964 resultados para Cholera toxin subunit B
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The predictions of the SU(3) flavor symmetry of the strong interactions for the weak decay of charmed baryons and B-mesons are detailed. It is hoped that comparison between these predictions and experiment will shed some light on the underlying dynamics involved in these weak decays. Although only a few decay modes of the charmed baryons and B-mesons have been studied experimentally it is hoped that the next generation of B-factories and even Z-decays at LEP will provide enough events to test these predictions.
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In the cell, the binding of proteins to specific sequences of double helical DNA is essential for controlling the processes of protein synthesis (at the level of DNA transcription) and cell proliferation (at the level of DNA replication). In the laboratory, the sequence-specific DNA binding/cleaving properties of restriction endonuclease enzymes (secreted by microorganisms to protect them from foreign DNA molecules) have helped to fuel a revolution in molecular biology. The strength and specificity of a protein:DNA interaction depend upon structural features inherent to the protein and DNA sequences, but it is now appreciated that these features (and therefore protein:DNA complexation) may be altered (regulated) by other protein:DNA complexes, or by environmental factors such as temperature or the presence of specific organic molecules or inorganic ions. It is also now appreciated that molecules much smaller than proteins (including antibiotics of molecular weight less than 2000 and oligonucleotides) can bind to double-helical DNA in sequence-specific fashion. Elucidation of structural motifs and microscopic interactions responsible for the specific molecular recognition of DNA leads to greater understanding of natural processes and provides a basis for the design of novel sequence-specific DNA binding molecules. This thesis describes the synthesis and DNA binding/cleaving characteristics of molecules designed to probe structural, stereochemical, and environmental factors that regulate sequence-specific DNA recognition.
Chapter One introduces the DNA minor groove binding antibiotics Netropsin and
Distamycin A, which are di- and tri(N-methylpyrrolecarboxamide) peptides, respectively.
The method of DNA affinity cleaving, which has been employed to determine DNA
binding properties of designed synthetic molecules is described. The design and synthesis
of a series of Netropsin dimers linked in tail-to-tail fashion (by oxalic, malonic, succinic, or
fumaric acid), or in head-to-tail fashion (by glycine, β-alanine, and γ-aminobutanoic acid
(Gaba)) are presented. These Bis(Netropsin)s were appended with the iron-chelating
functionality EDTA in order to make use of the technique of DNA affinity cleaving.
Bis(Netropsin)-EDTA compounds are analogs of penta(N-methylpyrrolecarboxamide)-EDTA
(P5E), which may be considered a head-to-tail Netropsin dimer linked by Nmethylpyrrolecarboxamide.
Low- and high-resolution analysis of pBR322 DNA affinity
cleaving by the iron complexes of these molecules indicated that small changes in the length
and nature of the linker had significant effects on DNA binding/cleaving efficiency (a
measure of DNA binding affinity). DNA binding/cleaving efficiency was found to
decrease with changes in the linker in the order β-alanine > succinamide > fumaramide >
N-methylpyrrolecarboxamide > malonamide >glycine, γ-aminobutanamide > oxalamide.
