Acoustic multi-frequency indicator of four major groups on a spatial grid in the Bay of Biscay

The first data set contains the mean and cofficient of variation (standard deviation divided by mean) of a multi-frequency indicator I derived from ER60 acoustic information collected at five frequencies (18, 38, 70, 120, and 200 kHz) in the Bay of Biscay in May of the years 2006, 2008, 2009 and 2010 (Pelgas surveys). The multi-frequency indicator was first calculated per voxel (20 m long × 5 m deep sampling unit) and then averaged on a spatial grid (approx. 20 nm × 20 nm) for five 5-m depth layers in the surface waters (10-15m, 15-20m, 20-25m, 25-30m below sea surface); there are missing values in particular in the shallowest layer. The second data set provides for each grid cell and depth layer the proportion of voxels for which the multi-frequency indicator I was indicative of a certain group of organisms. For this the following interpretation was used: I < 0.39 swim bladder fish or large gas bubbles, I = 0.39-0.58 small resonant bubbles present in gas bearing organisms such as larval fish and phytoplankton, I = 0.7-0.8 fluidlike zooplankton such as copepods and euphausiids, and I > 0.8 mackerel. These proportions can be interpreted as a relative abundance index for each of the four organism groups.

Hydrocarbons in particulate matter and bottom sediments from the north Caspian Sea shelf

Data are presented on content and composition of hydrocarbons (HC) (aliphatic AHC and polyaromatic PAH) in filtered particulate matter and in the surface layer of bottom sediments from the northern shelf of the Caspian Sea and related to data on their contents in the Volga River estuary. Because of transformation and precipitation of anthropogenic and natural compounds, HC composition in particulate matter and bottom sediments undergoes transformations caused by mixing of fresh and saline waters (in bottom sediments, within concentration ranges 70.4-4557.9 µg/g for AHC and 3.8-4800 ng/g for PAH). It was found that the greatest concentrating of HC proceeds in the region of the avalanche sedimentation, and their contents are independent of grain-size types of bottom sediments. Anthropogenic HC (oil and pyrogenous) do not get over the marginal filter of the Volga River and do not pass to the open part of the sea.

Reference list of 120 datasets from time series station Payerne used for exploratory search

The analysis of time-dependent data is an important problem in many application domains, and interactive visualization of time-series data can help in understanding patterns in large time series data. Many effective approaches already exist for visual analysis of univariate time series supporting tasks such as assessment of data quality, detection of outliers, or identification of periodically or frequently occurring patterns. However, much fewer approaches exist which support multivariate time series. The existence of multiple values per time stamp makes the analysis task per se harder, and existing visualization techniques often do not scale well. We introduce an approach for visual analysis of large multivariate time-dependent data, based on the idea of projecting multivariate measurements to a 2D display, visualizing the time dimension by trajectories. We use visual data aggregation metaphors based on grouping of similar data elements to scale with multivariate time series. Aggregation procedures can either be based on statistical properties of the data or on data clustering routines. Appropriately defined user controls allow to navigate and explore the data and interactively steer the parameters of the data aggregation to enhance data analysis. We present an implementation of our approach and apply it on a comprehensive data set from the field of earth bservation, demonstrating the applicability and usefulness of our approach.

Environmental characteristics and gas composition of Lost Hammer, Canadian Arctic

We report the first microbiological characterization of a terrestrial methane seep in a cryo-environment in the form of an Arctic hypersaline (~24% salinity), subzero (-5 C), perennial spring, arising through thick permafrost in an area with an average annual air temperature of -15 C. Bacterial and archaeal 16S rRNA gene clone libraries indicated a relatively low diversity of phylotypes within the spring sediment (Shannon index values of 1.65 and 1.39, respectively). Bacterial phylotypes were related to microorganisms such as Loktanella, Gillisia, Halomonas and Marinobacter spp. previously recovered from cold, saline habitats. A proportion of the bacterial phylotypes were cultured, including Marinobacter and Halomonas, with all isolates capable of growth at the in situ temperature (-5 C). Archaeal phylotypes were related to signatures from hypersaline deep-sea methane-seep sediments and were dominated by the anaerobic methane group 1a (ANME-1a) clade of anaerobic methane oxidizing archaea. CARD-FISH analyses indicated that cells within the spring sediment consisted of ~84.0% bacterial and 3.8% archaeal cells with ANME-1 cells accounting for most of the archaeal cells. The major gas discharging from the spring was methane (~50%) with the low CH4/C2 + ratio and hydrogen and carbon isotope signatures consistent with a thermogenic origin of the methane. Overall, this hypersaline, subzero environment supports a viable microbial community capable of activity at in situ temperature and where methane may behave as an energy and carbon source for sustaining anaerobic oxidation of methane-based microbial metabolism. This site also provides a model of how a methane seep can form in a cryo-environment as well as a mechanism for the hypothesized Martian methane plumes.

