Phylogeny and biogeography of the Petaurista philippensis complex (Rodentia : Sciuridae), inter- and intraspecific relationships inferred from molecular and morphometric analysis

With modified DNA extraction and Purification protocols, the complete cytochrome b gene sequences (1140 bp) were determined from degraded museum specimens. Molecular analysis and morphological examination of cranial characteristics of the giant flying squirrels of Petaurista philippensis complex (P. grandis, P. hainana, and P. yunanensis) and other Petaurista species yielded new insights into long-standing controversies in the Petaurista systematics. Patterns of genetic variations and morphological differences observed in this study indicate that P. hainana, P. albiventer, and P. yunanensis can be recognized as distinct species, and P. grandis and P. petaurista are conspecific populations. Phylogenetic relationships reconstructed by using parsimony, likelihood, and Bayesian methods reveal that, with P. leucogenys as the basal branch, all Petaurista groups formed two distinct clades. Petaurista philippensis, P. hainana, P. yunanensis, and P. albiventer are clustered in the same clade, while P. grandis shows a close relationship to P. petaurista. Deduced divergence times based on Bayesian analysis and the transversional substitution at the third codon suggest that the retreating of glaciers and upheavals or movements of tectonic plates in the Pliocene-Pleistocene were the major factors responsible for the present geographical distributions of Petaurista groups. (c) 2005 Elsevier Inc. All rights reserved.

Phylogenetic relationships of the Chinese brown frogs (Genus rana) inferred from partial mitochondrial 12S and 16S rRNA gene sequences

Based on partial sequences of the 12S and 16S ribosomal RNA genes, we estimated phylogenetic relationships among brown frogs of the Rana temporaria group from China. From the phylogenetic trees obtained, we propose to include Rana zhengi in the brown frog

Ribosomal DNA gene and phylogenetic relationships of Diplura and lower Hexapods

The monophyly of Diplura and its phylogenetic relationship with other hexapods are important for understanding the phylogeny of Hexapoda. The complete 18SrRNA gene and partial 28SrRNA gene (D3-D5 region) from 2 dipluran species (Campodeidae and Japygidae), 2 proturan species, 3 collembolan species, and 1 locust species were sequenced. Combining related sequences in GenBank, phylogenetic trees of Hexapoda were constructed by MP method using a crustacean Artemia salina as an outgroup. The results indicated that: (i) the integrated data of 18SrDNA and 28SrDNA could provide better phylogenetic information, which well supported the monophyly of Diplura; (ii) Diplura had a close phylogenetic relationship to Protura with high bootstrap support.

Successful inoculation of Artemia and production of cysts in man-made salterns in the Philippines

The authors report on inoculation experiments of Artemia nauplii and young adults of the San Francisco Bay strains in earthen fish ponds. The test inoculated proved successful where water salinity ranges from 20 to 32 o/oo during the start of the rainy season in the Philippines.

Phylogenetic relationships in genus Niviventer (Rodentia : Muridae) in China inferred from complete mitochondrial cytochrome b gene

Chinese species of the genus Niviventer, predominantly distributed in the southeastern Tibetan Plateau and in Taiwan, are a diverse group and have not yet received a thorough molecular phylogenetic analysis. Here, we reconstructed the phylogenetic relatio

Relationships between secchi disk visibility, water temperature and dissolved oxygen in freshwater fishpond

A study was conducted to determine the relationships between secchi disk variability, water temperature and dissolved oxygen in fish ponds. Multiple regression correlation analysis was done to evaluate the relationships between the variables. Results indicated that the ranges of secchi disk visibility, water temperature and dissolved oxygen in the study ponds were just within the ranges of the variables for tilapia culture. Multiple regression correlation showed no (or insignificant) relationships with dissolved oxygen and water temperature, dissolved oxygen with secchi disk visibility and water temperature with secchi disk visibility.

Effects of supplemental feed and fertilizer on growth and survival of Macrobrachium rosenbergii (de Man) post larvae in pond nursery system

The study was conducted to compare the performance of different nursing practices of giant freshwater prawn (Macrobrachium rosenbergii) post-larvae (PL). Three treatments such as only fertilizers (T1), fertilizers with 5% supplementary feed (local feed) (T2), and 10% commercial feed (T3) were applied in the nursing system of prawn PLs in earthen pond. An earthen pond (315m²) was divided into nine equal small ponds by fine meshed nylon nets. Feeds were used once daily on a tray placed near the pond bottom. There was a significant difference (p<0.05) in some water quality parameters like pH and total alkalinity, but all measured water quality parameters viz. water temperature, transparency, dissolved oxygen and ammonia-nitrogen were within the acceptable range for nursing of prawn PL. The results showed that the mean final lengths of prawn post-larvae were 6.3±0.07 cm, 7.12±0.22 cm and 8.17±0.16 cm in T1, T2 and T3, respectively. There were significant difference (p<0.05) in mean final length of prawn PL among the treatments. Significantly higher (p<0.05) average daily weight gain was observed in T3 (0.071 ±0.007 g) than in T2 (0.052±0.006 g) and T1 (0.031 ±0.002 g). The specific growth rate (SGR) of T3 (8.81±0.26) was found significantly higher (p<0.05) than T2 (8.35±0.22) and T1 (7.42±0.11). Survival rate (%) was also significantly higher (p<0.05) in T3 (66.24±1.58) than in T2 (60.52±1.64) and T1 (53.86±2.71). Therefore, it may be concluded that the growth and survival in prawn nursery was better in commercial feed than only fertilizers and fertilizers with local feeds.

