Diversidade de actinobactérias isoladas da rizosfera de Rhizophora mangl e em manguezal preservado e impactado.

2008

COBERTURA Y USO DE LA TIERRA EN EL ECOSISTEMA DE MANGLE Y ZONA ECOTONAL DEL CORREDOR DEL MANGLE, DESDE LA BAHÍA DE JIQUILISCO, EL SALVADOR, HASTA EL ESTERO PADRE RAMOS, JIQUILILLO, NICARAGUA

Este estudio se realizó en el Corredor del Mangle (CM) desde Bahía de Jiquilisco, El Salvador, hasta Estero Padre Ramos, Nicaragua. El objetivo fue analizar la situación del ecosistema de manglar y zona ecotonal. Se utilizó técnicas de SIG y sensores remotos, y verificación en campo para la identificación de coberturas / usos de la tierra, que se compararon para determinar los cambios de la cobertura de mangle y ecotonos con el mapa de ecosistemas de Centroamérica (Banco Mundial y CCAD, 2001) y la cobertura vegetal de PROGOLFO (Velásquez, 1998). Se hizo una descripción fisonómica de los ecosistemas naturales: manglares, humedales, bosques, y matorrales o arbustales.  Se obtuvo la percepción de actores claves sobre su estado actual, determinándose que el deterioro y corte para extracción de recursos del manglar es la principal fuente de presión. Se concluyó que los ecosistemas naturales están altamente fragmentados y gran parte de ellos no se encuentran bajo ninguna categoría de manejo; que tienen amenazas provenientes de las presiones por cambio de cobertura / uso a través del deterioro y deforestación; y que los cambios de cobertura / uso de la tierra en los últimos años han afectado principalmente a la vegetación arbórea y arbustiva.

A trichordal temporal approach to digital coordination: the sociomaterial mangling of the CERN grid

This paper develops a sociomaterial perspective on digital coordination. It extends Pickering’s mangle of practice by using a trichordal approach to temporal emergence. We provide new understanding as to how the nonhuman and human agencies involved in coordination are embedded in the past, present, and future. We draw on an in-depth field study conducted between 2006 and 2010 of the development, introduction, and use of a computing grid infrastructure by the CERN particle physics community. Three coordination tensions are identified at different temporal dimensions, namelyobtaining adequate transparency in the present, modeling a future infrastructure, and the historical disciplining of social and material inertias. We propose and develop the concept of digital coordination, and contribute a trichordal temporal approach to understanding the development and use of digital infrastructure as being orientated to the past and future while emerging in the present.

黄槿内生真菌赤散囊菌及红海榄的次生代谢产物及其生物活性研究

由于生长环境的特殊性，红树林及其内生真菌的代谢产物在化学类型和生物活性方面都具有多样性，因此对其代谢产物的研究引起了人们越来越多的关注。本论文以菌丝体生物量、代谢产物量等指标及薄层色谱分析、高效液相色谱分析、抗菌活性测试等筛选手段对来源于我国海南红树植物的九株内生真菌在四种不同液体培养基上的静置发酵产物进行了综合评价，并从中选择了来源于半红树植物黄槿（Hibiscus tiliaceus）的内生真菌G2——赤散囊菌（Eurotium rubrum）进行了30 L规模发酵（采用PDB培养基）和次生代谢产物的研究，对分离得到的部分化合物进行了初步的生物活性评价。此外，本论文还对海南真红树植物红海榄（Rhizophora stylosa Griff.）的化学成分进行了研究，并对分离得到的部分化合物进行了二苯代苦味酰自由基（DPPH）清除活性的评价。 采用常规的硅胶柱层析、Sephadex LH-20柱层析、反相硅胶柱层析、制备薄层层析（pTLC）、重结晶等分离手段，分离纯化得到单体化合物。综合运用现代波谱技术 (IR、UV、MS、1D-NMR 和 2D-NMR) 以及与标准品或文献比对鉴定单体化合物的结构。从G2菌丝体和发酵液的合并提取物中鉴定了45个化合物的结构，其中13个为新化合物，结构类型包括6个苯甲醛类化合物（ER1*~ER6*）、4个蒽醌类化合物（ER15*~ ER18*）和3个含吲哚的二酮哌嗪生物碱类化合物（ER27*~ER29*）。 对以上分离鉴定的部分单体化合物进行了DPPH自由基清除活性、拒食杀虫活性、抗细菌活性以及体外细胞毒活性的初步评价。新化合物ER15*和三个已知化合物ER20、ER39和ER40都表现很强的DPPH自由基清除活性。化合物ER15*还表现较好的拒食杀虫活性，而化合物ER5*和ER18*不但没有杀虫活性，反而能促进幼虫的生长。所测试的化合物只有ER15*和ER18*表现出微弱的抗金黄色葡萄球菌活性。所测试的化合物对A-549、HL-60和P-388细胞株均未表现出有意义的体外细胞毒活性。 从红海榄枝条的提取物中分离鉴定了29个化合物，其中2个为新化合物，包括1个三萜酯（RS1*）和1个黄烷醇类化合物（RS12*）；另有1个三萜酯（RS5）和1个黄烷醇类化合物（RS11）作为新的天然产物被分离鉴定。 对从红海榄提取物乙酸乙酯相和正丁醇相分离得到的部分单体化合物进行了DPPH自由基清除活性的研究。黄烷醇类化合物RS16和RS17显示最强的活性。另外，实验结果说明黄烷醇类化合物的DPPH自由基清除活性与其分子中所含的羟基数目有一定关系，而且若芳香环上有多个邻位酚羟基，则该化合物的活性将增强。本论文实验结果为海南红海榄植物资源的利用提供了化学成分及抗氧化活性方面的科学依据。

