In vitro and in vivo methodologies for studying the Sigma 54-dependent transcription.

Here we describe approaches and methods to assaying in vitro the major variant bacterial sigma factor, Sigma 54 (σ54), in a purified system. We include the complete transcription system, binding interactions between σ54 and its activators, as well as the self-assembly and the critical ATPase activity of the cognate activators which serve to remodel the closed promoter complexes. We also present in vivo methodologies that are used to study the impact of physiological processes, metabolic states, global signalling networks, and cellular architecture on the control of σ54-dependent gene expression.

A new look towards BAC-based array CGH through a comprehensive comparison with oligo-based array CGH

BACKGROUND: Currently, two main technologies are used for screening of DNA copy number; the BAC (Bacterial Artificial Chromosome) and the recently developed oligonucleotide-based CGH (Chromosomal Comparative Genomic Hybridization) arrays which are capable of detecting small genomic regions with amplification or deletion. The correlation as well as the discriminative power of these platforms has never been compared statistically on a significant set of human patient samples.

RESULTS: In this paper, we present an exhaustive comparison between the two CGH platforms, undertaken at two independent sites using the same batch of DNA from 19 advanced prostate cancers. The comparison was performed directly on the raw data and a significant correlation was found between the two platforms. The correlation was greatly improved when the data were averaged over large chromosomic regions using a segmentation algorithm. In addition, this analysis has enabled the development of a statistical model to discriminate BAC outliers that might indicate microevents. These microevents were validated by the oligo platform results.

CONCLUSION: This article presents a genome-wide statistical validation of the oligo array platform on a large set of patient samples and demonstrates statistically its superiority over the BAC platform for the Identification of chromosomic events. Taking advantage of a large set of human samples treated by the two technologies, a statistical model has been developed to show that the BAC platform could also detect microevents.

High-dose therapy and autologous stem cell transplantation in first relapse for diffuse large B cell lymphoma in the rituximab era:an analysis based on data from the European Blood and Marrow Transplantation Registry

Autologous stem cell transplantation (ASCT) consolidation remains the treatment of choice for patients with relapsed diffuse large B cell lymphoma. The impact of rituximab combined with chemotherapy in either first- or second-line therapy on the ultimate results of ASCT remains to be determined, however. This study was designed to evaluate the benefit of ASCT in patients achieving a second complete remission after salvage chemotherapy by retrospectively comparing the disease-free survival (DFS) after ASCT for each patient with the duration of the first complete remission (CR1). Between 1990 and 2005, a total of 470 patients who had undergone ASCT and reported to the European Blood and Bone Transplantation Registry with Medical Essential Data Form B information were evaluated. Of these 470 patients, 351 (74%) had not received rituximab before ASCT, and 119 (25%) had received rituximab before ASCT. The median duration of CR1 was 11 months. The median time from diagnosis to ASCT was 24 months. The BEAM protocol was the most frequently used conditioning regimen (67%). After ASCT, the 5-year overall survival was 63% (95% confidence interval, 58%-67%) and 5-year DFS was 48% (95% confidence interval, 43%-53%) for the entire patient population. Statistical analysis showed a significant increase in DFS after ASCT compared with duration of CR1 (median, 51 months versus 11 months; P < .001). This difference was also highly significant for patients with previous exposure to rituximab (median, 10 months versus not reached; P < .001) and for patients who had experienced relapse before 1 year (median, 6 months versus 47 months; P < .001). Our data indicate that ASCT can significantly increase DFS compared with the duration of CR1 in relapsed diffuse large B cell lymphoma and can alter the disease course even in patients with high-risk disease previously treated with rituximab.

Les techniques du dinandier: formes et fonction des outils lithiques spécifiques à la déformation plastique des métaux

In recent years, the proliferation of discoveries has enabled studies of stone tools used in metal working to develop. The increasing number of tools, made mostly from Neolithic polished axes, reveals a typological and functional diversity that remained largely unsuspected. This diversity is an opportunity to understand the tools and address the technical issues relating to the plastic deformation of metals. The operations that are represented here demonstrate the techniques used by coppersmiths with specialised tools.

