Malaria Vaccine Adjuvants: Latest Update and Challenges in Preclinical and Clinical Research

There is no malaria vaccine currently available, and the most advanced candidate has recently reported a modest 30% efficacy against clinical malaria. Although many efforts have been dedicated to achieve this goal, the research was mainly directed to identify antigenic targets. Nevertheless, the latest progresses on understanding how immune system works and the data recovered from vaccination studies have conferred to the vaccine formulation its deserved relevance. Additionally to the antigen nature, the manner in which it is presented (delivery adjuvants) as well as the immunostimulatory effect of the formulation components (immunostimulants) modulates the immune response elicited. Protective immunity against malaria requires the induction of humoral, antibody-dependent cellular inhibition (ADCI) and effector and memory cell responses. This review summarizes the status of adjuvants that have been or are being employed in the malaria vaccine development, focusing on the pharmaceutical and immunological aspects, as well as on their immunization outcomings at clinical and preclinical stages.

The precautionary approach and the management of the European eel (Anguilla anguilla) – critical remarks

Recruitment and commercial catches of European eel have been in decline since the late 1970s. So far, the reasons are not well understood. A range of potential natural and anthropogenic reasons have been discussed, but the relative importance of the factors is unknown. As a consequence of the decline in recruitment an urgent need for protective management measures was concluded. The main approach is to restrict the fishery on eel, in particular with reference to the precautionary approach. However, in view of the lack of knowledge on the factors responsible for the recruitment decline and by considering that many yellow and silver eel stocks in freshwaters depend on restocking by the fishery, such simplified conclusions are critically discussed. A concept for the sustainable management of eel has to include 1) research on the factors determining the population dynamics, in particular during the oceanic stages, 2) a stronger consideration of socio-economic aspects, and 3) intensified research on artificial reproduction and rearing of eel.

Some aspects of upwelling in the Gulf of Panama

ENGLISH: Strong coastal upwelling occurs in the Gulf of Panama regularly each year during the season, from about January through April, when strong northerly winds are blowing offshore. Because of the evident importance of upwelling to the ecology of the Gulf of Panama, we commenced in the fall of 1954 a study of various physical, chemical, and biological phenomena associated therewith. Observations were taken at bi-weekly intervals at a fixed location in the Gulf (approximately 10 miles SE of Taboga Island) to supplement the serial observations of sea level, sea temperature, and winds that have been gathered for many years by the Panama Canal Company. SPANISH: Cado año, en la estación de enero a abril, cuando los vientos del norte soplan vigorosamente frente a la costa, ocurre en el Golfo de Panamá un fuerte afloramiento costanero. Se cree que este afloramiento periódico en el Golfo de Panamá es responsable de la alta productividad biológica que sostiene considerables cantidades de organismos de importancia comercial. Esta región, por ejemplo, es una fuente importante de la especie Cetengraulis mysticetus) pez de carnada para el atún, (Alverson y Shimada, 1957) y mantiene una considerable pesca de camarones llamados langostinos (Burkenroad, Obarrio y Mendoza,1955). (PDF contains 54 pages.)

Some aspects of the age and growth of the anchoveta, Cetengraulis mysticetus, in the Gulf of Panama

ENGLISH: Length-frequency samples of anchovetas were collected from January 1956 to March 1963. The findings for the most part corroborate those of previous studies in regard to the general pattern of age and growth. Recent tag returns demonstrate that some of the fish survive at least to the beginning of their fourth year of life. In 1961 and 1962 the fish were considerably larger than in any previous year for which data are available. The annual variation in the size of the young of the year is apparently related to the amount of upwelling and the density of the population during the early months of the year. SPANISH: De enero de 1956 a marzo de 1963 se recolectaron muestras de las frecuencias de longitud de las anchovetas. Las investigaciones, en su mayor parte, corraboran los resultados de los estudios anteriores referentes a los patrones generales de la edad y el crecimiento. Recobros recientes de mareas demuestran que algunos de los peces sobreviven por lo menos hasta el comienzo de su cuarto año de vida. En 1961 y 1962 los peces fueron considerablemente más grandes que en cualquiera de los años anteriores de los que se tienen datos disponibles. La variación anual en el tamaño de los peces jóvenes del año está aparentemente relacionada con el volumen del afloramiento y la densidad de la población durante los primeros meses del año. (PDF contains 51 pages)

ICGE: an R package for detecting relevant clusters and atypical units in gene expression

