Anfíbios em uma floresta úmida da vertente pacífico ao sudoeste da Colômbia: avaliação da diversidade e sistemática de espécies, e o uso de recursos alimentares

Na Colômbia ocorrem 787 espécies de anfíbios. Por causa da preocupação com o estado de conservação de muitas dessas espécies, tem se sugerido que na Colômbia deveriam-se priorizar as pesquisas em taxonomia e ecologia em regiões sub-amostradas a fim de intensificar o conhecimento e conservação dos anfíbios colombianos. Baseados em uma análise cienciométrica de 319 trabalhos sobre a ecologia dos anfíbios colombianos publicados entre 1840 e 2014 (No Capítulo 1), identificamos as tendências nos esforços realizados em distintos temas de pesquisa, e a distribuição regional e taxonômica desses estudos. A maioria dos estudos (67%) foi realizada na região Andina colombiana em comparação com outras regiões naturais da Colômbia. Apenas 46% das espécies de anfíbios ocorrendo na Colômbia foi tratada nos estudos analizados, e a maioria (58%) delas é da região Andina. Entre as publicações analizadas identificamos 14 temas de pesquisa em ecologia, dos quais ecologia reprodutiva (26%), conservação de espécies (23%) e dieta (14%) foram os mais pesquisados. Nossos dados mostraram que na Colômbia há um considerável avanço na pesquisa sobre a ecologia dos anfíbios do país, mas ainda são necessários esforços para cobrir muitos vazios de informação para muitas regiões e para muitas espécies de anfíbios que possuem dados incipientes. No sudoeste da Cordilheira Ocidental colombiana há pouca informação ecológica sobre os anfíbios ali ocorrendo. A fim de saber alguns aspectos ecológicos dessas espécies, desenvolvimos três estudos sobre a diversidade e ecologia de anfíbios presentes na Reserva Natural Río Ñambí (a seguir RNRÑ). No Capítulo 2 apresentamos uma análise sistemática do gênero Andinophryne (Família Bufonidae), composto por três espécies, A. atelopoides, A. colomai (presente na RNRÑ) e A. olallai. As filogenias mostraram que Andinophryne está incorporado dentro de Rhaebo. Portanto, sinonimizamos Andinophryne sob Rhaebo e discutimos as sinapomorfias morfológicas putativas para Rhaebo. Além, fornecemos informações ecológicas e sobre o estado de conservação das três espécies incluídas na nova combinação taxonômica. No Capítulo 3 apresentamos uma lista de 19 espécies de anfíbios pertencentes a oito famílias, com uma dominância numérica da família Craugastoridae e do gênero Pristimantis. As espécies com a maior abundância relativa (> 25%) foram Pristimantis labiosus e P. verecundus. Sete diferentes modos de reprodução foram reconhecidos, com a maioria das espécies (68%) possuindo desenvolvimento direto de ovos. Cinco (26%) das espécies registradas estão classificadas dentro das categorias de maior ameaça de extinção. Reportamos para sete espécies a extensão da faixa de distribuição geográfica latitudinal na Colômbia. No Capítulo 4 comparamos a dieta de jovens e adultos de P. labiosus para identificar se houve uma mudança ontogenética no tamanho de presa consumido com o aumento na largura da boca. A dieta foi composta por 19 categorias de presas (> artrópodes), com as duas classes de idade consumindo um similar espectro de categorias. Os jovens têm um nicho trófico maior (0,45) do que os adultos (0,25), com uma sobreposição de nicho relativamente baixa (0,39) entre eles. Apesar da diferencia na largura da boca entre jovens e adultos, não houve uma correspondente mudança ontogenética no tamanho de presa consumida. Consideramos P. labiosus como um predador generalista que parece consumer uma ampla gama de tipos e tamanhos de presas

Avaliação estereológica glomerular em rins de ratos após isquemia-reperfusão por clampeamento arteriovenoso e arterial

