Synthesis and Supramolecular Architectures of Lipophilic Derivatives of Guanine

Self-assembly relies on the association of pre-programmed building blocks through non-covalent interactions to give complex supramolecular architectures. Previous studies provided evidence for the unique self-assembly properties of semi-synthetic lipophilic guanosine derivatives which can sequestrate ions from an aqueous phase, carry them into an organic phase where they promote the generation of well-defined supramolecular assemblies. In the presence of cations lipophilic guanosines form columnar aggregates while in their absence they generate supramolecular ribbons. The aim of this thesis has been the synthesis of guanine derivatives, in particular N9-alkylated guanines and a guanosine functionalized as a perchlorotriphenylmetil moiety (Gace-a-HPTM) in order to observe their supramolecular behaviour in the absence of sugar (ribose or deoxyribose) and in the presence of a bulky and chiral substituent respectively. By using guanine instead of guanosine, while maintaining all the hydrogen bond acceptor and donor groups required for supramolecular aggregation, the steric hindrance to supramolecular aggregation is notably reduced because (i.e. guanines with groups in N9 different from sugar are expected to have a greatest conformational freedom even in presence of bulky groups in C8). Supramolecular self-assembly of these derivatives has been accomplished in solutions by NMR and CD spectroscopy and on surface by STM technique. In analogy with other guanosine derivatives, also N9-substituted guanines and GAceHPTM form either ribbon-like aggregates or cation-templated G-quartet based columnar structures.

Preparation of new crystal forms via photochemical, mechanochemical and sol-gel methods

This work of thesis involves various aspects of crystal engineering. Chapter 1 focuses on crystals containing crown ether complexes. Aspects such as the possibility of preparing these materials by non-solution methods, i.e. by direct reaction of the solid components, thermal behavior and also isomorphism and interconversion between hydrates are taken into account. In chapter 2 a study is presented aimed to understanding the relationship between hydrogen bonding capability and shape of the building blocks chosen to construct crystals. The focus is on the control exerted by shape on the organization of sandwich cations such as cobalticinium, decamethylcobalticinium and bisbenzenchromium(I) and on the aggregation of monoanions all containing carboxylic and carboxylate groups, into 0-D, 1-D, 2-D and 3-D networks. Reactions conducted in multi-component molecular assemblies or co-crystals have been recognized as a way to control reactivity in the solid state. The [2+2] photodimerization of olefins is a successful demonstration of how templated solid state synthesis can efficiently synthesize unique materials with remarkable stereoselectivity and under environment-friendly conditions. A demonstration of this synthetic strategy is given in chapter 3. The combination of various types of intermolecular linkages, leading to formation of high order aggregation and crystalline materials or to a random aggregation resulting in an amorphous precipitate, may not go to completeness. In such rare cases an aggregation process intermediate between crystalline and amorphous materials is observed, resulting in the formation of a gel, i.e. a viscoelastic solid-like or liquid-like material. In chapter 4 design of new Low Molecular Weight Gelators is presented. Aspects such as the relationships between molecular structure, crystal packing and gelation properties and the application of this kind of gels as a medium for crystal growth of organic molecules, such as APIs, are also discussed.

Statistische Betrachtungen und mößbauerspektroskopische Untersuchungen von Ordnungszuständen in Biotiten

