Caracterização anatômica quantitativa e composição de óleos essenciais em três estágios foliares de clones de eucalipto e sua relação com a ferrugem

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Estudos para obtenção de cultura axênica de puccinia psidii e de marcadores bioquímicos voláteis para a resistência à ferrugem

Pós-graduação em Ciência Florestal - FCA

Fungos sapróbios do semiárido nordestino: aspectos fisiológicos, ação no controle da ferrugem e indução de enraizamento em mudas de eucalipto

Pós-graduação em Ciência Florestal - FCA

Resistência a cobre em Xanthomonas axonopodis pv. citri. Estudos de caracterização molecular e bioquímica de genes e proteínas

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Descrição dos sintomas de laranjeiras infectadas por Pratylenchus jaehni, resistência de porta-enxertos, faixa de hospedeiros e desenvolvimento de plantas jovens inoculadas

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Fitonematóides na cultura da batata: reação de genótipos a Meloidogyne spp., distribuição de espécies e caracterização dos sintomas

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

O Nematóide de galha da goiabeira (Meloydogyne mayaguensis Ramah & Hirschmann, 1988): identificação, hospedeiros e ação patogenica sobre goiabeiras

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Bioprospecção de bactérias endofíticas como agentes de biocontrole da mancha de Exserohilum turcicum e como promotoras do crescimento de plantas de milho (Zea mays L.)

Pós-graduação em Agronomia (Proteção de Plantas) - FCA

Expressão gênica diferencial de laranja Pêra Rio (Citrus sinensis (L.) Osbeck) e Lima Ácida 'Galego' (Citrus aurantifolia Swingle) em resposta à infecção por Xanthomonas citri subsp. citri

Pós-graduação em Agronomia (Genética e Melhoramento de Plantas) - FCAV

The Leukotriene B-4/BLT1 Axis Is a Key Determinant in Susceptibility and Resistance to Histoplasmosis

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Aggressiveness of pratylenchus brachyurus to sugarcane, compared with key nematode p. zeae

Pratylenchus zeae, Meloidogyne javanica and M. incognita are considered key species of nematodes in sugarcane in Brazil, but P. brachyurus is also frequently found. This study was conducted to determine the aggressiveness of P. brachyurus compared with P. zeae to sugarcane. Plants were grown in pots (100 L) in an open area with initial inoculation of 10, 100, 1,000, 10,000 and 100,000/plant for P. brachyurus and P. zeae. The nematode inocula were from in vitro, carrot-cylinder cultures. Sampling was performed every 60 days until 300 days after inoculation. At harvest, we evaluated the population dynamics of the nematodes and plant growth characteristics. The population for the initial levels of 10 and 100,000 specimens/plant, for P. brachyurus and P. zeae at 300 days after inoculation were similar. This fact shows that, upon detection of nematodes in a certain place during the planting of sugarcane, the ratoon on this area should be treated so as to control populations of P. brachyurus and/or P. zeae. The damage caused by the initial population of 10 specimens of P. brachyurus was similar to those of 10.000 specimens of P. zeae. The variety CTC 2 was classified as susceptible to P. zeae and intolerant to P. brachyurus. Compared to the control, the losses as measured by the volume and fresh weight of shoots by the nematode species were 29.82% and 40.34%, respectively. Pratylenchus brachyurus was more aggressive than P. zeae to the CTC 2 sugarcane variety.

Genetic variability in progenies of Eucalyptus dunnii Maiden for resistance to Puccinia psidii

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Assessment of the Removal Capacity, Tolerance, and Anatomical Adaptation of Different Plant Species to Benzene Contamination

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Next-generation sequencing reveals large connected networks of intra-host HCV variants

Background: Next-generation sequencing (NGS) allows for sampling numerous viral variants from infected patients. This provides a novel opportunity to represent and study the mutational landscape of Hepatitis C Virus (HCV) within a single host.Results: Intra-host variants of the HCV E1/E2 region were extensively sampled from 58 chronically infected patients. After NGS error correction, the average number of reads and variants obtained from each sample were 3202 and 464, respectively. The distance between each pair of variants was calculated and networks were created for each patient, where each node is a variant and two nodes are connected by a link if the nucleotide distance between them is 1. The work focused on large components having > 5% of all reads, which in average account for 93.7% of all reads found in a patient. The distance between any two variants calculated over the component correlated strongly with nucleotide distances (r = 0.9499; p = 0.0001), a better correlation than the one obtained with Neighbour-Joining trees (r = 0.7624; p = 0.0001). In each patient, components were well separated, with the average distance between (6.53%) being 10 times greater than within each component (0.68%). The ratio of nonsynonymous to synonymous changes was calculated and some patients (6.9%) showed a mixture of networks under strong negative and positive selection. All components were robust to in silico stochastic sampling; even after randomly removing 85% of all reads, the largest connected component in the new subsample still involved 82.4% of remaining nodes. In vitro sampling showed that 93.02% of components present in the original sample were also found in experimental replicas, with 81.6% of reads found in both. When syringe-sharing transmission events were simulated, 91.2% of all simulated transmission events seeded all components present in the source.Conclusions: Most intra-host variants are organized into distinct single-mutation components that are: well separated from each other, represent genetic distances between viral variants, robust to sampling, reproducible and likely seeded during transmission events. Facilitated by NGS, large components offer a novel evolutionary framework for genetic analysis of intra-host viral populations and understanding transmission, immune escape and drug resistance.

Estudos funcionais da rgs-CaM, uma calmodulina envolvida na supressão de silenciamento por RNA

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)