In general, the Bis(Netropsin)-EDTA:Fe compounds retained the specificity for seven
contiguous A:T base pairs characteristic of P5E:Fe binding. However, Bis(Netropsin)Oxalamide-
EDTA:Fe exhibited decreased specificity for A:T base pairs, and
Bis(Netropsin)-Gaba-EDT A:Fe exhibited some DNA binding sites of less than seven base
pairs. Bis(Netropsin)s linked with diacids have C
Chapter Two describes the design, synthesis, and DNA binding properties of a series of chiral molecules: Bis(Netropsin)-EDTA compounds with linkers derived from (R,R)-, (S,S)-, and (RS,SR)-tartaric acids, (R,R)-, (S,S)-, and (RS,SR)-tartaric acid acetonides, (R)- and (S)-malic acids, N ,N-dimethylaminoaspartic acid, and (R)- and (S)-alanine, as well as three constitutional isomers in which an N-methylpyrrolecarboxamide (P1) subunit and a tri(N-methylpyrrolecarboxamide)-EDTA (P3-EDTA) subunit were linked by succinic acid, (R ,R)-, and (S ,S)-tartaric acids. DNA binding/cleaving efficiencies among this series of molecules and the Bis(Netropsin)s described in Chapter One were found to decrease with changes in the linker in the order β-alanine > succinamide > P1-succinamide-P3 > fumaramide > (S)-malicamide > N-methylpyrrolecarboxamide > (R)-malicamide > malonamide > N ,N-dimethylaminoaspanamide > glycine = Gaba = (S,S)-tartaramide = P1-(S,S)-tanaramide-P3 > oxalamide > (RS,SR)-tartaramide = P1- (R,R)-tanaramide-P3 > (R,R)-tartaramide (no sequence-specific DNA binding was detected for Bis(Netropsin)s linked by (R)- or (S)-alanine or by tartaric acid acetonides). The chiral molecules retained DNA binding specificity for seven contiguous A:T base pairs. From the DNA affinity cleaving data it could be determined that: 1) Addition of one or two substituents to the linker of Bis(Netropsin)-Succinamide resulted in stepwise decreases in DNA binding affinity; 2) molecules with single hydroxyl substituents bound DNA more strongly than molecules with single dimethylamino substituents; 3) hydroxyl-substituted molecules of (S) configuration bound more strongly to DNA than molecules of (R) configuration. This stereochemical regulation of DNA binding is proposed to arise from the inherent right-handed twist of (S)-enantiomeric Bis(Netropsin)s versus the inherent lefthanded twist of (R)-enantiomeric Bis(Netropsin)s, which makes the (S)-enantiomers more complementary to the right-handed twist of B form DNA.
Chapter Three describes the design and synthesis of molecules for the study of
metalloregulated DNA binding phenomena. Among a series of Bis(Netropsin)-EDTA
compounds linked by homologous tethers bearing four, five, or six oxygen atoms, the
Bis(Netropsin) linked by a pentaether tether exhibited strongly enhanced DNA
binding/cleaving in the presence of strontium or barium cations. The observed
metallospecificity was consistent with the known affinities of metal cations for the cyclic
hexaether 18-crown-6 in water. High-resolution DNA affinity cleaving analysis indicated
that DNA binding by this molecule in the presence of strontium or barium was not only
stronger but of different sequence-specificity than the (weak) binding observed in the
absence of metal cations. The metalloregulated binding sites were consistent with A:T
binding by the Netropsin subunits and G:C binding by a strontium or barium:pentaether
complex. A model for the observed positive metalloregulation and novel sequence-specificity
is presented. The effects of 44 different cations on DNA affinity cleaving by
P5E:Fe were examined. A series of Bis(Netropsin)-EDTA compounds linked by tethers
bearing two, three, four, or five amino groups was also synthesized. These molecules
exhibited strong and specific binding to A:T rich regions of DNA. It was found that the
iron complexes of these molecules bound and cleaved DNA most efficiently at pH 6.0-6.5,
while P5E:Fe bound and cleaved most efficiently at pH 7.5-8.0. Incubating the
Bis(Netropsin) Polyamine-EDTA:Fe molecules with K
Chapter Four describes the discovery and characterization of a new DNA binding/cleaving agent, [SalenMn(III)]OAc. This metal complex produces single- and double-strand cleavage of DNA, with specificity for A:T rich regions, in the presence of oxygen atom donors such as iodosyl benzene, hydrogen peroxide, or peracids. Maximal cleavage by [SalenMn(III)]OAc was produced at pH 6-7. A comparison of DNA singleand double-strand cleavage by [SalenMn(III)]+ and other small molecules (Methidiumpropyl-EDTA:Fe, Distamycin-EDTA:Fe, Neocarzinostatin, Bleomycin:Fe) is presented. It was found that DNA cleavage by [SalenMn(III)]+ did not require the presence of dioxygen, and that base treatment of DNA subsequent to cleavage by [SalenMn(III)]+ afforded greater cleavage and alterations in the cleavage patterns. Analysis of DNA products formed upon DNA cleavage by [SalenMn(III)] indicated that cleavage was due to oxidation of the sugar-phosphate backbone of DNA. Several mechanisms consistent with the observed products and reaction requirements are discussed.