Background: Gene expression technologies have opened up new ways to diagnose and treat cancer and other diseases. Clustering algorithms are a useful approach with which to analyze genome expression data. They attempt to partition the genes into groups exhibiting similar patterns of variation in expression level. An important problem associated with gene classification is to discern whether the clustering process can find a relevant partition as well as the identification of new genes classes. There are two key aspects to classification: the estimation of the number of clusters, and the decision as to whether a new unit (gene, tumor sample ... ) belongs to one of these previously identified clusters or to a new group. Results: ICGE is a user-friendly R package which provides many functions related to this problem: identify the number of clusters using mixed variables, usually found by applied biomedical researchers; detect whether the data have a cluster structure; identify whether a new unit belongs to one of the pre-identified clusters or to a novel group, and classify new units into the corresponding cluster. The functions in the ICGE package are accompanied by help files and easy examples to facilitate its use. Conclusions: We demonstrate the utility of ICGE by analyzing simulated and real data sets. The results show that ICGE could be very useful to a broad research community.

The Distribution of Juvenile Fishes in Maryland Coastal Bays in Relation to Environmental Factors: a Multivariate Analysis

Fish assemblage structure of Maryland's coastal lagoon complex was analyzed for spatial and seasonal patterns for the period 1991-2000. Data was made available by Maryland Department of Natural Resources from their MD Coastal Bays Finfish Survey. Dominant species from separate trawl and wiw surveys included blue crab Callinectes sapidus (erroneously included here as a "fish" due to its dominance and commercial importance), bay anchovy Anchoa mitchilli, spot Leiostomous xanthurus, silver perch Bairdiella ehrysoura, and Atlantic menhaden Brevwrtia tyrannus. Ninety-four fish species were identified in the two surveys, a diversity substantially higher than other survey records for Middle Atlantic Bight estuarine and lagoon systems (richness=26 to 78 species). Total species richness for the trawl survey was highest in Chincoteague and lowest in Assawoman and Sinepuxent. On the other hand, mean richness per tow (-area) and related Shannon Weiner Diversity Index were significantly higher in the northern two bays (Assawoman and Isle of Wight Bays) than in the two southern bays (Chincoteague or Sinepuxent Bays). For the seine survey, effort-adjusted diversity indices were significantly lower for Chincoteague Bay than for the other three bays. Higher relative abundances were observed in the northern bays than in the southern bays. The trawl survey exhibited the lowest catch-per-site in Sinepuxent Bay and the highest in Assawoman Bay. The seine survey had the lowest catch-per-site in Chincoteague Bay while the other three embayments were of similar magnitude. There was clear seasonality in assemblage structure with peak abundance and diversity in the summer compared to other seasons. Blue crabs in particular showed a c. 2-fold decline in relative abundance from early summer to fall, which is likely attributable to harvest removals (i.e., an exploitation rate of c. 50%). Seagrass coverage, although increasing over the course of the 10 year survey, did not have obvious effects on species diversity and abundance across or within the embayments, although it did have positive associations with two important species: bay anchovy and summer flounder Pavalich thys dentatus. Atlantic menhaden were most dominant in Assawoman Bay, which could be related to higher primary production typically observed in this Bay in comparison to the other three. (PDF contains 99 pages)

Die Reproduktion von Dorschen (Gadus morhua L. und Gadus morhua callarias L. ) in der Ostsee unter besonderer Berücksichtigung der Arkonasee. Teil I: Allgemeiner Verlauf des jährlichen Reifeprozesses und der Laichaktivitäten in den verschiedenen Gebieten

From 1993 to 2003 special surveys were conducted to analyse temporal and spatial aspects of the spawning activities of cod in the Baltic Sea. The ICES advice for cod in the Baltic Sea is based on yearly stock assessments of two separate stocks the western (SD 22 – 24) and the eastern stock (SD 25 – 32). Both stocks are characterized by different spawning seasons. The general progression of the maturity suggests that two types of development can be distinguished. In the western Baltic Sea (SD 22) the maturity development is temporal stable, with a relative short, main spawning period from March to April - spring spawner. In the Arkona Sea and Bornholm Basin the main spawning season starts in June and probably finishes in September - summer spawner. The proportion of spawners in summer is significantly higher than in spring in the Arkona Sea and Bornholm Basin. This again underlines the importance of the Arkona Sea for the reproduction success of the eastern Baltic cod stock. The analysis furthermore show, that the proportion of male spawners was significantly higher than the proportion of female spawners in all areas and the investigated months. This observation suggests that the reproductive success is only limited by the number of female cod which participates in the spawning process.

Die Reproduktion von Dorschen (Gadus morhua L. und Gadus morhua callarias L.) in der Ostsee unter besonderer Berücksichtigung der Arkonasee. Teil II: Statistische Analysen zum Anteil reproduktiv aktiver Dorsche in Bezug auf gebietsspezifische Unterschiede und Gemeinsamkeiten, sowie deren mögliche Ursachen.

