RAPD genomic fingerprinting differentiates Thiobacillus ferrooxidans strains

The PCR-based technique, involving the random amplification of polymorphic DNA (RAPD), was optimized and used for assessing genomic variability among eight Thiobacillus ferrooxidans strains. RAPD fingerprints presented variation for the thirty primers used, giving a total of 269 polymorphic bands. Similarity coefficients between the strains were calculated, and UPGMA cluster analysis was used to generate a dendrogram showing relationships among them. Most primers divided T. ferrooxidans strains in two distinct groups - Group 1: S, SSP, V3, AMF and Group 2: CMV, FG-460, I-35, LR. We observed that the T. ferrooxidans strains used in this work have a high degree of genomic diversity and that RAPD is a powerful method to differentiate them.

Effect of high hydrostatic pressure processing on rheological and textural properties of probiotic low-fat yogurt fermented by different starter cultures

The effect of milk processing on rheological and textural properties of probiotic low-fat yogurt (fermented by two different starter cultures) was studied. Skim milk fortified with skim milk powder was subjected to three treatments: (1) thermal treatment at 85C for 30 min; (2) high hydrostatic pressure (HHP) at 676 MPa for 5 min; and (3) combined treatments of HHP (676 MPa for 5 min) and heat (85C for 30 min). The processed milk was fermented using two different starter cultures containing Streptococcus thermophilus, Lactobacillus delbrueckii ssp. bulgaricus, Lactobacillus acidophilus and Bifidobacterium longum at inoculation rates of 0.1 and 0.2%. Rheological parameters were determined and a texture profile analysis was carried out. Yogurts presented different rheological behaviors according to the treatment used, which could be attributed to structural phenomena. The combined HHP and heat treatment of milks resulted in yogurt gels with higher consistency index values than gels obtained from thermally treated milk. The type of starter culture and inoculation rate, providing different fermentation pathways, also affected the consistency index and textural properties significantly. The combined HHP and heat treatment of milks before fermentation, and an inoculation rate of 0.1% (for both cultures), led to desirable rheological and textural properties in yogurt, which presented a creamy and thick consistency that does not require the addition of stabilizers.

High hydrostatic pressure processing on microstructure of probiotic low-fat yogurt

The effect of milk processing on the microstructure of probiotic low-fat yogurt was studied. Skim milk fortified with skim milk powder was subjected to three treatments prior to innoculation: thermal treatment at 85 degrees C for 30 min, high hydrostatic pressure at 676 MPa for 5 min, and combined treatments of high hydrostatic pressure (HHP) and heat. The processed milk was then fermented by using two different starter cultures containing Streptococcus thermophilus, Lactobacillus delbrueckii ssp. bulgaricus, Lactobacillus acidophilus, and Bifidobacterium longum. The microstructure of heat-treated milk yogurt had fewer interconnected chains of irregularly shaped casein micelles, forming a network that enclosed the void spaces. on the other hand, microstructure of HHP yogurt had more interconnected clusters of densely aggregated protein of reduced particle size, with an appearance more spherical in shape, exhibiting a smoother more regular surface and presenting more uniform size distribution. The combined HHP and heat milk treatments led to compact yogurt gels with increasingly larger casein micelle clusters interspaced by void spaces, and exhibited a high degree of cross-linking. The rounded micelles tended to fuse and form small irregular aggregates in association with clumps of dense amorphous material, which resulted in improved gel texture and viscosity. (C) 2007 Elsevier Ltd. All rights reserved.

Molecular characterization of Acidithiobacillus ferrooxidans and A-thiooxidans strains isolated from mine wastes in Brazil

Nineteen strains of Acidithiobacillus ferrooxidans and Acidithiobacillus thiooxidans, including 12 strains isolated from coal, copper, gold and uranium mines in Brazil, strains isolated from similar sources in other countries and the type strains of the two species were characterized together with the type strain of A. caldus by using a combination of molecular systematic methods, namely ribotyping, BOX- and ERIC-PCR and DNA-DNA hybridization assays. Data derived from the molecular fingerprinting analyses showed that the tested strains encompassed a high degree of genetic variability. Two of the Brazilian A. ferrooxidans organisms (strains SSP and PCE) isolated from acid coal mine waste and uranium mine effluent, respectively, and A. thiooxidans strain DAMS, isolated from uranium mine effluent, were the most genetically divergent organisms. The DNA-DNA hybridization data did not support the allocation of Acidithiobacillus strain SSP to the A. ferrooxidans genomic species, as it shared only just over 40% DNA relatedness with the type strain of the species. Acidithiobacillus strain SSP was not clearly related to A. ferrooxidans in the 16S rDNA tree.

