies (n = 66, n = 96) were conducted to examine its criterion-related validity. The psychometric properties of the questionnaire were very similar to those previously reported for the original English version in various countries and other language versions. Confirmatory factor analysis indicated 2 second-order factors: One was more closely related to anxiety and the other was more closely related to negative attitudes toward statistics. Predictive validity of the STARS was shown both in an experimental exam-like situation in the laboratory and during a real examination situation. Taken together, the findings indicate that statistics anxiety as assessed by the STARS is a useful construct that is more than just an expression of a more general disposition to anxiety.

The three dimensional structure and biological domains of the p53 C-terminus.

It was expected that there are a coil (289 similar to 325) and two a helix (alpha(1)368 similar to 373, alpha(2)381 similar to 388) structures in p53 protein C-terminal region based on its mRNA secondary structure template and Chou-Fasman's protein secondary structure principle of prediction. The result was conformed by the other four methods of protein secondary structure prediction that are based on the multiple sequence alignment (accuracy = 73.20%). Combine with the 31 amino acids crystal structure of the oligomerization, the three dimensional conformation of p53 C-terminal 108 residues was built using the SGI INDIGO(2) computer. This structure further expounds the relationship among those biological function domains of p53 C- terminus at three-dimensional level.

Structural and functional characterization of the human CCR5 receptor in complex with HIV gp120 envelope glycoprotein and CD4 receptor by molecular modeling studies

The entry of human immunodeficiency virus (HIV) into cells depends on a sequential interaction of the gp120 envelope glycoprotein with the cellular receptors CD4 and members of the chemokine receptor family. The CC chemokine receptor CCR5 is such a receptor for several chemokines and a major coreceptor for the entry of R5 HIV type-1 (HIV-1) into cells. Although many studies focus on the interaction of CCR5 with HIV-1, the corresponding interaction sites in CCR5 and gp120 have not been matched. Here we used an approach combining protein structure modeling, docking and molecular dynamics simulation to build a series of structural models of the CCR5 in complexes with gp120 and CD4. Interactions such as hydrogen bonds, salt bridges and van der Waals contacts between CCR5 and gp120 were investigated. Three snapshots of CCR5-gp120-CD4 models revealed that the initial interactions of CCR5 with gp120 are involved in the negatively charged N-terminus (Nt) region of CCR5 and positively charged bridging sheet region of gp120. Further interactions occurred between extracellular loop2 (ECL2) of CCR5 and the base of V3 loop regions of gp120. These interactions may induce the conformational changes in gp120 and lead to the final entry of HIV into the cell. These results not only strongly support the two-step gp120-CCR5 binding mechanism, but also rationalize extensive biological data about the role of CCR5 in HIV-1 gp120 binding and entry, and may guide efforts to design novel inhibitors.

Purification, characterization and biological activities of the L-amino acid oxidase from Bungarus fasciatus snake venom

L-Amino acid oxidases (LAAOs) are widely distributed in snake venoms, which contribute to the toxicity of venoms. However, LAAO from Bungarus fasciatus (B. fasciatus) snake venom has not been isolated previously. In the present study, LAAO from B. fasciat

Characterising the neutron and gamma responses of the NPL liquid scintillation detectors.

The absolute responses of the NPL liquid scintillation spectrometers to monoenergetic neutrons and gammas were measured at various energies in the ranges 1.2 - 17 MeV approximately for neutrons and 0.28 - 1.8 MeV for gammas. Additional measurements of the proton light output function were also carried out. Calculated responses were then obtained for the larger detector using the programs NRESP7 and PHRESP, and compared with the absolute measurements. Finally, response matrices for this detector were generated using responses calculated at closely spaced energies.