Examining the Effectiveness of Discriminant Function Analysis and Cluster Analysis in Species Identification of Male Field Crickets Based on Their Calling Songs

Traditional taxonomy based on morphology has often failed in accurate species identification owing to the occurrence of cryptic species, which are reproductively isolated but morphologically identical. Molecular data have thus been used to complement morphology in species identification. The sexual advertisement calls in several groups of acoustically communicating animals are species-specific and can thus complement molecular data as non-invasive tools for identification. Several statistical tools and automated identifier algorithms have been used to investigate the efficiency of acoustic signals in species identification. Despite a plethora of such methods, there is a general lack of knowledge regarding the appropriate usage of these methods in specific taxa. In this study, we investigated the performance of two commonly used statistical methods, discriminant function analysis (DFA) and cluster analysis, in identification and classification based on acoustic signals of field cricket species belonging to the subfamily Gryllinae. Using a comparative approach we evaluated the optimal number of species and calling song characteristics for both the methods that lead to most accurate classification and identification. The accuracy of classification using DFA was high and was not affected by the number of taxa used. However, a constraint in using discriminant function analysis is the need for a priori classification of songs. Accuracy of classification using cluster analysis, which does not require a priori knowledge, was maximum for 6-7 taxa and decreased significantly when more than ten taxa were analysed together. We also investigated the efficacy of two novel derived acoustic features in improving the accuracy of identification. Our results show that DFA is a reliable statistical tool for species identification using acoustic signals. Our results also show that cluster analysis of acoustic signals in crickets works effectively for species classification and identification.

Molecules support morphology: species status of South Indian populations of the widely distributed Hanuman langur

The taxonomy of the Hanuman langur (Semnopithecus spp.), a widely distributed Asian colobine monkey, has been in a flux for a long time due to much disagreement between various classification schemes. However, results from a recent field-based morphological study were consistent with Hill's (Ceylon J Sci 21:277-305, 1939) species level classification scheme. Here we tested the validity of S. hypoleucos and S. priam, the two South Indian species recognized by Hill. To this end, one mitochondrial and four nuclear markers were sequenced from over 72 non-invasive samples of Hanuman langurs and S. johnii collected from across India. The molecular data were subjected to various tree building methods. The nuclear data was also used in a Bayesian structure analysis and to determine the genealogical sorting index of each hypothesized species. Results from nuclear data suggest that the South Indian population of Hanuman langur consists of two units that correspond to the species recognized by Hill. However in the mitochondrial tree S. johnii and S. priam were polyphyletic probably due to retention of ancestral polymorphism and/or low levels of hybridization. Implications of these results on conservation of Hanuman langurs are also discussed.

Effects of Withania somnifera and Tinospora cordifolia Extracts on the Side Population Phenotype of Human Epithelial Cancer Cells: Toward Targeting Multidrug Resistance in Cancer

Recent reports suggest the existence of a subpopulation of stem-like cancer cells, termed as cancer stem cells (CSCs), which bear functional and phenotypic resemblance with the adult, tissue-resident stem cells. Side population (SP) assay based on differential efflux of Hoechst 33342 has been effectively used for the isolation of CSCs. The drug resistance properties of SP cells are typically due to the increased expression of ABC transporters leading to drug efflux. Conventionally used chemotherapeutic drugs may often leads to an enrichment of SP, revealing their inability to target the drug-resistant SP and CSCs. Thus, identification of agents that can reduce the SP phenotype is currently in vogue in cancer therapeutics. Withania somnifera (WS) and Tinospora cordifolia (TC) have been used in Ayurveda for treating various diseases, including cancer. In the current study, we have investigated the effects of ethanolic (ET) extracts of WS and TC on the cancer SP phenotype. Interestingly, we found significant decrease in SP on treatment with TC-ET, but not with WS-ET. The SP-inhibitory TC-ET was further fractionated into petroleum ether (TC-PET), dichloromethane (TC-DCM), and n-butyl alcohol (TC-nBT) fractions using bioactivity-guided fractionation. Our data revealed that TC-PET and TC-DCM, but not TC-nBT, significantly inhibited SP in a dose-dependent manner. Furthermore, flow cytometry-based functional assays revealed that TC-PET and TC-DCM significantly inhibited ABC-B1 and ABC-G2 transporters and sensitized cancer cells toward chemotherapeutic drug-mediated cytotoxicity. Thus, the TC-PET and TC-DCM may harbor phytochemicals with the potential to reverse the drug-resistant phenotype, thus improving the efficacy of cancer chemotherapy.

