A comparison of mucosal surface area and villous histology in small intestines of the brazilian free-tailed bat (Tadarida brasiliensis) and the mouse (Mus musculus)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

De novo transcriptome assembly for a non-model species, the blood-sucking bug Triatoma brasiliensis, a vector of Chagas disease

High throughput sequencing (HTS) provides new research opportunities for work on non-model organisms, such as differential expression studies between populations exposed to different environmental conditions. However, such transcriptomic studies first require the production of a reference assembly. The choice of sampling procedure, sequencing strategy and assembly workflow is crucial. To develop a reliable reference transcriptome for Triatoma brasiliensis, the major Chagas disease vector in Northeastern Brazil, different de novo assembly protocols were generated using various datasets and software. Both 454 and Illumina sequencing technologies were applied on RNA extracted from antennae and mouthparts from single or pooled individuals. The 454 library yielded 278 Mb. Fifteen Illumina libraries were constructed and yielded nearly 360 million RNA-seq single reads and 46 million RNA-seq paired-end reads for nearly 45 Gb. For the 454 reads, we used three assemblers, Newbler, CAP3 and/or MIRA and for the Illumina reads, the Trinity assembler. Ten assembly workflows were compared using these programs separately or in combination. To compare the assemblies obtained, quantitative and qualitative criteria were used, including contig length, N50, contig number and the percentage of chimeric contigs. Completeness of the assemblies was estimated using the CEGMA pipeline. The best assembly (57,657 contigs, completeness of 80 %, < 1 % chimeric contigs) was a hybrid assembly leading to recommend the use of (1) a single individual with large representation of biological tissues, (2) merging both long reads and short paired-end Illumina reads, (3) several assemblers in order to combine the specific advantages of each.

Interspecific interactions involving Neoseiulus californicus (Acari: Phytoseiidae) and Agistemus brasiliensis (Acari: Stigmaeidae) as predators of Brevipalpus phoenicis (Acari: Tenuipalpidae)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Alterações na estabilidade de agregados de latossolo e argissolo em função do manejo, na entrelinha da seringueira (Hevea brasiliensis)

A trial was carried out with the purpose of evaluating the effect of different management systems applied between the rows of rubber trees (Hevea brasiliensis) on the aggregate stability in water of Dark Red Latosol, with clayey texture from the Municipality of Jaboticabal (SP) and Yellow Red Podzolic, sandy/medium texture fromthe Municipality of Tabapua (SP). The treatments consisted of disk harrowing, Pueraria phaseoloides and mowing. The soil samples were withdrawn after seven years of application of these management systems from depths of 0-0.1, 0.1-0.2, 0.2-0.3, and 0.3-0.4 m. The stability of the aggregates was obtained in sieves with size classes of 8-4, 4-2, 2-1, 1-0.5, 0.5-0.125, and < 0.125 mm. The Pueraria phaseoloides gave a significant difference regarding the distribution of the aggregates on the superficial layer (10 cm) when compared to the other management systems, presenting a higher distribution of larger sized aggregates on the Dark Red Latosol. The tillage management for this same depth presented higher values of small sized aggregates on both soils. The organic matter on the soils showed a direct and significant relation to the stability of the larger sized aggregates and an inverse relation with the stability of the smaller sized aggregates.

Alterations of protein expression in conditions of copper-deprivation for Paracoccidioides lutzii in the presence of extracellular matrix components

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

The multifaceted roles of metabolic enzymes in the Paracoccidioides species complex

Paracoccidioides species are dimorphic fungi and are the etiologic agents of paracoccidioidomycosis, which is a serious disease that involves multiple organs. The many tissues colonized by this fungus suggest a variety of surface molecules involved in adhesion. A surprising finding is that most enzymes in the glycolytic pathway, tricarboxylic acid (TCA) cycle and glyoxylate cycle in Paracoccidioides spp. have adhesive properties that aid in interacting with the host extracellular matrix and thus act as 'moonlighting'proteins. Moonlighting proteins have multiple functions, which adds a dimension to cellular complexity and benefit cells in several ways. This phenomenon occurs in both eukaryotes and prokaryotes. For example, moonlighting proteins from the glycolytic pathway or TCA cycle can play a role in bacterial pathogenesis by either acting as proteins secreted in a conventional pathway and/or as cell surface components that facilitate adhesion or adherence. This review outlines the multifunctionality exhibited by many Paracoccidioides spp. enzymes, including aconitase, aldolase, glyceraldehyde-3-phosphate dehydrogenase, isocitratelyase, malatesynthase, triose phosphate isomerase, fumarase, and enolase. We discuss the roles that moonlighting activities play in the virulence characteristics of this fungus and several other human pathogens during their interactions with the host.