A técnica de isquemia-reperfusão tem sido utilizada em cirurgias conservadoras do rim como a nefrectomia parcial e em transplantes renais. Para se realizar a isquemia pode-se fazer o bloqueio do fluxo sanguíneo da artéria renal ou o bloqueio simultâneo da artéria e da veia renal. O evento isquêmico acarreta em dano celular ao rim principalmente pelo estresse oxidativo local e a liberação de radicais livres assim como o aumento da resposta inflamatória. Diversos autores verificaram lesão renal após a isquemia-reperfusão, porém, apenas testes funcionais foram realizados até o momento. Os autores que tentaram avaliar a lesão morfológica do rim apenas fizeram a quantificação de escores subjetivos. O nosso objetivo é avaliar por quantificação estereológica o dano causado pela isquemia-reperfusão comparando o clampeamento somente arterial com o clampeamento arteriovenoso. Utilizamos 24 ratos wistar, machos, de quatro meses de idade. Os animais foram divididos em três grupos: o grupo Sham (n=8), o grupo de clampeamento somente da artéria renal (n=8) e o grupo de clampeamento simultâneo da artéria e da veia renal (n=8). Os animais foram submetidos a laparotomia mediana. Os animais do grupo Sham permaneceram os 60 minutos anestesiados mas sem obstrução do fluxo sanguíneo de seus vasos renais. Os animais do grupo de clampeamento arterial foram submetidos à clampeamento de sua arterial renal esquerda por 60 minutos e os animais do grupo de clampeamento arterial e venoso tiveram seus vasos renais esquerdos clampeados simultaneamente e em bloco pelo mesmo tempo. Após os 60 minutos os animais foram suturados e mantidos por 30 dias em caixas próprias sendo mortos por sobredose anestésica após decorrido esse tempo. Os rins foram coletados e mantidos em solução de formalina tamponada e posteriormente processados para análise histológica e estereológica. Foram analisados a densidade volumétrica (Vv) dos glomérulos, o número de glomérulos/mm3(Nv) e o volume glomerular médio (VGM). A Vv e Nv se encontrou reduzida nos rins esquerdos submetidos à isquemia mas foi somente significativa nos animais do grupo de clampeamento arterial e venoso. Mesmo usando o rato como modelo animal experimental, a partir de nossos resultados recomendamos o uso do clampeamento somente arterial nos casos em que mínina lesão ao rim é imperiosa.

Avaliação da indução de lesões no DNA por lasers terapêuticos de baixa potência

Na medicina regenerativa há uma crescente utilização de lasers de baixa intensidade em protocolos terapêuticos para tratamento de doenças em tecidos moles e no tecido ósseo. Lasers emitem feixes de luz com características específicas, nas quais o comprimento de onda, a frequência, potência e modo de missão são propriedades determinantes para as respostas fotofísica, fotoquímica e fotobiológica. Entretanto, sugere-se que lasers de baixa potência induzem a produção de radicais livres, que podem reagir com biomoléculas importantes, como o DNA. Essas reações podem causar lesões e induzir mecanismos de reparo do DNA para preservar a integridade do código genético e homeostase celular. Portanto, o objetivo deste trabalho foi avaliar lesões no DNA de células do sangue periférico de ratos Wistar e a expressão dos genes ERCC1 e ERCC2 em tecidos biológicos expostos a lasers de baixa intensidade em comprimentos de onda, fluências, potências e modos de emissão utilizados em protocolos terapêuticos. Para tal, amostras de sangue periférico foram expostas ao laser vermelho (660 nm) e infravermelho (808 nm) em diferentes fluências, potências e modos de emissão, e a indução de lesões no DNA foi avaliada através do ensaio cometa. Em outros experimentos, lesões no DNA foram analisadas através do ensaio cometa modificado, utilizando as enzimas de reparo: formamidopirimidina DNA glicosilase (FPG) e endonuclease III. Pele e músculo de ratos Wistar foram expostos aos lasers e amostras desses tecidos foram retiradas para extração de RNA, síntese de cDNA e avaliação da expressão dos genes por PCR quantitativo em tempo real. Os dados obtidos neste estudo sugeriram que a exposição aos lasers induz lesões no DNA dependendo da fluência, potência e modo de emissão, e que essas lesões são alvos da FPG e endonuclease III. A expressão relativa do RNAm de ERCC1 e de ERCC2 foi alterada nos tecidos expostos dependendo do comprimento de onda e fluência utilizada. Os resultados obtidos neste estudo sugerem que danos oxidativos no DNA poderiam ser considerados para segurança do paciente e eficácia terapêutica, bem como alterações na expressão dos genes de reparo do DNA participariam dos efeitos de bioestimulação que justificam as aplicações terapêutica de lasers de baixa potência.