Systematic status of Fejervarya ((Amphibia, Anura, Dicroglossidae) from South and SE Asia with the description of a new species from the Western Ghats of Peninsular India

We carried out a large-scale phylogenetic analysis of fejervaryan (dicroglossid frogs with `Fejervaryan lines' on the ventral side of the body) frogs, distributed in South and SE Asia, using published and newly generated sequences of unidentified individuals from the northern Western Ghats. The results corroborate the presence of a larger fejervaryan clade with a sister relationship to a clade composed of Sphaerotheca. Two sister clades could be discerned within the lager fejervaryan clade. The unidentified individuals formed a monophyletic group and showed a strong support for a sister relationship with Minervarya sahyadris. The species was found to be highly divergent (16S rRNA-4% and tyr-1%) from its sister lineage Minervarya sahyadris, and the clade composed of these two lineages were found to be deeply nested within the larger clade of Fejervarya. Based on this, the genus Minervarya Dubois, Ohler and Biju, 2001 is synonymized under the genus Fejervarya Bolkay, 1915. The unidentified lineage is recognized, based on phylogenetic position, genetic divergence and morphological divergence, as a distinct species and named here as Fejervarya gomantaki sp. nov. The presence of rictal glands was observed to be a synapomorphic character shared by the nested clade members, Fejervarya sahyadris and Fejervarya gomantaki sp. nov. Based on the presence of rictal gland and small size, Minervarya chilapata, a species from a lowland region in the Eastern Himalayas, is synonymized under Fejervarya and evidence for morphological separation from the new species, Fejervarya gomantaki sp. nov. is provided. For the fejervaryan frogs, currently three generic names (Frost, 2015) are available for the two phylogenetic subclades; the genus Fejervarya Bolkay, 1915 for the species of fejervaryan frogs having distribution in the South East Asia; the genus Zakerana Howlader, 2011 for the species of fejervaryan frogs having distribution in the South Asia and the genus Minervarya Dubois, Ohler and Biju, 2001 nested within the `Zakerana clade'. In the phylogenetic analysis Minervarya sahyadris, the new species described herein as Fejervarya gomantaki sp. nov. are nested within the `Zakerana clade', if the `Zakerana clade' for the fejervaryan frogs having distribution in the South Asia is provided a generic status the nomen `Minervarya' should be considered as per the principle of priority of the ICZN Code. Taking into consideration the overlapping distribution ranges of members of the sister clades within the larger fejervaryan clade and the absence of distinct morphological characteristics, we also synonymize the genus Zakerana Howlader, 2011, a name assigned to one of the sister clades with members predominantly distributed in South Asia, under the genus Fejervarya Bolkay, 1915. We discuss the need for additional sampling to identify additional taxa and determine the geographical ranges of the members of the sister clades within Fejervarya to resolve taxonomy within this group.

Innovative capabilities, entrepreneurial process and the dynamic growth of university spin-outs: A process-oriented study with evidence from China

This research aims to develop a conceptual framework in order to enquire into the dynamic growth process of University Spin-outs (hereafter referred to as USOs) in China, attempting to understand the capabilities configuration that are necessary for the dynamic growth. Based on the extant literature and empirical cases, this study attempts to address the question how do USOs in China build and configure the innovative capabilities to cope with the dynamic growth. This paper aims to contribute to the existing literature by providing a theoretical discussion of the USOs' dynamic entrepreneurial process, by investigating the interconnections between innovation problem-solving and the required configuration of innovative capabilities in four growth phases. Further, it presents a particular interest on the impact to the USOs' entrepreneurial innovation process by the integrative capabilities, in terms of knowledge integration, alliance, venture finance and venture governance. To date, studies that have investigated the dynamic development process of USOs in China and have recognized the heterogeneity of USOs in terms of capabilities that are required for rapid growth still remain sparse. Addressing this research gap will be of great interest to entrepreneurs, policy makers, and venture investors. ©2009 IEEE.

