Controls on suppression of methane flux from a peat bog subjected to simulated acid rain sulfate deposition

The effect of acid rain SO42− deposition on peatland CH4 emissions was examined by manipulating SO42− inputs to a pristine raised peat bog in northern Scotland. Weekly pulses of dissolved Na2SO4 were applied to the bog over two years in doses of 25, 50, and 100 kg S ha−1 yr−1, reflecting the range of pollutant S deposition loads experienced in acid rain-impacted regions of the world. CH4 fluxes were measured at regular intervals using a static chamber/gas chromatographic flame ionization detector method. Total emissions of CH4 were reduced by between 21 and 42% relative to controls, although no significant differences were observed between treatments. Estimated total annual fluxes during the second year of the experiment were 16.6 g m−2 from the controls and (in order of increasing SO42− dose size) 10.7, 13.2, and 9.8 g m−2 from the three SO42− treatments, respectively. The relative extent of CH4 flux suppression varied with changes in both peat temperature and peat water table with the largest suppression during cool periods and episodes of falling water table. Our findings suggest that low doses of SO42− at deposition rates commonly experienced in areas impacted by acid rain, may significantly affect CH4 emissions from wetlands in affected areas. We propose that SO42− from acid rain can stimulate sulfate-reducing bacteria into a population capable of outcompeting methanogens for substrates. We further propose that this microbially mediated interaction may have a significant current and future effect on the contribution of northern peatlands to the global methane budget.

Profiling of Complex Microbial Populations by Denaturing Gradient Gel Electrophoresis Analysis of Polymerase Chain Reaction-Amplified Genes Coding for 16S rRNA

We describe a new molecular approach to analyzing the genetic diversity of complex microbial populations. This technique is based on the separation of polymerase chain reaction-amplified fragments of genes coding for 16S rRNA, all the same length, by denaturing gradient gel electrophoresis (DGGE). DGGE analysis of different microbial communities demonstrated the presence of up to 10 distinguishable bands in the separation pattern, which were most likely derived from as many different species constituting these populations, and thereby generated a DGGE profile of the populations. We showed that it is possible to identify constituents which represent only 1% of the total population. With an oligonucleotide probe specific for the V3 region of 16S rRNA of sulfate-reducing bacteria, particular DNA fragments from some of the microbial populations could be identified by hybridization analysis. Analysis of the genomic DNA from a bacterial biofilm grown under aerobic conditions suggests that sulfate-reducing bacteria, despite their anaerobicity, were present in this environment. The results we obtained demonstrate that this technique will contribute to our understanding of the genetic diversity of uncharacterized microbial populations.

硫酸盐还原菌和极化电位对海洋结构用钢在海泥中应力腐蚀开裂敏感性的影响

海洋设施长期处于恶劣的腐蚀环境中，如不加以防护，一旦发生应力腐蚀开裂（SCC），损失就会极为惨重。海底泥土区环境十分重要，因为管线和平台桩腿等都埋在海底泥中。海底泥中硫酸盐还原菌（SRB）十分活跃，而且为了防止腐蚀，海泥中的设施无一例外地采取了阴极保护，相当于设施处在长期稳定的充氢状态。因此非常有必要研究海泥中的活性SRB和极化电位对海洋结构用钢在海泥中的氢渗透行为和SCC敏感性造成的影响，弄清SCC发生和发展的过程以便采取相应的措施减缓或防止SCC。 本文通过慢应变速率拉伸实验（SSRT）、电化学阻抗谱（EIS）技术、动电位扫描极化曲线测定实验和氢渗透实验等研究了海泥中SRB和极化电位对16Mn钢和管线钢X56（API X56）的SCC敏感性造成的影响。 从渤海海泥中富集得到SRB菌种，并做出了SRB在海泥中的生长曲线；在荧光显微镜下观察SRB为弧状，可以归为脱硫弧菌属，为革兰氏阴性菌；海泥中活性SRB数量与硫电位等主要腐蚀环境因子具有一定的对应关系。 SSRT结果表明，施加阴极极化电位可以使试样断裂脆性特征明显，SCC敏感性增大；海泥中活性SRB浓度越高，断裂脆性特征越明显，SCC敏感性越大。在含SRB海泥中或阴极极化电位条件下，两种钢都容易发生SCC，氢脆（HIC）起主要作用。 随着浸泡天数的增加，试样在灭菌海泥中的Rp一直增大；在含SRB海泥中Rp先增大，又变小，并呈现出显著的Warburg阻抗特征；在灭菌海泥中，两种试样在阳极电位范围内无SCC敏感区，而在阴极电位范围内有明显的SCC敏感区；在含SRB海泥中，在阳极电位范围和阴极电位范围内均有SCC敏感区；SRB代谢产物既有阳极去极化作用，又有阴极去极化作用，能使腐蚀电流密度增加。 活性SRB的存在能够促进试样在海泥中的氢渗透；在实海工程应用中，两种钢在含SRB海泥中的氢渗透电流密度大约是在不含SRB海泥中的3~4倍。阴极极化电位能够促进试样在灭菌海泥中的氢渗透。在含SRB海泥中对试样施加阴极极化电位，氢渗透电流密度大于不加阴极极化电位时的氢渗透电流密度，也大于在不含SRB的海泥中的氢渗透电流密度。