An ecological characterization of the Stellwagen Bank National Marine Sanctuary Region: oceanographic, biogeographic, and contaminants assessment

The mission of NOAA’s National Marine Sanctuary Program (NMSP) is to serve as the trustee for a system of marine protected areas, to conserve, protect, and enhance their biodiversity, ecological integrity, and cultural legacy while facilitating compatible uses. Since 1972, thirteen National Marine Sanctuaries, representing a wide variety of ocean environments, have been established, each with management goals tuned to their unique diversity. Extending from Cape Ann to Cape Cod across the mouth of Massachusetts Bay, Stellwagen Bank National Marine Sanctuary (NMS) encompasses 2,181 square kilometers of highly productive, diverse, and culturally unique Federal waters. As a result of its varied seafloor topography, oceanographic conditions, and high primary productivity, Stellwagen Bank NMS is utilized by diverse assemblages of seabirds, marine mammals, invertebrates, and fish species, as well as containing a number of maritime heritage resources. Furthermore, it is a region of cultural significance, highlighted by the recent discovery of several historic shipwrecks. Officially designated in 1992, Stellwagen Bank became the Nation’s twelfth National Marine Sanctuary in order to protect these and other unique biological, geological, oceanographic, and cultural features of the region. The Stellwagen Bank NMS is in the midst of its first management plan review since designation. The management plan review process, required by law, is designed to evaluate, enhance, and guide the development of future research efforts, education and outreach, and the management approaches used by Sanctuaries. Given the ecological and physical complexity of Stellwagen Bank NMS, burgeoning anthropogenic impacts to the region, and competing human and biological uses, the review process was challenged to assimilate and analyze the wealth of existing scientific knowledge in a framework which could enhance management decision-making. Unquestionably, the Gulf of Maine, Massachusetts Bay, and Stellwagen Bank-proper are extremely well studied systems, and in many regards, the scientific information available greatly exceeds that which is available for other Sanctuaries. However, the propensity of scientific information reinforces the need to utilize a comprehensive analytical approach to synthesize and explore linkages between disparate information on physical, biological, and chemical processes, while identifying topics needing further study. Given this requirement, a partnership was established between NOAA’s National Marine Sanctuary Program (NMSP) and the National Centers for Coastal Ocean Science (NCCOS) so as to leverage existing NOAA technical expertise to assist the Sanctuary in developing additional ecological assessment products which would benefit the management plan review process.

Skin lesions on common bottlenose dolphins (Tursiops truncatus) from three sites in the Northwest Atlantic, USA

Skin disease occurs frequently in many cetacean species across the globe; methods to categorize lesions have relied on photo-identification (photo-id), stranding, and bycatch data. The current study used photo-id data from four sampling months during 2009 to estimate skin lesion prevalence and type occurring on bottlenose dolphins (Tursiops truncatus) from three sites along the southeast United States coast [Sarasota Bay, FL (SSB); near Brunswick and Sapelo Island, GA (BSG); and near Charleston, SC (CHS)]. The prevalence of lesions was highest among BSG dolphins (P=0.587) and lowest in SSB (P=0.380), and the overall prevalence was significantly different among all sites (p<0.0167). Logistic regression modeling revealed a significant reduction in the odds of lesion occurrence for increasing water temperatures (OR=0.92; 95%CI:0.906-0.938) and a significantly increased odds of lesion occurrence for BSG dolphins (OR=1.39; 95%CI:1.203-1.614). Approximately one-third of the lesioned dolphins from each site presented with multiple types, and population differences in lesion type occurrence were observed (p<0.05). Lesions on stranded dolphins were sampled to determine the etiology of different lesion types, which included three visually distinct samples positive for herpesvirus. Although generally considered non-fatal, skin disease may be indicative of animal health or exposure to anthropogenic or environmental threats, and photo-id data provide an efficient and cost-effective approach to document the occurrence of skin lesions in free-ranging populations.