Cien años de la Facultad de Teología : la progresiva maduración de un estilo

Resumen: En su lectio inauguralis del año académico de la Facultad de Teología de la Universidad Católica Argentina, el autor toma la oportunidad de la celebración del Centenario de dicha Facultad y los cincuenta años de la clausura del Concilio Vaticano II, para reflexionar sobre la influencia de este último en el “estilo” de aquélla. Este estilo es, en efecto, fruto de la recepción del Concilio, que ha hecho prevalecer el tema del amor en el pensamiento y la vida cristiana, junto con una visión de la revelación como comunicación de Dios a los hombres en la historia, y una nueva atención a los “signos de los tiempos”, generando así una nueva actitud caracterizada por la apertura y el diálogo. El “estilo integrador” de nuestra Facultad, inspirado en el Concilio y en la figura de Pablo VI, encuentra un renovado impulso en el Papa Francisco, para quien la “auténtica” teología debe ser hecha “de rodillas” y desde el “corazón”, siendo a la vez saber humilde y amor comprometido

Aportes teóricos de la psicología cognitiva para la construcción de una nueva economía científica

Resumen: El presente ensayo teórico se orienta a revisar las concepciones de sujeto de uno de los sistemas teóricos de economía-política que han tenido mayor influencia hasta el presente. El padre del liberalismo (Adam Smith) sustentó una teoría de sujeto cartesiano (moderno), es decir, un verdadero sapiens sapiens racional y autoconsciente. A través de la psicología cognitiva, los Premios Nobel en economía Kanheman y Tversky presentan una nueva variante de homoeconomicus, enriquecida con aportes de la ciencia experimental, modificando sustancialmente aquella vieja concepción de hombre como ser racional que signó casi todo el pensamiento moderno. Dadas estas “recientes revisiones” teórico-metodológicas, gestadas a la luz de la denominada ciencia de la mente, es que se hace indispensable re-pensar las viejas nociones de sujeto que sirvieron de cimiento al sistema económico y político, antes citadas. Para tal fin, se propone efectuar una sinergia teórico-metodológica entre dos disciplinas científicas: la economía y la psicología. Dicho sincretismo podría proporcionar las bases para una nueva disciplina científica integradora, que muchos teóricos ya han denominado neuro-economía. Es por esto que en el presente trabajo se propone realizar una crítica fundamentada de una de las teorías económicas vigentes, haciendo principal hincapié en los supuestos psicológicos y antropológicos. Finalmente, se intenta re-pensar un nuevo modelo de homoeconomicus, articulando los principales supuestos de la economía actual con algunos de los aportes de la psicología cognitiva, la biología y las neurociencias cognitivas, que redunde en un nuevo paradigma integrador denominado psiconeuro- economía.

Sistema de informação em gestão de competências : proposta de um modelo de mapa do conhecimento aplicado à Câmara Legislativa do Distrito Federal

Apresenta a proposta de um modelo de mapa do conhecimento, como ferramenta informacional em gestão de competências, aplicado à Câmara Legislativa do Distrito Federal - CLDF, para auxiliar no processo de governança legislativa. São abordados e discutidos os conceitos de administração pública gerencial; competência; competência nas organizações e alguns modelos, métodos e técnicas de gestão de competências. Apresenta, ainda, o mapeamento das áreas de competência existentes na CLDF, e a modelagem e classificação das competências por áreas. O modelo proposto envolveu a construção de um modelo de dados; de uma taxonomia institucional; de uma arquitetura da informação, com concepção do padrão institucional de metadados, do repositório da taxonomia e dos metadados; e a definição das unidades organizacionais responsáveis pelo gerenciamento do conteúdo e da operacionalização do sistema, com suas atribuições e responsabilidades. Por fim, recomenda a aplicação do modelo e a ampliação do estudo em instituições públicas e, particularmente, nas instituições do poder legislativo municipal, estadual e federal.