Determinants of pediatric cataract program outcomes and follow-up in a large series in Mexico.

PURPOSE:

To report determinants of outcomes and follow-up in a large Mexican pediatric cataract project.

SETTING:

Hospital Luis Sanchez Bulnes, Mexico City, Mexico.

METHODS:

Data were collected prospectively from a pediatric cataract surgery program at the Hospital Luis Sanchez Bulnes, implemented by Helen Keller International. Preoperative data included age, sex, baseline visual acuity, type of cataract, laterality, and presence of conditions such as amblyopia. Surgical data included vitrectomy, capsulotomy, complications, and use of intraocular lenses (IOLs). Postoperative data included final visual acuity, refraction, number of follow-up visits, and program support for follow-up.

RESULTS:

Of 574 eyes of 415 children (mean age 7.1 years +/- 4.7 [SD]), IOLs were placed in 416 (87%). At least 1 follow-up was attended by 408 patients (98.3%) (mean total follow-up 3.5 +/- 1.8 months); 40% of eyes achieved a final visual acuity of 6/18 or better. Children living farther from the hospital had fewer postoperative visits (P = .04), while children receiving program support had more visits (P = .001). Factors predictive of better acuity included receiving an IOL during surgery (P = .04) and provision of postoperative spectacles (P = .001). Predictive of worse acuity were amblyopia (P = .003), postoperative complications (P = .0001), unilateral surgery (P = .0075), and female sex (P = .045).

CONCLUSIONS:

The results underscore the importance of surgical training in reducing complications, early intervention before amblyopia (observed in 40% of patients) can develop, and vigorous treatment if amblyopia is present. The positive impact of program support on follow-up is encouraging, although direct financial support may pose a problem for sustainability. More work is needed to understand reasons for worse outcomes in girls.

Creación de la Microempresa Procesadora de Flores inmortalizadas en la Parroquia el Quinche y su comercialización en la zona norte de Quito

El Ecuador es un país privilegiado que ocupa uno de los primeros lugares en el mundo por la calidad y la gran variedad de sus flores, la utilización de mano de obra calificada y la habilidad de manejar costos de producción más bajos que los de la competencia. La producción florícola en el Ecuador es la actividad exportable que mayor dinamismo y repunte ha alcanzado en los últimos 10 años, en virtud de los factores favorables ya mencionados que han permitido su desarrollo en un medio competitivo. Los empresarios deben reforzar sus factores para de esta forma enfrentar con éxito el creciente comercio internacional de estos productos. La situación actual, estructura e importancia de este sector dentro de la economía nacional, los mercados de destino y los potenciales para la comercialización contribuyen al mantenimiento y consolidación de la ventaja competitiva en la producción de flores.

ORBS and the limits of static slicing

Observation-based slicing is a recently-introduced, language-independent, slicing technique based on the dependencies observable from program behaviour. Due to the wellknown limits of dynamic analysis, we may only compute an under-approximation of the true observation-based slice. However, because the observation-based slice captures all possible dependence that can be observed, even such approximations can yield insight into the limitations of static slicing. For example, a static slice, S that is strictly smaller than the corresponding observation based slice is guaranteed to be unsafe. We present the results of three sets of experiments on 12 different programs, including benchmarks and larger programs, which investigate the relationship between static and observation-based slicing. We show that, in extreme cases, observation-based slices can find the true static minimal slice, where static techniques cannot. For more typical cases, our results illustrate the potential for observation-based slicing to highlight unsafe static slices. Finally, we report on the sensitivity of observation-based slicing to test quality.