MINERAL COMPOSITION of RAW MATERIAL, SUBSTRATE and FRUITING BODIES of Pleurotus ostreatus IN CULTURE

In a culture of a Pleurotus ostreatus (oyster mushroom) strain, macro and micronutrients of the raw material and the initial and spent substrates were evaluated. Substrates were formulated with sawdust from Simarouba amara Aubl. and Ochroma piramidale Cav. ex. Lam., crushed Bactris gasipaes Kunth and crushed Saccharum officinarum (sugar cane). Samples were solubilized by means of acid digestion (nitric-peridrol). Ca, Mg, Fe, Cu, Zn and Mn were determined by atomic absorption spectrophotometry, Na and K by atomic emission, and P by colorimetry. The mineral composition of the fruiting body varied with the substrates, which made possible the production of a fruiting body rich in K, P Mg and Fe. Potassium was the mineral with the highest content in the fruiting body in all substrates tested (36.83-42.18g.kg(-1)). There was an increase of protein and mineral content in the spent substrate in relation to the initial one.

Qualidade tecnológica da cana-de-açúcar sob adubação com torta de filtro enriquecida com fosfato solúvel

The study had the objective to evaluate the effect of the fertilization with filter cake enriched with soluble phosphate on the sugar yield. The experiment carried at Presidente Prudente-SP, used a randomized complete block design, in the factorial scheme 5 x 4, where the first factor consisted of doses of filter cake (0; 0.5; 1.0; 2.0 and 4.0 t ha(-1)) and the second, doses of phosphorus fertilizer (0, 50, 100, 200 kg ha(-1) of P2O5), with 4 replicates, totaling 80 plots. The results indicated that phosphorus applied in planting furrows improves the quality of sugarcane raw matter by increasing the levels of soluble solids, total reducing sugars and sucrose in the stalks. The phosphorus also increases the productivity of sugar. The filter cake applied in planting furrow has the potential to partially replace the chemical fertilization with phosphate aiming to improve the quality and the productivity of sugar. The best combination was filter cake at dose between 2.6 and 2.7 t ha(-1) combined with dose between 160 and 190 kg P2O5 ha(-1) for obtaining best response of soluble solids and productivity of sugar.

Doses de potássio em cobertura na primeira soca da cultura da cana-de-açúcar cultivada no norte matogrossense

The sugar cane crop has been cultivated in all regions of the Brazil, occupying different soil types. The north region of Mato Grosso has favorable climate conditions for the culture, however, has been achieved low productivity due to the not application of fertilizer and inefficient doses. Being the potassium the mineral element absorbed in large amount by culture. Aimed to with this work to evaluate the effect of growing doses of the nutrient applied in coverage in the second cycle of the variety of sugar cane IAC86-2480. The experimental design was randomized blocks, with four replications. The Potassium doses were: 0; 60; 120; 180 e 240 kg ha(-1) of K(2)O. Was evaluated the degrees Brix, diameter, weigth, height and productivity of stalk. No was significant effects for the variable degrees Brix in response to potassium doses, since to others had response quadratic. The dose of maximum agronomic efficiency was of 150 kg ha(-1) de K(2)O obtaining productivity of 85 t ha(-1) of stalk, representing 25% increase in productivity.

Spatial variability of soil attributes and sugarcane yield in relation to topographic location

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Detection and localization of small nuclear ribonucleoproteins (snRNPs) in trypanosomatids using anti-m(3)G antibodies

This work reports for the first time the identification and immunolocalization, by confocal and conventional indirect immunofluorescence, of m(3)G epitopes present in ribonucleoproteins of the following trypanosomatids: Trypanosoma cruzi epimastigotes of three different strains, Blastocrithidia ssp., and Leishmania major promastigotes. The identity of these epitopes and hence the specificity of the anti-m(3)G monoclonal antibody were ascertained through competition reaction with 7-methylguanosine that blocks the Ig binding sites, abolishing the fluorescence in all the parasites tested and showing a specific perinuclear localization of the snRNPs, which suggests their nuclear reimport in the parasites. Using an immunoprecipitation technique, it was also possible to confirm the presence of the trimethylguanosine epitopes in trypanosomatids.