Rapid Losses of Surface Elevation following Tree Girdling and Cutting in Tropical Mangroves.

Discussion Conclusions Materials and Methods Acknowledgments Author Contributions References Reader Comments (0) Figures Abstract The importance of mangrove forests in carbon sequestration and coastal protection has been widely acknowledged. Large-scale damage of these forests, caused by hurricanes or clear felling, can enhance vulnerability to erosion, subsidence and rapid carbon losses. However, it is unclear how small-scale logging might impact on mangrove functions and services. We experimentally investigated the impact of small-scale tree removal on surface elevation and carbon dynamics in a mangrove forest at Gazi bay, Kenya. The trees in five plots of a Rhizophora mucronata (Lam.) forest were first girdled and then cut. Another set of five plots at the same site served as controls. Treatment induced significant, rapid subsidence (−32.1±8.4 mm yr−1 compared with surface elevation changes of +4.2±1.4 mm yr−1 in controls). Subsidence in treated plots was likely due to collapse and decomposition of dying roots and sediment compaction as evidenced from increased sediment bulk density. Sediment effluxes of CO2 and CH4 increased significantly, especially their heterotrophic component, suggesting enhanced organic matter decomposition. Estimates of total excess fluxes from treated compared with control plots were 25.3±7.4 tCO2 ha−1 yr−1 (using surface carbon efflux) and 35.6±76.9 tCO2 ha−1 yr−1 (using surface elevation losses and sediment properties). Whilst such losses might not be permanent (provided cut areas recover), observed rapid subsidence and enhanced decomposition of soil sediment organic matter caused by small-scale harvesting offers important lessons for mangrove management. In particular mangrove managers need to carefully consider the trade-offs between extracting mangrove wood and losing other mangrove services, particularly shoreline stabilization, coastal protection and carbon storage.

High density mangrove plantation enhances surface accretion, surface elevation change, and tree survival in coastal areas susceptible to sea-level rise

Survival, growth, above ground biomass accumulation, soil surface elevation dynamics and nitrogen accumulation in accreted sediments were studied in experimental treatments planted with four different densities (6.96, 3.26, 1.93 and 0.95 seedlings m-2) of the mangrove Rhizophora mucronata in Puttalam Lagoon, Sri Lanka. Measurements were taken over a period of 1171 days and were compared with those from unplanted controls. Trees at the lowest density showed significantly reduced survival, whilst measures of individual tree growth did not differ significantly among treatments. Rates of surface sediment accretion (means ± S.E.) were 13.0 (±1.3), 10.5 (±0.9), 8.4 (±0.3), 6.9 (±0.5) and 5.7 (±0.3) mm yr-1 at planting densities of 6.96, 3.26, 1.93, 0.95, and 0 (unplanted control) seedlings m-2, respectively, showing highly significant differences among treatments. Mean (± S.E.) rates of surface elevation change were much lower than rates of accretion at 2.8 (±0.2), 1.6 (±0.1), 1.1 (±0.2), 0.6 (±0.2) and -0.3 (±0.1) mm yr-1 for 6.96, 3.26, 1.93, 0.95, and 0 seedlings m-2, respectively. All planted treatments appeared to accumulate greater nitrogen concentrations in the sediment compared to the unplanted control, and suggests one potential causal mechanism for the facilitatory effects observed; high densities of plants potentially contribute to the accretion of greater amounts of nutrient rich sediment. While this potential process needs further study, this study demonstrated how higher densities of mangroves enhance rates of sediment accretion and surface elevation, processes that may be crucial in mangrove ecosystem adaptation to sea level rise. There was no evidence that increasing plant density evoked a trade-off with growth and survival of the planted trees. Rather facilitatory effects enhanced survival at high densities, suggesting that local land managers may be able to take advantage of plantation densities to help mitigate sea-level rise effects by encouraging positive soil surface elevation increment, and perhaps even greater nutrient retention to promote mangrove growth and ameliorate nearshore eutrophication in tropical island environments.

