999 resultados para Atlantic rainforest Northeastern Brazil
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Results of apatite fission tracks from twelve samples collected across a Borborema Province transect, northeastern Brazil, revealed two major paleothermal events: a cooling event occurred between Albian and late Cenomanian (110 - 80 Ma) and a second cooling event starting on early Paleocene (66 Ma). Given the wide expression of the studied area (sampling trend along four brazilian states) a correlation between the distribution of fission track data and the current geological / geomorphological scenario was made possible, considering the area’s tectono - stratigraphic past and its thermochronologic evolution until now. The fact that the employed thermochronologic tool relates to a relatively shallow geothermometer, substancially information for understanding the behavior of basement brittle tectonic was achieved. These data were used to analyze faults origin and reactivation, associated with sedimentary basins evolution in the context of South America - Africa continental breakup.
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The Atlantic Rainforest biome has been going through fragmentation processes caused by agriculture and urbanization in green areas. Structural studies associated with the silvigenetic approach allow the understanding of what the past has caused in the present structure and predict future conditions of disturbed fragments. The objective of this study was to compare the composition and diversity of arboreous natural regeneration of steady-state and reorganization ecounits in two Seasonal Semideciduous Forest fragments. The hypothesis was that specific composition varies in these two different ecounits due to differential adaptation of species in canopy gaps and closed canopy. The survey was made in three areas with different perturbation backgrounds of 0,5 ha each. 60 permanent plots of 4m² each (2m x 2m) were stablished along the studied fragments following the proportion of ecounits presented in a previous mapping. Each plot was divided in 4 sub-plots of 1m² and arboreous individuals between 0,20m and 1,30m height were sampled and posteriorly separated in two height classes: I) individuals between 0,20m and 0,50m height (2m² sampling) and II) individuals between 0,51m and 1,30m height (4m² sampling). It was sampled 338 individuals from 53 families and 23 species. The Shannon index was 3,26 (Area A), 2,27 (Area B) and 2,42 (Area C) whereas Areas B and C values are considered low in our state Semidecidous Forests. Steady-state ecounits presented the highest values for abundance and species richness. Chi-square test pointed out species’ selection for determined ecounits in the studied community. Rarefaction method analysis showed diversity increase in steady-state ecounits and a stablishment in species richness curves for reorganization ecounits
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Coordenação de Aperfeiçoamento de Pessoal de NÃvel Superior (CAPES)
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Conselho Nacional de Desenvolvimento CientÃfico e Tecnológico (CNPq)
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Pós-graduação em Geociências e Meio Ambiente - IGCE
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Pós-graduação em Agronomia (Horticultura) - FCA
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Pós-graduação em Agronomia (Irrigação e Drenagem) - FCA
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Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
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Conselho Nacional de Desenvolvimento CientÃfico e Tecnológico (CNPq)
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Coordenação de Aperfeiçoamento de Pessoal de NÃvel Superior (CAPES)
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High throughput sequencing (HTS) provides new research opportunities for work on non-model organisms, such as differential expression studies between populations exposed to different environmental conditions. However, such transcriptomic studies first require the production of a reference assembly. The choice of sampling procedure, sequencing strategy and assembly workflow is crucial. To develop a reliable reference transcriptome for Triatoma brasiliensis, the major Chagas disease vector in Northeastern Brazil, different de novo assembly protocols were generated using various datasets and software. Both 454 and Illumina sequencing technologies were applied on RNA extracted from antennae and mouthparts from single or pooled individuals. The 454 library yielded 278 Mb. Fifteen Illumina libraries were constructed and yielded nearly 360 million RNA-seq single reads and 46 million RNA-seq paired-end reads for nearly 45 Gb. For the 454 reads, we used three assemblers, Newbler, CAP3 and/or MIRA and for the Illumina reads, the Trinity assembler. Ten assembly workflows were compared using these programs separately or in combination. To compare the assemblies obtained, quantitative and qualitative criteria were used, including contig length, N50, contig number and the percentage of chimeric contigs. Completeness of the assemblies was estimated using the CEGMA pipeline. The best assembly (57,657 contigs, completeness of 80 %, < 1 % chimeric contigs) was a hybrid assembly leading to recommend the use of (1) a single individual with large representation of biological tissues, (2) merging both long reads and short paired-end Illumina reads, (3) several assemblers in order to combine the specific advantages of each.
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Conselho Nacional de Desenvolvimento CientÃfico e Tecnológico (CNPq)
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Conselho Nacional de Desenvolvimento CientÃfico e Tecnológico (CNPq)
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Pós-graduação em Ciência dos Materiais - FEIS
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Conselho Nacional de Desenvolvimento CientÃfico e Tecnológico (CNPq)