Les effets du travail en équipe dans l'apprentissage par projets sur la motivation des étudiantes et des étudiants en formation des ingénieurs

Les représentants des secteurs industriels et les milieux professionnels en Amérique du Nord reprochaient aux universités de former des ingénieurs avec peu d'expérience pratique en résolution de problèmes et en conception. Quelques programmes de génie ont alors mis en place le travail en équipe dans l'apprentissage par projets. Beaucoup d'écrits font valoir les bénéfices de l'apprentissage par projets sur la motivation des étudiants. Or, ces bénéfices commencent à peine à faire l'objet de recherches visant à produire des données probantes à ce sujet.Les travaux sur la motivation en contexte d'apprentissage et les modèles théoriques développés sont issus d'environnements d'apprentissage marqués par l'enseignement magistral. Le modèle de la valeur attendue de la tâche (Eccles et Wigfield, 1995; Neuville, 2004) et le modèle du système-groupe (St-Arnaud, 2008) ont été retenus pour mesurer les effets du travail en équipe dans l'apprentissage par projets sur la motivation. La recherche visait aussi à approfondir et à nuancer la compréhension de la motivation des étudiants universitaires apprenant en contexte innovant.Les sujets constituent une cohorte (n=100) travaillant sur des projets d'intégration au cours des trois sessions initiales du programme de génie mécanique d'une université canadienne. L'analyse de régression multiple révèle que les construits de la motivation expliquent un tiers de la variance de l'engagement académique dans la réalisation du projet d'intégration.Les perceptions de l'"expectancy", de la valeur intrinsèque et utilitaire sont les déterminants principaux de l'engagement des étudiants. L'analyse de variance multivariée à mesures répétées indique que la motivation des étudiants pour le travail sur les projets d'intégration a augmenté au cours des trois sessions initiales du parcours de formation. Finalement, malgré l'absence d'interaction significative entre les variables de motivation et de l'équipe, les réponses des sujets indiquent une amélioration du travail en équipe au terme des trois sessions.

Inovação tecnológica nas PME e dinâmica regional em Portugal

Tese de dout., Economia (Economia da Informação), Faculdade de Economia, Univ. do Algarve, 2004

A tradução da Peregrinaçam de Fernão Mendes Pinto em Espanha, França, Inglaterra e Alemanha no século XVII

Este trabalho de investigação comparativista insere-se no âmbito das relações entretecidas pelos Estudos de Tradução e a Literatura Comparada, nomeadamente no que respeita ao conceito de tradução literária na Europa Ocidental do século XVII. Trata-se de um estudo intercultural, atendendo a que a tradução promove a mudança cultural decorrente de um processo de transferência intercultural com implicações literárias e ideológicas. Os textos que constituíram o nosso objeto de trabalho são a Peregrinaçam de Fernão Mendes Pinto (1614) e as primeiras traduções completas ou parciais para espanhol (1620), da autoria de Francisco de Herrera Maldonado, para francês (1628), de Bernard Figuier, para inglês (1653), de Henry Cogan, e para alemão (1671), dos editores Henrich e Dietrich Boom. No decorrer da análise comparativa, procurámos demonstrar o grau de (in)fidelidade de cada tradução, estabelecendo paralelismos e realçando os procedimentos tradutológicos adotados em cada versão, os quais revelam, claramente, contactos entre si e/ou condicionalismos culturais e ideológicos implícitos. Estudámos o modo como cada tradução adaptou a obra original ao gosto e aos códigos linguísticos e literários do seu público-alvo. No desenvolvimento do nosso trabalho, tivemos em mente os códigos tradutológicos do século XVII em Espanha, França, Inglaterra e Alemanha, em virtude de o nosso corpus ser constituído por textos publicados no decorrer desse período. Como metodologia de trabalho, delimitámos cinco momentos narrativos, no interior dos quais foram encontradas e analisadas comparativamente passagens consideradas exemplificativas das principais técnicas tradutivas características de cada texto e das inter-relações estabelecidas entre eles. Por fim, um outro objetivo nosso consistiu na avaliação do significado e da relevância da receção da tradução- -adaptação desta obra portuguesa naqueles contextos de chegada (no momento imediato e para além dele).