Surveys were conducted to analyse temporal and spatial aspects of the spawning activities of cod in the Baltic Sea from 1993 to 2003. Part I of the article describes the general maturity development and the spawning activities in the western Baltic Sea, the Arkona Sea and the Bornholm Sea. The studies suggest that two types of spawner can be distinguished, the spring spawner in the western Baltic Sea and the summer spawner in the Arkona Sea and the Bornholm Basin. The descriptive analysis is supported by statistical studies presented in this article. It is shown, that the proportion of spawning individuals is significantly higher in summer than in spring in the ArkonaSea and the Bornholm Sea. Furthermore, it is shown that reproductive mixing of both types of spawner is possible in the Arkona Sea in May/June due to the hydrographical conditions in the Arkona Sea which were suitable in 8 of 10 years for successful reproduction of both Baltic cod stocks, and that spatial expansion of spawning activities of the eastern Baltic cod stock into the Arkona Sea is positive correlated with the size of spawning stock in the Bornholm Sea.

Aspects of quality control of wind profiler measurements in complex topography

It is well known in the scientific community that some remote sensing instruments assume that sample volumes present homogeneous conditions within a defined meteorological profile. At complex topographic sites and under extreme meteorological conditions, this assumption may be fallible depending on the site, and it is more likely to fail in the lower layers of the atmosphere. This piece of work tests the homogeneity of the wind field over a boundary layer wind profiler radar located in complex terrain on the coast under different meteorological conditions. The results reveal the qualitative importance of being aware of deviations in this homogeneity assumption and evaluate its effect on the final product. Patterns of behavior in data have been identified in order to simplify the analysis of the complex signal registered. The quality information obtained from the homogeneity study under different meteorological conditions provides useful indicators for the best alternatives the system can offer to build wind profiles. Finally, the results are also to be considered in order to integrate them in a quality algorithm implemented at the product level.

Biosimilar medicines in dermatology: key aspects.

Article reproduced (or made available) with permission of Practical Dermatology®, www.practicaldermatology.com.

Identification of West African estuarine shrimp and crab larvae

The paper deals with the decapod crustacean larvae likely to be found in fresh and brackish waters in tropical west Africa. It summarizes results from an ongoing program of describing larvae hatched directly from adults of known species, to provide the identification keys necessary for applied research on nursery grounds, plankton ecology and pollution effects. A preliminary key to stage - 1 larvae is given for approximately 40 species. In includes all the genera, and nearly all the species, known to produce larvae in fresh and low-salinity waters. The common species of higher salinity waters are also included

Preliminary observations on the feeding, habits and reproduction biology of Gymnarchus niloticus from Lake Chad

The preliminary results obtained from the study of stomach contents of specimens of Gymnarchus niloticus of a size ranging from 56 cm (66 grams) to 152 cm (12.0 kg.) from August to December, 1982 indicate for these sizes an exclusively piscivorous diet. The predominant prey species in Lake Chad are Tilapia/Sarotherodon , and Clarias . The prey is often cut in two parts before it is swallowed. Small prey may be swallowed whole. The implication of this prey capture method on prey-predator relationship and therefore the impact of the predator is discussed. The breeding season of Gymnarchus niloticus in Lake Chad has been deduced from observation of changes in gonad maturity stages and the results indicate that breeding takes place between August and November. Data are also presented on the fecundity, size of ripe eggs and probable size at maturity

Relative importance of Deep Creek Lake to other areas in respect to certain recreational and economic aspects

Presents a review of the recreational values and economic importance of Maryland Fishing waters. (PDF contains 5 pages)

Investment potentials in shellfish culture in Nigeria

Shellfish are a major but cheap protein source for human consumption as well as source of income for coastal towns and villages of the Niger Delta in Rivers State, Cross River, and Lagos States. A research into the nutritive value of some of these marine shellfish viz: bivalves (oyster - Crassostrea gasar and cockle - Anadara senilis); gastropods (periwinkle - Tympanotonus fuscatus, obtuse periwinkle - Semifusus morio and the giant whelk - Thais callifera) and mangrove crabs (green crab - Goniopsis pelli, ghost crab - Cardisoma ormatum, and common blue crab - Callinectes latimanus) was carried out to compare their quality and cost with beef, chicken meat, pork and egg in order to identify those most suitable for commercial culture. Results show that all shellfish had at least 16% crude protein except blue crab (13.38%). All shellfish had higher protein content than egg (13.36%). Cockle with protein content 25.47% compared favourably with beef, (29.60%). Beef, chicken meat and pork cost 11.50, 9.00 and 8.00 per kilo respectively while oyster, periwinkle and the common blue crab cost 3.50, 3.00, and 1.50 per kilo respectively. Oysters and Cockles are recommended for commercial culture based on the findings of this research