Chapter Five describes progress on some additional studies. In one study, the DNA binding/cleaving specificities of Distamycin-EDTA derivatives bearing pyrrole N-isopropyl substituents were found to be the same as those of derivatives bearing pyrrole N-methyl substituents. In a second study, the design of and synthetic progress towards a series of nucleopeptide activators of transcription are presented. Five synthetic plasmids designed to test for activation of in vitro run-off transcription by DNA triple helix-forming oligonucleotides or nucleopeptides are described.
Chapter Six contains the experimental documentation of the thesis work.
MicroRNA-132 is a physiological regulator of hematopoietic stem cell function and B-cell development
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MicroRNAs are a class of small non-coding RNAs that negatively regulate gene expression. Several microRNAs have been implicated in altering hematopoietic cell fate decisions. Importantly, deregulation of many microRNAs can lead to deleterious consequences in the hematopoietic system, including the onset of cancer, autoimmunity, or a failure to respond effectively to infection. As such, microRNAs fine-tune the balance between normal hematopoietic output and pathologic consequences. In this work, we explore the role of two microRNAs, miR-132 and miR-125b, in regulating hematopoietic stem cell (HSC) function and B cell development. In particular, we uncover the role of miR-132 in maintaining the appropriate balance between self-renewal, differentiation, and survival in aging HSCs by buffering the expression of a critical transcription factor, FOXO3. By maintain this balance, miR-132 may play a critical role in preventing aging-associated hematopoietic conditions such as autoimmune disease and cancer. We also find that miR-132 plays a critical role in B cell development by targeting a key transcription factor, Sox4, that is responsible for the differentiation of pro-B cells into pre-B cells. We find that miR-132 regulates B cell apoptosis, and by delivering miR-132 to mice that are predisposed to developing B cell cancers, we can inhibit the formation of these cancers and improve the survival of these mice. In addition to miR-132, we uncovered the role of another critical microRNA, miR-125b, that potentiates hematopoietic stem cell function. We found that enforced expression of miR-125b causes an aggressive myeloid leukemia by downregulation of its target Lin28a. Importantly, miR-125b also plays a critical role in inhibiting the formation of pro-B cells. Thus, we have discovered two microRNAs with important roles in regulating normal hematopoiesis, and whose dregulation can lead to deleterious consequences such as cancer in the aging hematopoietic system. Both miR-132 and miR-125b may therefore be targeted for therapeutics to inhibit age-related immune diseases associated with the loss of HSC function and cancer progression.
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Experimental research was conducted to study the development of eggs of Eudiaptomus gracilis Sars. The egg production was studied as well as the population dynamics. Factors like losses in the lake and through the effluent Rhine at Konstanz were considered.
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In recent years interest in the production and description of kinin-type substances has been greatly intensified. So, for example, bradykinin, phyllokinin, physalaemin, ranatensin and caerulein could be extracted from the skin of amphibians as well as. eledoisin out of the salivary glands of Eledon moschata. An examination of lampreys seemed to us particularly profitable in the search for the incidence of further kinins. Ammocoetes of different sizes and also adults of both sexes of the species Eudontomyzon danfordi vladykovi were studied in this research. This species is found in many tributaries of the Danube. Skin extracts were tested on on isolated rat uterus, rat duodenum, guinea pig ileum and rabbit jejunum, further tests were done in order to determine a peptide character of the biologically active substance.
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Tryptophan and unnatural tryptophan derivatives are important building blocks for the total synthesis of natural products, as well as the development of new drugs, biological probes, and chiral small molecule catalysts. This thesis describes various catalytic methods for the preparation of tryptophan derivatives as well as their functionalization and use in natural product total synthesis.
Herein, the tandem Friedel–Crafts conjugate addition/asymmetric protonation reaction between 2-substituted indoles and methyl 2-acetamidoacrylate to provide enantioenriched trytophans is reported. This method inspired further work in the area of transition metal catalyzed arylation reactions. We report the development of the coppercatalyzed arylation of tryptamine and tryptophan derivatives. The utility of these transformations is highlighted in the five-step syntheses of the natural products (+)-naseseazine A and B. Further work on the development of a mild and general Larock indolization protocol to access unnatural tryptophans is also discussed.