Microbiological quality study of Macrobrachium rosenbergii (de Man 1879) during storage at -20°C temperature

The shelf life of fresh water prawn Macrobrachium rosenbergii by applying low temperature was investigated. M. rosenbergii preserved at -20°C was subjected for quality assessment before storage and at 15, 30, 45, and 90 days of storage period. The quality assessments as done microbiological viz. total bacterial count (TBC), total mould count (TMC), total yeast count (TYC), total coliform count (TCC) and salmonella count. All the samples were acceptable during 90 days because the upper limit of all spoilage indicator was not exceeding within the experimental time period.

Study morphologic, phylogenic relationships DNA barcoding of of identified decapod group (Crustacean) of Persian Gulf and Oman Sea.

Phylogenetic relationships among all described species (total of 12 taxa) of the decapoda, were examined with nucleotide sequence data from portions of mitochondrial gene and cytochrome oxidase subunit I (COI). The previous works on phylogeny proved that the mitochondrial COI gene in crustacean is a good discriminative marker at both inter- and intra-specific levels. We provide COI barcode sequences of commertial decapoda of Oman Sea, Persian Gulf, Iran. Industrial activities, ecologic considerations, and goals of the decapoda Barcode of Life campaign make it crucial that species of the south costal be identified. The reconstruction of evolut phylogeny of these species are crucial for revealing stock identity that can be used for the management of fisheries industries in Iran. Mitochondrial DNA sequences were used to reconstruct the phylogeny of the Penaeus species of marine shrimp. For this purpose, DNA was extracted using phenol- chloroform well as CTAB method. The evolutionary relationships among 12 species of the decapoda were examined using 610 bp of mitochondrial (mt) DNA from the cytochrome oxidase subunit I gene. Finally the cladograms were compared and the resulted phylogenetic trees confirmed that the Iran's species origin is Indo-west pacific species. Iran's species, which were not grouped with the other decapoda taxa seem to always form a sister clade with Indo-west pacific species with strong bootstrap support 100%. The result completely agrees with the previously defined species using morphological characters.However, we still lack any comprehensive and clear understanding of phylogenetic relationships in this group.

Learning large-scale spatial relationships in a maze and effects of MK-801 on retrieval in the rhesus monkey

Monkeys have strong abilities to remember the visual properties of potential food sources for survival in the nature. The present study demonstrated the first observations of rhesus monkeys learning to solve complex spatial mazes in which routes were guid

Morphometric relationships of spineless cuttlefish, Sepiella inermis (Orbigny, 1848) from Mumbai waters

The relationships of various morphometric characters with dorsal mantle length (DML) of Sepiella inermis from Mumbai waters was established. The coefficient of correlation (r²) for various morphometric characters against dorsal mantle length ranged from 0.747 to 0.942 indicating high degree of relationship among the characters compared. The regression of characteristics obtained by least squares method for S. inermis indicates that the characters have positive allometric growth.

Phylogenetic relationships of the mustache toads inferred from mtDNA sequences

Species of the genus Vibrissaphora are unique among all annurans in that males exhibit external cornified spines in the maxillary region during the breeding season. They were separated from species of the genus Leptobrachium based on this unique character. We construct a phylogeny using the 16S, ND4, and cytochrome b mitochondrial genes of 42 individuals from eight species of Vibrissaphora and five species of Leptobrachium from mainland China, Southeast Asia, and Hainan Island. Species of both Oreolalax and Scutiger were used as outgroups. The results indicate that: L. huashen and L. chapaense form a clade that is nested within Vibrissaphora, and L. hainanense is the sister taxon to the clade comprising all Vibrissaphora plus L. chapaense and L. huashen; V. boringiae is grouped with a clade consisting of V. leishanensis, V. liui, and V. yaoshanensis; and V. yaoshanensis is a species separate from V. liui. We propsed taxonomix changes that reflect these findings. Also based on the resulting phylogenetic trees, we propose that the mustache toads originated in the trans-Himalayan region of southwest China, and that the evolution of maxillary spines, large body size, and reverse sexual size dimorphism in these frogs was influenced by intrasexual selection due to adopting a resource-defense polygyny matting system.

Phylogenetic relationships among Rhacophorinae (Rhacophoridae, Anura, Amphibia), with an emphasis on the Chinese species

The partial nucleotide sequence of mitochondrial 12S and 16S rRNA genes was determined for 23 Chinese species of Rhaeophoridae (Amphibia: Anura), representing four of the eight recognized genera. Using Buergeriinae as the outgroup, phylogenetic analyses (

XDistribution and Length2weight Relationships of Glyptosternoid Fishes in the Drung River Basin , Yunnan

鱼类主要分布于青藏高原周边, 是一群适合于急流生活的　科鱼类。在独龙江流域7 个点共采 集271 号　　鱼类标本(隶属　属、　属和异齿　属) , 结合各采集点数据绘制大鳍异齿　、藏　和扁头　的分布 直方图, 结果显示, 藏　( E. labiatum) 在流速较快的独龙江下游各采集点的种群数量较上游高, 更适应急流生 境。同时研究了这3 种　　鱼类的体长与体重的关系, 参数b (W = aLb) 的范围在218201 和310131 之间, 均为异 速生长; 藏　的生长类型最接近等速生长。