Tropical paleoclimate reconstructions from stable isotopes of mangrove lipid biomarkers

Thesis (Ph.D.)--University of Washington, 2014

Tendencias en la dinámica poblacional y manejo de los manglares en la cuenca baja del río Pánuco, límite tropical del Golfo de México

Tesis (Doctorado en Ciencias Biológicas con Especialidad en Ecología) UANL

Bioactive Metabolites and Biomarkers from Rhizophoraceae mangroves- A Chemotaxonomic Approach

Mangroves are specialised ecosystems developed along estuarine sea coasts and river mouths in tropical and subtropical regions of the world, mainly in the intertidal zone. Hence, the ecosystem and its biological components is under the influence of both marine and freshwater conditions and has developed a set of physiological adaptations to overcome problems of anoxia, salinity and frequent tidal inundations. This has led to the assemblage of a wide variety of plant and animal species of special adaptations suited to the ecosystem. The path of photosynthesis in mangroves is different from other glycophytes. There are modifications or alterations in other physiological processes such as carbohydrate metabolism or polyphenol synthesis. As they survive under extreme conditions of salinity, temperature, tides and anoxic soil conditions they may have chemical compounds, which protect them from these destructive elements. Mangroves are necessarily tolerant of high salt levels and have mechanisms to take up water despite strong osmotic potentials. Some also take up salts, but excrete them through specialised glands in the leaves. Others transfer salts into senescent leaves or store them in the bark or the wood. Still others simply become increasingly conservative in their water use as water salinity increases. A usual transportation or biosynthetic path as other plants cannot be expected in mangrove plants. In India, the states like West Bengal, Orissa, Andhra Pradesh, Tamil Nadu, Andaman and Nicobar Islands, Kerala, Goa, Maharashtra, and Gujarat occupy vast area of mangroves. Kerala has only 6 km2 total mangrove area with Rhizophora apiculata, Rhizophora mucronata, Bruguiera gymnorrhiza, Bruguiera cylindrica, Avicennia officinalis, Sonneratia caseolaris, Sonneratia apetala and Kandelia candal, as the important species present, most of which belong to the family Rhizophoraceae.Rhizophoraceae mangroves are ranked as “major elements of mangroves” as they give the real shape of this unique and interesting ecosystem and these mangrove species most productive and typical characteristic ecosystem of World renowned. It was found that the Rhizophoraceae mangrove extracts exhibit several bioactive properties. Various parts of these mangroves are used in ethnomedicinal practices. Even though extracts from these mangroves possess therapeutic activity against humans, animal and plant pathogens, the specific metabolites responsible for these bioactivities remains to be elucidated. Various parts of these mangroves are used in ethnomedicinal practices. There is a gap of information towards the chemistry of Rhizophoraceae mangroves from Kerala. Thorough phytochemical investigation can achieve the validity of ethnomedicines as well as apply the use of mangrove plants in the development of new drugs. Such studies can pave a firm base for their use in biomarker and chemotaxonomic studies as well as for the better management of the existing mangrove ecosystem. In this study, the various chemical parameters including minerals, biochemical components, bioactive and biomarker molecules were used to classify and assess the possible potentials of the mangrove plants of the true mangrove family Rhizophoraceae from Kochi.