PICES Press, Vol. 14, No. 2, July 2006

The 2006 inter-sessional Science Board and Governing Council meeting: A note from the Chairman (pdf, 0.1 Mb) Future Integrative Science Program – Progress report (pdf, 0.2 Mb) Big-picture synthesis requires understanding the small and "in-between" stuff - A summary of the CCCC Synthesis Symposium (pdf, 0.4 Mb) PICES Calendar (pdf, 0.4 Mb) Integration of ecological indicators for the North Pacific with emphasis on the Bering Sea (pdf, 0.2 Mb) Time series of the Northeast Pacific: A symposium to mark the 50th anniversary of Line-P (pdf, 0.1 Mb) PICES hosts an ESSAS workshop in St. Petersberg, Russia (pdf, 0.2 Mb) Professor Mikhail N. Koshlyakov (pdf, 0.5 Mb) The state of the western North Pacific in the second half of 2005 (pdf, 0.8 Mb) Recent trends in waters of the subarctic NE Pacific (pdf, 0.2 Mb) Unusual invertebrates and fish observed in the Gulf of Alaska, 2004-2005 (pdf, 0.1 Mb) The Bering Sea: Current status and recent events (pdf, 0.2 Mb) The Year of the Euphausiid (pdf, 0.01 Mb) Michio J. Kishi awarded 2005 Uda Prize by the Japan Society of Fisheries Oceanography (pdf, 0.03 Mb)

Harmful algal blooms in the PICES region of the North Pacific

Foreword Background and objectives [pdf, 0.84 MB] Country reviews and status reports Section I. Western North Pacific Japan Yasuwo Fukuyo, Ichiro Imai, Masaaki Kodama and Kyoichi Tamai Red tides and harmful algal blooms in Japan [pdf, 0.7 MB] People's Republic of China Tian Yan, Ming-Jiang Zhou and Jing-Zhong Zou A national report of HABs in China [pdf, 0.24 MB] Republic of Korea Sam Geun Lee, Hak Gyoon Kim, Eon Seob Cho and Chang Kyu Lee Harmful algal blooms (red tides): Management and mitigation in Korea [pdf, 0.27 MB] Russia Tatiana Y. Orlova, Galina V. Konovalova, Inna V. Stonik, Tatiana V. Morozova and Olga G. Shevchenko Harmful algal blooms on the eastern coast of Russia [pdf, 1.4 MB] Section II. Eastern North Pacific Canada F.J.R. "Max" Taylor and Paul J. Harrison Harmful marine algal blooms in western Canada [pdf, 0.87 MB] United States of America Vera L. Trainer Harmful algal blooms on the U.S. west coast [pdf, 0.5 MB] Mexico Jose L. Ochoa, S. Lluch-Cota, B.O. Arredondo-Vega, E. Nuñes-Vázquez, A. Heredia-Tapia, J. Pérez-Linares and R. Alonso-Rodriguez Marine Biotoxins and harmful algal blooms in Mexico's Pacific littora [pdf, 0.2 MB] Summary and conclusions [pdf, 0.6 MB] Appendices A. Members of the Working Group [pdf, 0.1 MB] B. Original terms of reference (Vladivostok, 1999) [pdf, 0.08 MB] C. Annual reports of WG 15 [pdf, 0.15 MB] D. Workshop report on taxonomy and identification of HAB species and data management [pdf, 0.15 MB] (Document pdf contains 156 pages)

A documentação de Paul Otlet : uma proposta para a organização racional da produção intelectual do homem

A pesquisa procura identificar e analisar as circunstâncias e motivações teóricas que levaram ao surgimento, no final do século XIX, da área de estudo denominada Documentação. Apresenta informações biográficas sobre os principais artífices deste projeto, os advogados e bibliógrafos belgas, Paul Otlet e Henri La Fontaine, que visaram ampliar a compreensão sobre o meio social e cultural em que atuaram. Procura ampliar a discussão sobre os fatores que motivaram em 1895 a proposta de organização racional de toda a produção intelectual do homem. Apresenta em linhas gerais a visão abrangente e integradora da Documentação que eliminando barreiras físicas, acessava acervos arquivísticos, bibliográficos e museológicos para o registro integral dos assuntos pesquisados. Discute a utilização da Classificação Decimal de Dewey (CDD) na criação do Repertório Bibliográfico Universal e analisa o processo que levou ao surgimento da Classificação Decimal Universal (CDU). Conclui sugerindo a inclusão desta visão extensiva e integradora da documentação ao referencial teórico da Ciência da Informação. Sugere que o resgate deste aporte teórico poderá contribuir para um melhor enfrentamento dos problemas da gestão do conhecimento registrado, produzido e acumulado até os dias atuais, nos mais diversos formatos, suportes e repositórios.