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Diketopiperazine (DKP) motif is found in a wide range of biologically active natural products. This work details our efforts toward two classes of DKP-containing natural products.
Class one features the pyrroloindoline structure, derived from tryptophans. Our group developed a highly enantioselective (3 + 2) formal cycloaddition between indoles and acrylates to provide pyrroloindoline products possessing three stereocenters. Utilizing this methodology, we accomplished asymmetric total synthesis of three natural products: (–)-lansai B, (+)-nocardioazines A and B. Total synthesis of (–)-lansai B was realized in six steps, and featured an amino acid dimerization strategy. The total synthesis of (+)-nocardioazine B was also successfully completed in ten steps. Challenges were met in approaching (+)-nocardioazine A, where a seemingly easy last-step epoxidization did not prove successful. After re-examining our synthetic strategy, an early-stage epoxidation strategy was pursued, which eventually yielded a nine-step total synthesis of (+)-nocardioazine A.
Class two is the epidithiodiketopiperazine (ETP) natural products, which possesses an additional episulfide bridge in the DKP core. With the goal of accessing ETPs with different peripheral structures for structure-activity relationship studies, a highly divergent route was successfully developed, which was showcased in the formal synthesis of (–)-emethallicin E and (–)-haematocin, and the first asymmetric synthesis of (–)-acetylapoaranotin.
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En este TFG trato de ver la viabilidad económico-financiera de un proyecto empresarial de nueva empresa basado en la innovación, las tendencias actuales de compra y la tecnología. Tras el análisis de la evolución de los supermercados y la apuesta por la tecnología, de estos, en otros países, he tratado de buscar la forma de adaptarla a nuestra sociedad, cultura y costumbres. Scanner Market es un nuevo modelo de supermercado supeditado a un gran almacén de distribución, en este caso El Corte Inglés, pero puede ser aplicado para otros muchos. Basa su comercialización en una tienda física en la que existe una gran variedad de productos en un espacio reducido. Se consigue comercializar tal variedad de productos gracias a la exposición de uno solo, de forma que actúe como “muestra” para los clientes. En la tienda no hay almacén, sino que se trata de optimizar el espacio para dar cabida a una amplia oferta de productos (en forma de muestras). Los clientes hacen la compra físicamente escaneando el producto a través de una app. para Smartphone o unas pistolas de compra con el mismo software y el pedido es enviado a su hogar por la distribución de El corte Inglés.
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The lowest T = 2 states have been identified and studied in the nuclei 12C, 12B, 20F and and 28Al. The first two of these were produced in the reactions 14C(p,t)12C and 14C (p,3He)12B, at 50.5 and 63.4 MeV incident proton energy respectively, at the Oak Ridge National Laboratory. The T = 2 states in 20F and 28Al were observed in (3He,p) reactions at 12-MeV incident energy, with the Caltech Tandem accelerator.
The results for the four nuclei studied are summarized below:
(1) 12C: the lowest T = 2 state was located at an excitation energy of 27595 ± 20 keV, and has a width less than 35 keV.
(2) 12B: the lowest T = 2 state was found at an excitation energy of 12710 ± 20 keV. The width was determined to be less than 54 keV and the spin and parity were confirmed to be 0+. A second 12B state (or doublet) was observed at an excitation energy of 14860 ± 30 keV with a width (if the group corresponds to a single state) of 226 ± 30 keV.
(3) 20F: the lowest T = 2 state was observed at an excitation of 6513 ± 5 keV; the spin and parity were confirmed to be 0+. A second state, tentatively identified as T = 2 from the level spacing, was located at 8210 ± 6 keV.
(4) 28Al: the lowest T = 2 state was identified at an excitation of 5997 ± 6 keV; the spin and parity were confirmed to be 0+. A second state at an excitation energy of 7491 ± 11 keV is tentatively identified as T = 2, with a corresponding (tentative) spin and parity assignment Jπ = 2+.