Contrasting seasonal patterns in dimethylsulfide, dimethylsulfoniopropionate, and chlorophyll a in a shallow North Carolina estuary and the Sargasso Sea

Time series measurements of dimethylsulfide (DMS), particulate dimethylsulfoniopropionate (DMSPp), chlorophyll a (chl a), algal pigments, major nutrients, and the potential activity of DMSP lyase enzymes were made over a 2 yr period (6 March 2003 to 28 March 2005) near the mouth of the shallow, tidally mixed Newport River estuary, North Carolina, USA. DMSPp had a mean of 43 ± 20 nM (range = 10.5 to 141 nM, n = 85) and DMS a mean of 2.7 ± 1.2 nM (range = 0.9 to 7.0 nM). The mean DMS in Gallants Channel was not significantly different from that measured in the Sargasso Sea near Bermuda during a previous 3 yr time series study (2.4 ± 1.5 nM), despite there being a 43-fold higher mean chl a concentration (4.9 ± 2.4 µg l–1) at the coastal site. In winter, DMS was low and chl a was high in the surface waters of the Sargasso Sea, while the opposite was true at the coastal site. Consequently, DMS concentrations per unit algal chl a were on average 170 times higher in the Sargasso Sea than at the coastal site during the summer, but only 7 times higher during the winter. The much higher chl a-specific DMS concentrations at the oceanic site during the summer were linked to higher ratios of intracellular DMSP substrate and DMSP lyase enzyme per unit chl a. These differences in turn appear to be linked to large differences in nutrient concentrations and solar UV stress at the 2 sites and to associated differences in the composition of algal assemblages and physiological acclimation of algal cells.

A remarkable new species of Psednos (Teleostei: Liparidae) from the western North Atlantic Ocean

Psednos rossi new species (Teleostei: Liparidae) is described from two specimens collected in the North Atlantic Ocean off Cape Hatteras, North Carolina, at depths of 500–674 m. Psednos rossi belongs to the P. christinae group, which includes six other species and is characterized by 46–47 vertebrae and the absence of a coronal pore. Psednos rossi differs from those six species by having characters unique within the genus: straight spine, body not humpbacked at the occiput, and a very large mouth with a vertical oral cleft. Other distinguishing characters include a notched pectoral fin with 15–16 rays, eye 17–19% SL, and color in life orange-rose. With P. rossi, the genus Psednos as currently known includes 26 described and five undescribed species of small meso- or bathypelagic liparids from the Atlantic, Pacific, and Indian Oceans.

Reproductive seasonality, fecundity, and spawning frequency of tautog (Tautoga onitis) in the lower Chesapeake Bay and coastal waters of Virginia

The tautog, Tautoga onitis (Linnaeus), ranges from Nova Scotia to South Carolina and has become a popular target for recreational and commercial fisheries. Although tautog are a multiple spawning species, reproductive potential, measured as annual fecundity, has not been estimated previously with methods (batch fecundity, spawning frequency) necessary for a species with indeterminate annual fecundity. A total of 960 tautog were collected from the mouth of the Rappahannock River in the lower Chesapeake Bay to 45 km offshore of Virginia’s coastline to investigate tautog reproductive biology in the southern portion of the species range. Tautog did not exhibit a 1:1 sex ratio; 56% were females. Male tautog reached 50% maturity at 218 mm TL, females at 224 mm TL. Tautog spawned from 7 April 1995 to 15 June 1995, at locations from the York River to 45 km offshore. Batch fecundity estimates ranged from 2800 to 181,200 eggs per spawning for female tautog age 3–9, total length 259– 516 mm. Mean batch fecundity ±SEM for female tautog ages 4–6 was 54,243 ±2472 eggs and 106,256 ±3837 eggs for females ages 7–9. Spawning frequency was estimated at 1.2 days, resulting in 58 spawning days per female in 1995. Estimates of potential annual fecundity for tautog ages 3–9 ranged from 160,000 to 10,510,000 eggs.