Viabilidade de crescimento micelial de Coprinus comatus em meio de cultura à base de resíduos orgânicos

The objective of this work was to evaluate the mycelial growth of the Coprinus comatus strain CCO 01/01 in culture based on organic residues of Saccharum officinarum (sugarcane bagasse), Citrus sinensis (orange bagasse), Ananas comosus (pineapple residues) and Musa sp. (banana leaf), supplemented with wheat bran in the proportions of 0, 10 and 20%, kept at 27 degrees C. The mycelial growth of C. comatus was evaluated daily by measurement of the diameter of the colony during seven days of incubation. The banana leaf was considered the best residue for the cultivation of the C. comatus even without supplementation, meaning lower production costs. The supplementation of pineapple residues with 10% of wheat bran favored fungi growth. Sugar-cane bagasse was suitable for the growth of the C. comatus provided it is enriched with wheat bran. The orange bagasse, without pH correction, was not appropriate for the mycelial growth of C. comatus.

Análise físico-química e composição nutricional da matéria prima e de substratos pré e pós cultivo de Pleurotus ostreatus

The aim of the present study was to carry out the physical, chemical and nutritional analyses of the alternative substrates formulated from wood and agroindustrial residues of the Amazon for Pleurotus ostreatus (Jacq.:Fr.) Kummer cultivation. The determination of C, N, pH, humidity, soluble solids, protein, fat, total fiber ash, carbohydrates (total and available) and energy were carried out. The substrates were formulated from sawdust of Simarouba amara Aubl. (marupa), Ochroma piramidale Cav. ex. Lam. (pau de balsa) and from the stein of Bactris gasipaes Kunth (pupunheira palm tree), and from Saccharum officinarum L. (sugar cane bagasse). The results demonstrated that the nutritional composition of the substrate is variable and the improvement of the quality of the spent substrate (energy and protein increment) promoted by the metabolism of the fungus during the cultivation, contributed for a more nutritive substrate than the initial one, which could be used as a compost for Agaricus sp. cultivation, as organic fertilizer and for bioremediation for contaminated soils.

Atividade da enzima redutase do nitrato e teores de prolina livre em raízes de cana-de-açúcar sob os estresses hídrico e ácido no solo

The aim of this work was evaluate the physiological indicators of association between water deficiency and soil acidity, by determining the nitrate reductase activity, the levels of free proline and initial growth of the root system of seedlings of sugarcane cv. IAC91-5155. After 30 days, the seedlings were transferred to plastic pots with 12 dm3 of dystrophic alic Red Latosol (Oxisol) and submitted to association of three treatments of water availability: no stress (70%), moderate stress (55%) and severe stress (40%), in according with field capacity and three acidity treatments: no stress (55%), moderate stress (33%) and severe stress (23%), considering the base saturation. The experimental design was that of random blocks under factorial scheme of 3x3, with four replicates. After 60 days under the stress association, the levels of free proline, the nitrate reductase activity and the growth of the sugarcane roots system were evaluated in seedlings of sugarcane. The nitrate reductase enzyme activity can be considered a physiological indicator of the effect of the association of acid and water stress in moderate conditions in soil, while the free proline can be considered physiological indicator to both stress in severe conditions. Water deficiency increasing reduced growth of sugarcane roots.

Caracterizacao edafo-climatica do Estado de Minas Gerais para a cultura da Cana-de-acucar

An ecological zoning originates seven regional units according to the main limitations to sugar cane culture. -from English summary

Effects of cumulative doses of vinasse on soil microorganisms in cerrado

Counts of colony forming units of actinomycetes, bacteria and filamentous fungi were determined in cerrado soil treated with vinasse (processed sugar cane effluent) for 5 yr, using doses of 20 l m-2a-1 and 50 l m-2a-1. A temporary increase in the counts of actinomycetes and bacteria for some months after the addition of vinasse was observed. An increased number of fungi was detected throughout the experiment together with qualitative changes in the population. The most abundant fungi in cerrado soil not treated with vinasse (control soil) were Chaetomium, yeasts, Mucor, Penicillium and Trichoderma, while in vinasse treated soils, the same genera adding Verticillium, with the exception of yeasts, were the most common fungi. -Author

Effect of soil moisture content and the irrigation frequency on the sugarcane germination

The aim of this work was to observe the interaction between soil moisture and irrigation time intervals on the germination of sugarcane cv. RB785148 sets in semi-controlled conditions. One-bud sets of the variety RB785148 were germinated in ceramic pots filled with soil under a transparent PVC cover using soil humidity levels of 22, 25 and 30%, that were restored at intervals of 7, 14 and 21 days. The experiment was carried out at three different periods of the year: May-June/94; Oct.-Nov./94; and Mar.-Apr./95. The results indicate that the germination decreased mainly in function of the decrease in soil humidity, whereas irrigation interval have no statistical effect on germination. An interaction between humidity level and irrigation interval was observed. A variation of the timecourse of the germination could be observed when the results of the experiments installed at different dates were compared.