The results of the present work and the other known masses of T = 2 states and nuclei for 8 ≤ A ≤ 28 are summarized, and massequation coefficients have been extracted for these multiplets. These coefficients were compared with those from T = 1 multiplets, and then used to predict the mass and stability of each of the unobserved members of the T = 2 multiplets.
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A produção de porfirinas por Corynebacterium diphtheriae é um objeto de estudo antigo, porém pouco explorado em Química e Ciências Médicas. O presente trabalho teve como objetivos comparar a influência de diferentes meios de cultura na produção de porfirinas por Corynebacterium diphtheriae, determinar a influencia da concentração do ferro na produção de porfirina, comparar quantitativamente a produção de porfirinas por diferentes amostras de bacilo diftérico e caracterizar químicamente os tipos de porfirinas produzidas. As técnicas utilizadas para isso foram a espectroscopia de absorção UV-visível e de fluorescência. O meio de cultura descrito por Mueller (1939), para a produção de toxina, se mostrou mais eficiente que o meio B de king, utilizado no diagnóstico laboratorial da difteria. A concentração de ferro no cultivo de Corynebacterium diphtheriae influencia a produção de porfirina. Altas concentrações de ferro inibem a produção de porfirina. A concentração de ferro onde a produção de porfirinas é máxima é de 0,20g/mL. Dentre as 11 amostras de bacilo diftérico estudadas, a amostra HC03, fermentadora de sacarose e toxinogênica, isolada de um caso de endocardite, foi a maior produtora de porfirina. A amostra ATCC de Corynebacterium ulcerans, não fermentadora de sacarose e toxinogênica, foi a amostra que produziu menos porfirina. Todas as 11 amostras apresentaram o mesmo perfil de espectro de fluorescência, sugerindo que a porfirina produzida seja a mesma nas amostras pesquisadas. As análises feitas para a caracterização do tipo de porfirina produzida levam a crer que esta seja uma coproporfirina. Os espectros de absorção e fluorescência não permitem porém determinar o(s) isômero(s) presente(s).
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As hepatites crônicas por vírus são as mais frequentes, destacando-se os vírus das hepatites B (VHB) e C (VHC). O estudo anatomopatológico da biópsia hepática é considerado o padrão ouro para avaliar com precisão a distorção arquitetural e o grau de fibrose do parênquima do fígado, importantes fatores prognósticos para os pacientes portadores de hepatites crônicas virais. Na avaliação histopatológica atual, em adição aos relatos subjetivos das alterações histológicas, escores semiquantitativos que correlacionam achados morfológicos com graus numéricos são usados, tais como os reconhecidos escores de Ishak e METAVIR. Entretanto, em todos estes sistemas há a desvantagem da subjetividade do examinador e da incorporação de alterações categóricas, sem referências às mudanças quantitativas do colágeno hepático. Técnicas de análise de imagens digitais (AID) que fornecem quantificação objetiva dos graus de fibrose em amostras histológicas têm sido desenvolvidas. Todavia, o alto custo e dificuldade ao acesso das tecnologias descritas restringem seu uso a poucos centros especializados. Este estudo visa o desenvolvimento de uma técnica de custo acessível para a análise de imagens digitais da fibrose hepática em hepatites crônicas virais. Foram estudadas 304 biópsias de pacientes com hepatite crônica por vírus B e C, obtidas através de agulhas Menghini. Todas as amostras tinham pelo menos 15 mm de comprimento ou cinco espaços-porta completos e foram coradas pelo método Tricrômico de Masson. O estadiamento foi feito por um único hepatopatologista experiente, sem o conhecimento dos dados clínicos dos pacientes. Os escores de Ishak e METAVIR foram aplicados. As imagens microscópicas foram digitalizadas. Os índices de fibrose foram determinados de forma automatizada, em técnica desenvolvida no programa Adobe Photoshop. Para o escore de Ishak, observamos os seguintes índices de Fibrose (IF) médios: 0,8% 0,0 (estágio 0), 2.4% 0,6 (estágio 1), 4,7% 1,6 (estágio 2), 7,4% 1,4 (estágio 3), 14,9% 3,7 (estágio 4), 23,4% 2,9 (estágio 5) e 34,5% 1,5 (estágio 6). Para a classificação METAVIR: 0,8% 0,1 (estágio F0), 3,8% 1,8 (estágio F1), 7,4% 1,4 (estágio F2), 20,4% 5,2 (estágio F3) e 34,5% 1,5 (estágio F4). Observamos uma excelente correlação entre os índices de fibrose da AID e os escores de Ishak (r=0,94; p<0,001) e METAVIR (r=0,92; p<0,001). Em relação à indicação de tratamento antiviral, foi observado IF médio de 16,4%. Em relação ao diagnóstico de cirrose, foi observado IF médio de 26,9%, para o escore de Ishak, e 34,5% para a classificação METAVIR. A reprodutibilidade intra-observador foi excelente. Este novo método de análise de imagens digitais para a quantificação de fibrose hepática tem custo acessível e foi desenvolvido com tecnologia que está disponível em todo o mundo, permitindo identificar com precisão todos os estágios de fibrose, com excelente reprodutibilidade intra-observador.