Efficiency of bycatch reduction devices in small otter trawls used in the Florida shrimp fishery

Two bycatch reduction devices (BRDs)—the extended mesh funnel (EMF) and the Florida fisheye (FFE)—were evaluated in otter trawls with net mouth circumferences of 14 m, 17 m, and 20 m and total net areas of 45 m2. Each test net was towed 20 times in parallel with a control net that had the same dimensions and configuration but no BRD. Both BRDs were tested at night during fall 1996 and winter 1997 in Tampa Bay, Florida. Usually, the bycatch was composed principally of finfish (44 species were captured); horseshoe crabs and blue crabs seasonally predominated in some trawls. Ten finfish species composed 92% of the total finfish catch; commercially or recreationally valuable species accounted for 7% of the catch. Mean finfish size in the BRD-equipped nets was usually slightly smaller than that in the control nets. Compared with the corresponding control nets, both biomass and number of finfish were almost always less in the BRD-equipped nets but neither shrimp number nor biomass were significantly reduced. The differences in proportions of both shrimp and finfish catch between the BRD-equipped and control nets varied between seasons and among net sizes, and differences in finfish catch were specific for each BRD type and season. In winter, shrimp catch was highest and size range of shrimp was greater than in fall. Season-specific differences in shrimp catch among the BRD types occurred only in the 14-m, EMF nets. Finfish bycatch species composition was also highly seasonal; each species was captured mainly during only one season. However, regardless of the finfish composition, the shrimp catch was relatively constant. In part as a result of this study, the State of Florida now requires the use of BRDs in state waters.

Lunar, diurnal and tidal periodicity in relation to the prawn abundance and migration in the Godavari estuarine systems

Preliminary investigations to study the lunar, diurnal and tidal periodicity in abundance and migrations of prawns were made in the Bairavapalam distributary of the Goutami branch of the Godavari estuary during the period of November 1961 to July 1962. The study was based on observation of the catches of a stake net (bag net) operated near the mouth of the estuary. Records of the catches were maintained tidewise daily. Comparative estimates of abundance were made on the basis of catch per hour's operation. It was generally observed that the catches were higher during the darker half of the month than in the brighter fortnight. The landings during low tides were generally higher than those during high tides and usually heavier catches were made during nocturnal low tides than during the day low tides. A continuous inward and outward (immigration and emigration) movement of prawns of all size groups was observed in the estuary from November to July. In general, more penaeid prawns were found to be immigrating at dawn than at dusk. Similarly, the number of emigrants was also found to be generally higher during the new moon period than during the full moon. Metapenaeus monoceros showed an almost distinct nocturnal periodicity in migration, while no such periodicity was observed, distinctly, in other species. In the case of Penaeus indicus the movement of migrants was prolonged. In M. brevicornis the migrants were scarce till March and thereafter increased numerically. The migrant forms of Metapenaeus dobsoni continued to be abundant till May with peak periods in January and February. The migratory pattern of Metapenaeus affinis was similar to that of Metapenaeus brevicornis, though the migrants of the former species appeared a month earlier than the latter. Intensive studies over extended areas for longer periods are required to understand clearly the migratory pattern of the various species. The phenomenon of immigration of prawns can be clearly understood only by vital staining or tagging studies. Perhaps the emigrants might be returning with the succeeding changing life. To verify this, laboratory experiments, by vital stains, were conducted. The marked specimens, if released during the low tides on a large scale, may be recaptured during the subsequent high tides and the duration also may be calculated. At least some percentage of the emigrants remains in the sea for maturity and breeding.