Im Mittelpunkt der vorliegenden Arbeit standen Untersuchungen zu strukturellen Ordnungs- und Unordnungsphänomenen an natürlichen, substitutionellen Mischkristallen. Aufgrund der enormen Vielfalt an potentiellen Austauschpartnern wurden hierfür Vertreter der Biotit-Mischkristallreihe "Phlogopit-Annit" ausgewählt. Ihr modulartiger Aufbau ermöglichte die gezielte Beschreibung von Verteilungsmustern anionischer und kationischer Merkmalsträger innerhalb der Oktaederschicht der Biotit-Mischkristalle. Basierend auf der postulierten Bindungsaffinität zwischen Mg2+ und F- einerseits und Fe2+ und OH- andererseits, wurde die strukturelle Separation einer Fluor-Phlogopit-Komponente als primäre Ausprägungsform des Mg/F-Ordnungsprinzips abgeleitet. Im Rahmen dieser Modellvorstellung koexistieren im makroskopisch homogenen Biotit-Mischkristall Domänen zweier chemisch divergenter Phasen nebeneinander: Eine rein Mg2+/F- - führende Phlogopit-Phase und eine Wirtskristallphase, die mit fortschreitender Separation bzw. Entmischung der erstgenannten Phase sukzessive reicher an einer hydroxylführenden eisenreichen Annit-Komponente wird. Zwecks numerischer Beschreibung diverser Stadien der Entmischungsreaktion wurden die Begriffe der "Relativen" und "Absoluten Domänengröße" eingeführt. Sie stellen ein quantitatives Maß zur Beurteilung der diskutierten Ordnungsphänomene dar. Basierend auf einem sich stetig ändernden Chemismus der Wirtskristallphase kann jeder Übergangszustand zwischen statistischer Verteilung und vollständiger Ordnung durch das korrespondierende Verteilungsmuster der interessierenden Merkmalsträger ( = Nahordnungskonfiguration und Besetzungswahrscheinlichkeit) charakterisiert und beschrieben werden. Durch mößbauerspektroskopische Untersuchungen konnten die anhand der entwickelten Modelle vorhergesagten Ausprägungsformen von Ordnungs-/Unordnungsphänomenen qualitativ und quantitativ verifiziert werden. Es liessen sich hierbei zwei Gruppen von Biotit-Mischkristallen unterscheiden. Eine erste Gruppe, deren Mößbauer-Spektren durch den OH/F-Chemismus als dominierendes Differenzierungsmerkmal geprägt wird, und eine zweite Gruppe, deren Mößbauer-Spektren durch Gruppierungen von höherwertigen Kationen und Vakanzen ( = Defektchemie) geprägt wird. Auf der Basis von Korrelationsdiagrammen, die einen numerischen und graphischen Bezug zwischen absoluter und relativer Domänengröße einerseits und experimentell zugänglichem Mößbauer-Parameter A (= relativer Flächenanteil, korrespondierend mit der Besetzungswahrscheinlichkeit einer bestimmten Nahordnungs-konstellation) andererseits herstellen, konnten für die erste Gruppe die Volumina der beiden miteinander koexistierenden Komponenten "Hydroxyl-Annit reicher Wirtskristall" und "Fluor-Phlogopit" exakt quantifiziert werden. Das Spektrum der untersuchten Proben umfasste hierbei Kristallspezies, die einerseits durch geringe bis mittlere Mg2+/F- - bzw. Fe2+/OH- -Ordnungsgrade gekennzeichnet sind, andererseits eine nahezu vollständige Ordnung der interessierenden Merkmalsträger Mg2+, Fe2+, OH- und F- widerspiegeln. Desweiteren konnte der Nachweis geführt werden, dass für ausgewählte Proben eine quantitative Bestimmung der Defektvolumina möglich ist.

Sulfur isotope analysis of aerosol particles by NanoSIMS

A new method to measure the sulfur isotopic composition of individual aerosol particles by NanoSIMS has been developed and tested on several standards such as barite (BaSO4), anhydrite (CaSO4), gypsum (CaSO4·2H2O), mascagnite ((NH4)2SO4), epsomite (MgSO4·7H2O), magnesium sulfate (MgSO4·xH2O), thenardite (Na2SO4), boetite (K2SO4) and cysteine (an amino acid). This ion microprobe technique employs a Cs+ primary ion beam and measures negative secondary ions permitting the analysis of sulfur isotope ratios in individual aerosol particles down to 500 nm in size (0.001-0.5 ng of sample material). The grain-to-grain reproducibility of measurements is typically 5‰ (1σ) for micron-sized grains, <5‰ for submicron-sized grains, and <2‰ for polished thin sections and ultra microtome sections which were studied for comparison. The role of chemical omposition (matrix effect) and sample preparation techniques on the instrumental mass fractionation (IMF) of the 34S/32S ratio in the NanoSIMS has been investigated. The IMF varies by ~15‰ between the standards studied here. A good correlation between IMF and ionic radius of the cations in sulfates was observed. This permits to infer IMF corrections even for sulfates for which no isotope standards are available. The new technique allows to identify different types of primary and secondary sulfates based on their chemical composition and to measure their isotopic signature separately. It was applied to marine aerosol samples collected in Mace Head and urban aerosol samples collected in Mainz. It was shown that primary sulfate particles such as sulfate in NaCl or gypsum particles precipitated from ocean water retain the original isotopic signature of their source. The isotopic composition of secondary sulfate depends on the isotopic composition of precursor SO2 and the oxidation pathway. The 34S/32S fractionation with respect to the precursor SO2 is -9‰ for homogeneous oxidation and +16.5‰ for heterogeneous oxidation. This large difference between the isotopic fractionation of both pathways allows identifying the oxidation pathway from which the SO42- in a secondary sulfate particle is derived, by means of its sulfur isotope ratio, provided that the isotopic signature of the precursor SO2 is known. The isotopic composition of the precursor SO2 of secondary sulfates was calculated based on the isotopic composition of particles with known oxidation pathway such as fine mode ammonium sulfate.