A guide to the Thalassinidea (Crustacea: Malacostraca: Decapoda) of the South Atlantic Bight

Ghost shrimp and mud shrimp in the decapod infraorder Thalassinidea are ecologically important members of many benthic intertidal and shallow subtidal infaunal communities, largely due to the sediment filtration and mixing that result from their burrowing and feeding behavior. These activities considerably modify their immediate environment and have made these cryptic animals extremely interesting to scientists in terms of their behavior, ecology, and classification. Over 20 years ago, seven species of thalassinideans were known from the South Atlantic Bight (Cape Hatteras, NC to Cape Canaveral, FL). During this study, the examination of extensive collections from the National Museum of Natural History (NMNH), the Southeastern Regional Taxonomic Center (SERTC), and regional institutions, resulted in the identification of 14 species of thalassinideans currently known to occur within this region. The family Axiidae is represented by three species: Axius armatus, Calaxius jenneri, and Paraxiopsis gracilimana; the Callianassidae by six: Biffarius biformis, B. cf. fragilis, Callichirus major, Cheramus marginatus, Gilvossius setimanus, and Necallianassa berylae; the Calocarididae by two: Calocaris templemani and Acanthaxius hirsutimanus; and the families Laomediidae, Thomassiniidae, and Upogebiidae are each represented by one: Naushonia crangonoides, Crosniera wennerae, and Upogebia affinis, respectively. An illustrated key is presented for species level identification and supplemental notes on the ecology, distribution, and taxonomy of the species are provided.(PDF file contains 38 pages.)

Uso de células iPS en terapia regenerativa renal: obtención de células iPS mediante vector no integrativo y diferenciación hacia podocitos.

[ES]En las sociedades modernas existe una creciente preocupación por el aumento de la incidencia de la enfermedad renal crónica. Debido a la deficiencia de donantes de órganos y al elevado coste del tratamiento de diálisis, existe la necesidad de desarrollar nuevos tratamientos para estos pacientes. La medicina regenerativa basada en la aplicación de células iPS es una opción prometedora para el tratamiento de esta enfermedad. Sin embargo, la falta de conocimientos sobre el estado pluripotencial de las células y sobre su proceso de diferenciación, así como las limitaciones derivadas del propio procedimiento de reprogramación, impiden su aplicación clínica en un futuro inmediato. Para que se convierta en realidad, numerosas investigaciones se están llevando a cabo con el objetivo de mejorar el procedimiento y hacerlo adecuado para su aplicación clínica. En este trabajo se propone un método que permitiría obtener células iPS a partir de células mesangiales mediante la transfección con un vector no integrativo, el virus Sendai, portador de los genes Oct3/4, Sox2, Klf4 y c-Myc. Al tratarse de un vector no integrativo, se minimizaría el efecto del proceso de reprogramación sobre la estabilidad del genoma celular. Además, en este proyecto se estudiará la capacidad de las células iPS obtenidas para diferenciarse en células progenitoras de podocitos que puedan ser aplicadas específicamente en terapias regenerativas para enfermos renales crónicos.

Análisis del comportamiento del CTC con problemas de clases muy desbalanceadas del repositorio KEEL

En este proyecto se analiza y compara el comportamiento del algoritmo CTC diseñado por el grupo de investigación ALDAPA usando bases de datos muy desbalanceadas. En concreto se emplea un conjunto de bases de datos disponibles en el sitio web asociado al proyecto KEEL (http://sci2s.ugr.es/keel/index.php) y que han sido ya utilizadas con diferentes algoritmos diseñados para afrontar el problema de clases desbalanceadas (Class imbalance problem) en el siguiente trabajo: A. Fernandez, S. García, J. Luengo, E. Bernadó-Mansilla, F. Herrera, "Genetics-Based Machine Learning for Rule Induction: State of the Art, Taxonomy and Comparative Study". IEEE Transactions on Evolutionary Computation 14:6 (2010) 913-941, http://dx.doi.org/10.1109/TEVC.2009.2039140 Las bases de datos (incluidas las muestras del cross-validation), junto con los resultados obtenidos asociados a la experimentación de este trabajo se pueden encontrar en un sitio web creado a tal efecto: http://sci2s.ugr.es/gbml/. Esto hace que los resultados del CTC obtenidos con estas muestras sean directamente comparables con los obtenidos por todos los algoritmos obtenidos en este trabajo.