Predatory behaviour of a snakehead fish (Channa striatus Bloch)

The predatory behaviour of a snake-head, Channa striatus (Bloch) on Labeo rohita fingerlings was studied in the laboratory. The study was conducted with six C. striatus (120 to 210 g and 22 to 28 cm) over 24h a day for 3 weeks. Three different sizes prey of large (2.00g and 5.8cm), medium (1.30g and 4.5cm) and small (0.72g and 3.5cm) were used for the first week and then medium size prey for 2nd and 3rd weeks. All the predators preferred eating the small group of L. rohita although all three size groups of L. rohita offered were available. It was found that the prey fishes remained together aside of the aquarium from the predator. Predator first targeted a prey, drove fast towards it, the prey tried to escape from the predator's attack using a specific route and finally the predator grasped the prey on head first and then engulfed. The handling time ranged between 45 and 50 sec. The time of peak feeding was found in the morning and in the evening of day. When 2 or 3 predators were kept in one aquarium, they engaged in fighting, head on, followed by an attack on the mouth region by the dominant one, and subsequently on the pectoral fin and caudal fin of the defeating one. After 2-3 days they became habituated to remain together and did not involve themselves in fighting.

Pathogenicity of Aeromonas sobria to Thai silver barb (Barbodes gonionotus Bleeker) and its sensitivity to some antibiotic agents

Five isolates of Aeromonas sobria, collected from the diseased fish were selected for detection the pathogenicity following water-born infection method on silver barbs (Barbodes gonionotus) at the selected exposure dose 2.5x10⁸ CFU/ml which was standardized by preliminary test. In the experimental condition lesion and mortality were found in fishes. Among the isolate, Ass17 Ass19, Ass31 and Ass36 were successfully infected 20-60% fishes. Another isolate Ass20 was found non-pathogenic. Drug sensitivity test was performed by six antibiotics viz. Oxytetracycline, Oxolinic acid, Chloramphenicol, Stilphamethozazole, Streptomycin, Erythromycin. All the isolates showed variable reaction patterns to antibiotics. Most of the isolates were found sensitive to Oxytetracycline (OT), Oxolinic acid (OA) and Chloramphenicol (C) but resistance to Erythromycin and Sulphamethoxazole (SXT). Isolate Ass31 found resistant to Oxolinic acid.

On the relative utility of different methods to increase the vertical height in an otter trawl

Comparative fishing experiments to study the relative utility of different methods for increased vertical spread of bottom trawl and the availability of off bottom fishes in the region were made using gussets, kite, separate float line and side panels on a two seam net. The catch rates as well as composition of fish were studied. The opening of the trawl mouth, both horizontally and vertically, under different operating gears and towing tension on warps were measured and estimated for comparison purposes. Better catch rate with good quality fishes was obtained with the gear operated with separate float line. With kite, the vertical spread was increased with less catch indicating poor concentration of off bottom fishes.

A case study on the impact of industrial effluent disposal on the fishery of Amba River estuary, Maharashtra

The impact of waste discharge on fishery resources is a matter of great concern. The accepted norm in all environmental impact assessment studies is to avoid areas of high fishery potential while locating a marine outfall. Contemplating on this aspect a case study was conducted in the Amba River estuary before and after the establishment of a petrochemical complex at Nagothane. The treated wastewater from this complex is released through a subsurface outfall after adopting effective control measures for marine disposal of waste. Experimental trawling was done at five locations covering a distance of 30 km during 1990 to 1991. The catch rate within the estuary varied from 0.6 to 255 kg/h (av 24 kg/h). The trend indicated considerable decrease in fishery potential from the mouth of the estuary (av 64 kg/h) to the upstream location (av 11 kg/h). A total of 49 species of fishes, 16 species of prawns, 7 species of crabs and 1 species of lobster were identified from the collections. Number of species gradually increased from the interior segment at Dharamtar (8) to the outer area near Revas (18). A comparison of the quantitative and qualitative nature of the post outfall and pre outfall data revealed only marginal difference. The study indicates that if necessary precautions are taken to render the waste harmless the marine ecology will hardly be affected.