Extrafloral nectary morphology and the role of environmental constraints in shaping its traits in a common Cerrado shrub (Maprounea brasiliensis A. St.-Hill: Euphorbiaceae)

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Radiographic characterization of the bone healing process after protein application extracted from hevea brasiliensis

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Diversidade e sazonalidade de ácaros (Acari) em seringal (Hevea brasiliensis, Muell. Arg.) no Noroeste do Estado de São Paulo

Brazilian southeastern region has soil and climate conditions suitable for the growing of rubber trees, and most part of national yield arises from São Paulo State. The aims proposed for this work were to determine the diversity, the richness and the seasonal occurrence of mites found in a rubber tree crop in a triennial survey with monthly samplings, as well as to estimate the populational density of the major phytophagous species. This study found 74,407 mites from 26 species belonging to 10 families. The phytophagous and predators represented 95.4% and 3.9% of the total abundance, respectively. Twelve species were rare, six accessories and eight constant. The families Phytoseiidae and Tydeidae had the greatest richness (five and four species, respectively). The most numerous species was Calacarus heveae Feres (50,573), with great abundance at the end of rainy season until the beginning of dry season. Among predators, the most abundant were Zetzellia quasagistemas Hernandes & Feres (1,345), Pronematus sp. (455), Zetzellia agistzellia Hernandes & Feres (409) and Euseius citrifolius Denmark & Muma (243). C. heveae had greatest densities on March and April 2003, and Lorryia formosa Cooreman and Tenuipalpus heveae Baker on March and May 2001, respectively. Many stigmaeids were observed in association with colonies of L. formosa preying their eggs and immatures.

Ants (Hymenoptera: Formicidae) in vineyards that are infested or uninfested with Eurhizococcus brasiliensis (Hemiptera: Margarodidae) in Southeastern Brazil

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Redox-active biflavonoids from Garcinia brasiliensis as inhibitors of neutrophil oxidative burst and human erythrocyte membrane damage

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Notes on the reproductive biology of the Brazilian electric ray Narcine brasiliensis (Elasmobranchii: Narcinidae)

This study provides information on the reproductive biology of Narcine brasiliensis based on 105 individuals (72 females and 33 males) sampled in São Paulo State, Brazil. The total length at maturity for females was 318·9 mm and for males was 279·8 mm; pregnant females were observed only during summer and autumn. The peak of the gonado-somatic index for females and condition factor for males in the spring suggest a preparation for pregnancy and a mating period during this season. The capture of immature individuals indicates a need for management of the species in this region.

Estudo morfológico, morfométrico e molecular de espécies do complexo Triatoma brasiliensis (Hemiptera, Reduviidae, Triatominae)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Diversidade e sazonalidade de ácaros (Acari) em seringal (Hevea brasiliensis, Muell. Arg.) no Noroeste do Estado de São Paulo

A Região Sudeste do Brasil apresenta aspectos edafo-climáticos favoráveis para o plantio e desenvolvimento da seringueira, sendo o estado de São Paulo o maior produtor nacional de látex. Este trabalho teve como objetivos determinar, através de coletas mensais durante três anos de estudo, a diversidade, a riqueza de espécies e a sua sazonalidade, bem como realizar estimativas de densidade populacional das principais espécies de ácaros presentes nas folhas. Todos os ácaros foram montados em lâminas de microscopia, totalizando 74.407 indivíduos, de 26 espécies pertencentes a 10 famílias. Os fitófagos representaram 95,4% do total de indivíduos coletados e os predadores 3,9%. Doze espécies foram consideradas acidentais, seis foram acessórias e oito constantes. Apresentaram maior número de espécies as famílias Phytoseiidae (cinco) e Tydeidae (quatro). A espécie mais abundante foi Calacarus heveae Feres (50.573), com maior abundância nos meses correspondentes ao término da estação chuvosa e início da estação seca na região. Dentre os predadores, a mais abundante foi Zetzellia quasagistemas Hernandes & Feres (1.345), seguida por Pronematus sp. (455), Zetzellia agistzellia Hernandes & Feres (409) e Euseius citrifolius Denmark & Muma (243). C. heveae apresentou maior densidade populacional em março e abril de 2003, e Lorryia formosa Cooreman e Tenuipalpus heveae Baker em março e maio de 2001, respectivamente. Muitos estigmeídeos foram observados associados a agrupamentos de L. formosa predando seus ovos e estágios imaturos.

Prevulcanização do látex natural extraído da hancornia speciosa gomes (Mangabeira) e da hevea brasiliensis (seringueira)

Pós-graduação em Ciência dos Materiais - FEIS