L’harmonie vocalique turque : entre théories et pratique

Dans ce travail, je propose que l’harmonie vocalique turque n’est plus un phénomène phonologique synchroniquement productif en cette langue. Ce qui est jugé harmonique n’est en fait que les traces d’un système harmonique ancien, traces qui se sont morphologisées. La démonstration est faite 1) en critiquant la littérature existante et en montrant les paradoxes auxquels elle mène et 2) en regardant du côté des travaux sur l’acquisition du langage, la perception du langage et le transfert linguistique. Il est montré que la seule raison de postuler l’harmonie vocalique turque tient à nos présupposés sur ce qu’est la morphologie d’une langue. Certains modèles phonologiques ne prenant pas en compte ces présupposés sont ensuite étudiés. Une formalisation utilisant le modèle morphologique Whole Word Morphology est finalement proposée.

Development of a new cellular model for the visualization and study of GFAP oligomerization in living cells

Tese de mestrado, Neurociências, Faculdade de Medicina, Universidade de Lisboa, 2016

Remote experimentation network - yielding an inter-university peer-to-peer e-service

The goal of this paper is to discuss the benefits and challenges of yielding an inter-continental network of remote laboratories supported and used by both European and Latin American Institutions of Higher Education. Since remote experimentation, understood as the ability to carry out real-world experiments through a simple Web browser, is already a proven solution for the educational community as a supplement to on-site practical lab work (and in some cases, namely for distance learning courses, a replacement to that work), the purpose is not to discuss its technical, pedagogical, or economical strengths, but rather to raise and try to answer some questions about the underlying benefits and challenges of establishing a peer-to-peer network of remote labs. Ultimately, we regard such a network as a constructive mechanism to help students gain the working and social skills often valued by multinational/global companies, while also providing awareness of local cultural aspects.

How to increase brand value expanding the category and brand presence to the main meal occasion for Sumol- Compal

Having registered negative retail value growth of 4% in Portugal in 2014, the juice category is set to decline further by 5,5% until 2019. Manufacturers of juices and nectars are therefore increasingly looking for new categories in order to balance this negative forecast in their home territory. One apparent growth opportunity for Compal, the leading producer of juices and nectars, is to expand its commercial reach to new occasions of consumption. This report carefully analyzes the opportunities related to an expansion to the main meal occasion and introduces a complete marketing and communications plan for a possible new main meal juice, Compal à Mesa. The product concept represents a rather premium positioning for the main meal occasion, including new flavor mixes that are targeted at different occasions of meals. The justification of the introduced concept includes a discussion of the primary and secondary research that was performed

Mdx myotubes have normal excitability but show reduced contraction-relaxation dynamics.

The pathogenesis of Duchenne muscular dystrophy (DMD), characterised by lack of the cytoskeletal protein dystrophin, is not completely understood. An early event in the degenerative process of DMD muscle could be a rise in cytosolic calcium concentration. In order to investigate whether this leads to alterations of contractile behaviour, we studied the excitability and contractile properties of cultured myotubes from control (C57BL/10) and mdx mice, an animal model for DMD. The myotubes were stimulated electrically and their motion was recorded photometrically. No significant differences were found between control and mdx myotubes with respect to the following parameters: chronaxy and rheobase (0.33 +/- 0.03 ms and 23 +/- 4 V vs. 0.39 +/- 0.07 ms and 22 +/- 2 V for C57 and mdx myotubes, respectively), tetanisation frequency (a similar distribution pattern was found between 5 and 30 Hz), fatigue during tetanus (found in 35% of both types of myotubes) and post-tetanic contracture. In contrast, contraction and relaxation times were longer (P < 0.005) in mdx (36 +/- 2 and 142 +/- 13 ms, respectively) than in control myotubes (26 +/- 1 and 85 +/- 9 ms, respectively). Together with our earlier findings, these results suggest a decreased capacity for calcium removal in mdx cells leading, in particular, to alterations of muscle relaxation.