Periodic time series modeling of environmental proxy records with guaranteed positive growth rate estimation

Identifying a periodic time-series model from environmental records, without imposing the positivity of the growth rate, does not necessarily respect the time order of the data observations. Consequently, subsequent observations, sampled in the environmental archive, can be inversed on the time axis, resulting in a non-physical signal model. In this paper an optimization technique with linear constraints on the signal model parameters is proposed that prevents time inversions. The activation conditions for this constrained optimization are based upon the physical constraint of the growth rate, namely, that it cannot take values smaller than zero. The actual constraints are defined for polynomials and first-order splines as basis functions for the nonlinear contribution in the distance-time relationship. The method is compared with an existing method that eliminates the time inversions, and its noise sensitivity is tested by means of Monte Carlo simulations. Finally, the usefulness of the method is demonstrated on the measurements of the vessel density, in a mangrove tree, Rhizophora mucronata, and the measurement of Mg/Ca ratios, in a bivalve, Mytilus trossulus.

Geochemistry of iron and manganese in soils and sediments of a mangrove system, Island of Pai Matos (Cananeia - SP, Brazil)

Five zones along a transect of 180 m were selected for study on the Island of Pai Matos (Sao Paulo, Brazil). Four of the zones are colonised by vascular plants (Spartina SP, Laguncularia LG, Avicennia AV and Rhizophora RH) and were denominated soils, and the other zone, which lacks vegetation, was denominated sediment (SD). The geochemical conditions differed significantly in soils and sediment and also at different depths. The soils were oxic (Eh > 350 mV) or suboxic (Eh: 350-100 mV) at the surface and anoxic (Eh < 100 mV) at depth, whereas in the sediment anoxic conditions prevailed at all depths, but with a lower concentration of sulphides in the pore water and pyrite in the solid fraction. Under these geochemical conditions Fe is retained in the soils, while the Mn tends to be mobilized and lost. The most abundant form of iron oxyhydroxide was lepidocrocite (mean concentration for all sites and depths, 45 +/- 19 mu mol g(-1)), followed by goethite (30 19 mu mol g(-1))and ferrihydrite (19 +/- 11 mu mol g(-1)),with significant differences among the mean concentrations. There was a significant decrease with depth in all the types of Fe oxyhydroxides measured, particularly the poorly crystalline forms. The pyrite fraction was an important component of the free Fe pool (non-silicate Fe) in all soils as well as in the sediment, especially below 20 cm depth (mean concentration for all sites and depths, 60 +/- 54 mu mol CI). Furthermore, the mean concentration of Fe-pyrite for all sites and depths was higher than that obtained for any of the three Fe oxyhydroxides measured. The Fe-AVS was a minor fraction, indicating that the high concentrations of dissolved Fe in the soils in the upper area of the transect result from the oxidation of Fe sulphides during low tide. Mossbauer spectroscopy also revealed that most of the Fe (III) was associated with silicates, in this case nontronite. The presence of crystals of pyrite associated with phyllosilicates in samples from the upper layer of the soils may indicate that pyritization of this form of Fe(III) is more rapid than usually reported for ocean bed sediments. The sequential extraction of Mn did not reveal any clearly dominant fraction, with the Mn-carbonate fraction being the most prevalent, followed by exchangeable Mn and oxides of Mn, whereas pyrite-Mn and Mn associated with crystalline Fe-oxides were present at significantly lower concentrations. The high concentration of dissolved Mn found in the soils in the lower part of the transect is consistent with the fact that the solubility is determined by the carbonate fraction. Unlike for Fe, in the soils in the higher zone, which are subject to intense drainage during low tide, there was loss of Mn, as reflected by the concentration of total Mn. (C) 2008 Elsevier B.V. All rights reserved.

Mangrove sedimentary characteristics and implications for crab Ucides cordatus (Crustacea, Decapoda, Ucididae) distribution in an estuarine area of the Amazonian region

Na zona costeira, sedimentos, água e organismos interagem intensamente. Nas costas equatoriais dominadas por maré os manguezais são abundantes. Estas áreas são conhecidas por sua importância ecológica. No caso dos manguezais da costa atlântica da América do Sul o caranguejo-uçá Ucides cordatus (Linnaeus, 1763) se destaca por sua relevância ecológica e econômica, sendo que altas densidades deste organismo são encontradas na zona costeira amazônica. O presente estudo investiga a distribuição de sedimentos nos manguezais de Bragança (costa Amazônica, Brasil) e suas correlações com a vegetação e a distribuição do caranguejo-uçá. Quarenta e sete amostras de sedimento foram avaliadas, assim como caranguejos de 8 destas áreas foram coletados, onde o tipo dominante de vegetação foi também identificado. Os resultados demonstram que os sedimentos superficiais, assim como no extrato 0,8 a 1 m de profundidade, na área são principalmente compostos por silte (59%), incluindo em média 21% de areia e 20% de argila. O tipo de vegetação predominante foi significativamente correlacionado com a abundância e tamanho/peso dos caranguejos. As características sedimentares também foram substancialmente diferentes dependendo da vegetação. Áreas dominadas por Avicennia germinans tiveram mais areia e argila que as áreas dominadas por Rizophora mangle, onde a fração silte prevalece grandemente e os caranguejos eram significativamente maiores e mais abundantes. Os resultados demonstraram que sedimentos, invertebrados bentônicos e vegetação estão intimamente relacionados nos manguezais e devem ser estudados de maneira integrada.