Mineralogy and major-element chemistry of volcanic ash of ODP Site 131-808

Mineralogical and major-element compositions of 72 samples of volcanic ash, recovered from Site 808 at Nankai Trough during Leg 131, were analyzed in relation to the early diagenetic alteration. Alteration products are first observed at the following depths: smectite, 200 mbsf; clinoptilolite, 646 mbsf; and analcite, 810 mbsf. Glass decomposition dominates over authigenic mineral formation between 200 and 550 mbsf in the sediment column, whereas mineral formation becomes dominant below 550 mbsf. Based on the X-ray diffraction patterns, a broad and asymmetric peak of 15A suggests a presence of illite/smectite (I/S) mixed-layered minerals in a sample from 646 mbsf. I/S mixed-layered mineral formation, however, rarely occurs even at the bottom of the sediment column (1290 mbsf) at 120° C. This is possibly because zeolite (especially clinoptilolite) formed in the ash interferes with illite formation in the smectite. The formation of alteration minerals affects the major-element chemistry of the ash and the interstitial waters. H4SiO4 concentrations in interstitial waters increase during glass decomposition and decrease with smectite and clinoptilolite formation. K is removed from interstitial water into smectite and/or clinoptilolite. Mg is fixed into smectite (and/or chlorite).

Seawater carbonate chemistry, the abiotic conditions in the fluid surrounding the embryo, growth, calcification of the cuttlefish Sepia officinalis in a laboratory experiment

This study investigated the effects of seawater pH (i.e., 8.10, 7.85 and 7.60) and temperature (16 and 19 °C) on (a) the abiotic conditions in the fluid surrounding the embryo (viz. the perivitelline fluid), (b) growth, development and (c) cuttlebone calcification of embryonic and juvenile stages of the cephalopod Sepia officinalis. Egg swelling increased in response to acidification or warming, leading to an increase in egg surface while the interactive effects suggested a limited plasticity of the swelling modulation. Embryos experienced elevated pCO2 conditions in the perivitelline fluid (>3-fold higher pCO2 than that of ambient seawater), rendering the medium under-saturated even under ambient conditions. The growth of both embryos and juveniles was unaffected by pH, whereas 45Ca incorporation in cuttlebone increased significantly with decreasing pH at both temperatures. This phenomenon of hypercalcification is limited to only a number of animals but does not guarantee functional performance and calls for better mechanistic understanding of calcification processes.

Grain size and diatom valves in sediment cores KS82-30 and KS82-31

Diatoms were studied quantitatively in six latest Quaternary (~70 kyr B.P. to Recent) piston cores from the westernmost Mediterranean, the Alboran Basin, and the Atlantic region immediately to the west of the Straits of Gibraltar. The Atlantic cores completely lack diatoms. In the Alboran Basin, diatoms are common from late Stage 3 (~27.5 kyr B.P.) to Termination lb (9 kyr B.P.) and in Recent core tops, but are absent in the other latest Quaternary intervals. Maximum accumulation of diatoms and highest abundance of species normally in sediments associated with increased productivity occurred during the latest Quaternary deglaciation, in the first phase of Termination I (~14.8 kyr B.P.). In the modern Alboran Basin, a region of high biological productivity occurs immediately east of the Gibraltar Straits. This high productivity results from upwelling associated with the interaction between the Atlantic inflow and the bottom topography near the Spanish coast. The upwelled nutrient-rich waters are then advected to the east and southeast by the surficial anticyclonic gyral circulation. Late Quaternary variations in diatom abundance are considered to reflect changes in this upwelling intensity with highest diatom abundances inferred to result from increased upwelling associated with an intensification of the anticyclonic gyral circulation. Highest inferred upwelling rates occurred during the first phase of latest Quaternary deglaciation. It is possible that an intensification of circulation within the Mediterranean Basin as a whole occurred from late Stage 3 to mid Termination I because widespread hiatus formation has been reported at this time in the Straits of Sicily due to an increase in the formation of intermediate waters. Diatoms were not preserved in other latest Quaternary intervals due to insufficient productivity to counterbalance their dissolution.