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1 carta (mecanografiada) ; 190x250mm
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Los enzimas son piezas fundamentales en el correcto funcionamiento de cualquier sistema biológico. Gracias a su naturaleza proteica y a las estructuras tridimensionales complejas que son capaces de adoptar, estas moléculas actúan como catalizadores de reacciones químicas. L a función de los enz imas es disminuir la energía de activación de la reacción, aumentando de este modo la velocidad de reacción. L o s enzimas no alteran el balance e nergético de las reacciones en que intervienen, ni modifican, por lo tanto, el equilibrio de la reacción . Por este motivo, en las reacciones catalizadas por enzimas se observa una mayor rapidez a la hora de alcanzar el equilibrio. La ciencia que estudia l a velocidad de las reacciones químicas que son catalizadas por enzimas es la cinética enzimática , e n la cual , las moléculas sobre las que actúan los enzimas se denominan sustratos y las moléculas resultantes de la conversión productos. El estudio de la cin ética de un enzima permite explicar los detalles de su mecanismo catalítico, su papel en el metabolismo o incluso cómo se controla su actividad en la célula. Las dos propiedades más importantes a la hora de trabajar con enzimas son: el tiempo que tarda en saturarse con un sustrato en particular y la velocidad máxima de reacción que puede alcanzar. Para el estudio de estas propiedades en el laboratorio se realizan los ensayos enzimáticos. El procedimiento a seguir en estos casos es medir la aparición de un producto o la desaparición de un sustrato frente al tiempo.
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Este trabajo se centra en la inmovilización de la lipasa B de Candida antarctica en nanopartículas magnéticas y la posterior caracterización cinética de su actividad sintética en medios orgánicos para la pr oducción de biodiesel. La historia del biodiesel comienza en 1893, cuando Rudolph Diesel, el padre del motor diésel, puso en marcha el primer motor de este tipo. Más tarde, en 1900, Diesel ganó el Grand Prix en la Feria Mundial de París con su m otor impulsado por un biodiesel de aceite de cacahuete. En 1903, además, comenzó la producción del Modelo T de Henry Ford, diseñado para utilizar etanol como combustible. Diesel creía que la utilización de biodiesel era el futuro de la automoción: “ el uso de aceites vegetales como combustibles para motor puede parecer insignificante hoy en día, pero estos aceites puede n convertirse, con el transcurso del tiempo, en combustibles tan importantes como el petróleo y el carbón lo son hoy en día ” Sin embargo, a p artir de 1920, los fueles basados en petróleo comenzaron a ganar terreno, debido a su mayor eficiencia, menor precio y mejor disponibilidad. De esta forma, el mercado de los biofueles quedó relegado hasta que las distintas crisis del petróleo (1973, 1979, 19 90) unidas a la creciente preocupación por la polución y la c onservación del medio ambiente, además de al aumento de la población y por tanto de la demanda de combustibles , llevaron a devolve r la mirada a estos fueles . Fue en esta época cuando comenzó, p rincipalmente en EEUU y Brasil, la producción a gran escala de biocombustibles de primera generación, basados en la utilización de excedentes agrícolas como el maíz y la caña de azúcar para la producción de bioetanol y aceites de maíz y grasas animales par a la producción de biodiesel .