Los manglares de la costa brasileña: revision preliminar de la literatura

Los manglares ocurren intermitentemente a lo largo del litoral brasileño desde Cabo Orange (4°21'N) en Amapá hasta la ciudad de Laguna (28°30'S). En este trabajo se sugiere la división del litoral en 7 trechos que comparten características geomorfológicas y rangos de condiciones meteorológicas similares. Estes trechos son: Litoral Guianense, Golfão Amazónico, Litoral de Ponta Coruçá a Ponta Mangues Secos, Litoral de Ponta Mangues Secos al Cabo Calcanhar, Litoral del Cabo Calcanhar al Recôncavo Baiano, Litoral Oriental y Costa Cristalina. El mayor desarrollo del manglar ocurre en los trechos Guianense y del Gofão Amazónico. Los manglares se desarrollhan por todo el litoral aún en los sectores donde la precipitación es en el orden de 500 mm/año. En las costas expuestas se desarrolla en las áreas anegadas detrás de medanos, canales, lagunas y márgenes de los estuarios, penetrando en ocasiones 30-40 km. Coloniza además las márgenes de las grandes bahías hasta los 28°30'S donde la temperatura anual es de 19.6°C y la temperatura media del mes más frío es de 15.7°C. En el trecho del Litoral Cristalino, el manglar alcanza su límite latitudinal en el estado de Santa Catarina. Rhizophora alcanza 27°53'S mientras que Avicennia continúa hasta los 28°30'S en Laguna. En la isla de Santa Catarina se encuentran manglares bien desarrollados dominados por Avicennia. Estos manglares alcanzan un porte promedio de 7.0 ± 0.4 m, tienen un DAP de 17.9 cm, densidades totales (≥ 2.5 cm) de 431 ± 93 árboles/ha y áreas basimétricas (≥ 2.5 cm) de 7.42 ± 0.80 m2/ha. Las áreas basimétricas bajas se deben al dominio de los rodales por pocos ejemplares de diámetros moderados. Debido a estas bajas densidades, la copa es rala y los bosques son extremadamente abiertos

Compound specific stable isotopes, BIT, pollen and spores of Miocene to Pliocene sediments of ODP Hole 175-1085A

Pollen and stable carbon (d13C) and hydrogen (dD) isotope ratios of terrestrial plant wax from the South Atlantic sediment core, ODP Site 1085, is used to reconstruct Miocene to Pliocene changes of vegetation and rainfall regime of western southern Africa. Our results reveal changes in the relative amount of precipitation and indicate a shift of the main moisture source from the Atlantic to the Indian Ocean during the onset of a major aridification 8 Ma ago. We emphasise the importance of declining precipitation during the expansion of C4 and CAM (mainly succulent) vegetation in South Africa. We suggest that the C4 plant expansion resulted from an increased equator-pole temperature gradient caused by the initiation of strong Atlantic Meridional Overturning Circulation following the shoaling of the Central American Seaway during the Late Miocene.

Palynological record and radiocarbon dates for sediment core T89-16, Congo River mouth

We present a high-resolution reconstruction of tropical palaeoenvironmental changes for the last deglacial transition (18 to 9 cal. kyr BP) based on integrated oceanic and terrestrial proxies from a Congo fan core. Pollen, grass cuticle, Pediastrum and dinoflagellate cyst fluxes, sedimentation rates and planktonic foraminiferal d18O ratios, uK37 sea-surface temperature and alkane/alkenone ratio data highlight a series of abrupt changes in Congo River palaeodischarge. A major discharge pulse is registered at around 13.0 cal. kyr BP which we attribute to latitudinal migration of the Intertropical Convergence Zone (ITCZ) during deglaciation. The data indicate abrupt and short-lived changes in the equatorial precipitation regime within a system of monsoonal dynamics forced by precessional cycles. The phases of enhanced Congo discharge stimulated river-induced upwelling and enhanced productivity in the adjacent ocean.