(Table 2) 230Th, 230Th xs and 232Th concentrations in dissolved, particulate and total (dissolved+small particles) for all KEOPS stations, Marion Dufresne cruise MD145

In the context of the KErguelen Ocean and Plateau compared Study (KEOPS, 19 January-13 February 2005), particle dynamics were investigated using thorium isotope measurements over and off the Kerguelen plateau. Dissolved and particulate 230Th and 232Th samples were collected at nine stations. Dissolved excess 230Th concentrations (230Thxs) vary from 0.5 to 20.8 fg/kg and particulate 230Thxs concentrations from 0.1 to 10.0 fg/kg. Dissolved and particulate 232Th concentration ranges are 16.8-450.2 pg/kg and 3.8-502.8 pg/kg, respectively. The 230Thxs concentrations increase linearly with depth down to the bottom at most of the plateau stations and down to 1000 m at the off-plateau stations. This linear trend is observed down to the bottom (1550 m) at Kerfix, the open-ocean "upstream" station located west of the Kerguelen plateau. A simple reversible scavenging model applied to these data allowed the estimation of adsorption rate constant (k1~=0.2-0.8 per year), desorption rate constant (k-1~=1-8 per year) and partition coefficients (average K=0.16±0.07). Calculated particle settling velocities S deduced from this simple model are ca. 500 m/year at most of the plateau stations and 800 m/year at all the off-plateau stations. The plateau settling velocities are relatively low for such a productive site, compared to the surrounding HNLC areas. The difference might reflect the fact that lateral advection is neglected in this model. Taking this advection into account allows the reconstruction of the observed 230Thxs linear distributions, but only if faster settling velocities are considered. This implies that the 1D model strongly underestimates the settling velocity of the particles. In the deep layers, the occurrence of intense boundary scavenging along the escarpment due to bottom sediment re-suspension and interaction with a nepheloid layer, yielding a removal of ?50% of the Th stock along the northwestward transect, is suggested.

Geochemistry of vein rocks of ODP Hole 118-735B

Rock samples from Hole 735B, Southwest Indian Ridge, were examined to determine the principal vein-related types of alteration that occurred, the nature of fluids that were present, and the temperatures and pressures of these fluids. Samples studied included veined metagabbro, veined mylonitic metagabbro, felsic trondhjemite, and late-stage leucocratic diopside-bearing veins. The methods used were standard petrographic analysis, mineral chemical analysis by electron microprobe, fluid inclusion petrography and analysis by heating/freezing techniques and laser Raman microspectroscopy, and oxygen isotopic analyses of mineral separates. Alteration in lithologic Units I and II (above the level of Core 118-735B-3OR; approximately 140 meters below the seafloor) is dominated by hydration by seawater-derived fluids at high temperature, up to about 700°C, and low water/rock ratio, during and immediately after pervasive ductile deformation. Below Core 118-735B-30R, pervasive deformation is less common, and brittle veining and brecciation are the major alteration styles. Leucocratic centimeter-scale veins, often containing diopside and plagioclase, were produced by interaction of hot (about 500°C) seawater-derived fluid and gabbro. The water/rock ratio was locally high at the veins and breccia zones, but the integrated water/rock ratio for the lower part of the hole is probably low. Accessory hydrous magmatic or deuteric phases formed from magmatic volatiles in some gabbro and in trondhjemite. Most subsequent alteration was affected by fluids that were seawater-derived, based on isotopic and chemical analyses of minerals and analyses of fluid inclusions. Many early-generation fluid inclusions, associated with high-temperature veining, contain appreciable methane as well as saline water. The source of methane is unclear, but it may have formed as seawater was reduced during low water/rock interaction with ultramafic upper mantle or ultramafic and mafic layer 3. Temperatures of alteration were calculated on the basis of coexisting mineral chemistry and isotopic values. Hydrothermal metamorphism commenced at about 720°C and continued to about 550°C. Leucocratic veining took place at about 500°C. Alteration within brecciated horizons was also at about 500° to less than 400°C, and the trondhjemite was altered at about 550° to below 490°C. Pressures calculated from a diopside-bearing vein, based on a combination of fluid inclusion and isotopic analysis, were 90 to 100 MPa. This pressure places the sample, from Core 118-735B-70R in Unit V, at about 2 km below the seafloor.