硫酸盐还原菌对海洋用钢腐蚀行为的影响及其控制

本文研究了海水和海泥环境中硫酸盐还原菌（SRB）对海洋用钢腐蚀行为的影响及控制，探讨了SRB影响下的腐蚀机制，腐蚀产物的形成及转化过程，并研究了含有SRB的海泥环境中阴极保护对钢腐蚀的影响。 从我国青岛胶州湾海底泥中富集培养出SRB，进行分子生物学分析确定了研究菌种为肠状菌属，并以荧光显微镜和透射电镜（TEM）观察了SRB的形貌特征。 以失重法、电偶腐蚀、交流阻抗（EIS）、电子探针（EPMA）、TEM等手段研究了海洋用钢在含有活性SRB的海泥和海水环境中，从最初的细菌附着到代谢产物导致腐蚀产物从氧化物到硫化物的转化，腐蚀产物的形貌及成分确定，对腐蚀由抑制到加速的过程。此外从钢基体与腐蚀产物界面角度对SRB点蚀的形成和扩展，以及单晶氧化铁立方体在SRB菌液中的生物矿化进行了探讨。 对埋在含有SRB海泥中的低碳钢的阴极保护的可靠性进行评价，重点研究活性细菌存在下不同阴极保护电位下的交流阻抗行为，并结合失重法测试不同电位下的腐蚀速度、MPN法细菌计数以得出保护电位、腐蚀速度以及细菌活性之间的关系。为达到有效的保护，-950mV (CSE)甚至更低的保护电位是需要的。较高保护电位下，细菌的生长活性与稳定性低于低电位。

硫酸盐还原菌对海洋腐蚀行为的影响

本文通过使用多参数水质分析仪、循环伏安法、电化学阻抗法等测试手段研究了硫酸盐还原菌生长过程中硫酸盐还原菌数量、环境参数和碳钢腐蚀行为三者之间的关系；建立了一种有效的快速检测硫酸盐还原菌数量的方法并研究了其检测的机制；研究了硫酸盐还原菌对阴极氧还原反应的影响。 研究发现，硫酸盐还原菌生长过程对介质化学状态影响主要为在硫酸盐还原菌的新陈代谢过程作用下，硫离子浓度在增殖期快速增加，并在衰亡期和残余期保持不变，体系的还原性也与硫离子浓度同步变化。该介质中碳钢腐蚀行为与活性硫酸盐还原菌并无直接关系，主要取决于体系氧化还原性能。即在硫酸盐还原菌增殖期增强了阳极过程与腐蚀速度，并在硫酸盐还原菌衰亡期和残余期保持不变。 采用测定银电极的电极电位的方法可以检测体系中硫酸盐还原菌的数量，检测范围为50~10000ml-1，检测时间为2~3分钟。硫酸盐还原菌的吸附及其代谢生成硫离子的过程是导致银电极电位负移的原因。 在氧气饱和的3.5% NaCl溶液中，玻碳电极的阴极氧还原反应包括氧气一电子还原为超氧离子、氧气二电子还原为过氧化氢以及过氧化氢二电子还原为水分子三个步骤。硫酸盐还原菌催化了第一步和第二步反应中间产物超氧离子和过氧化氢的分解，从而使得阴极氧还原反应电流加大。

氯离子和硫酸盐还原菌对Q235钢溶解氧还原反应的影响

在海水环境中，溶解氧阴极还原反应是钢铁材料腐蚀的主要因素之一，海水中的氯离子（Cl−）和硫酸盐还原菌（SRB）可能对溶解氧还原反应发生作用从而影响钢铁材料的腐蚀行为。本文以海洋工程材料Q235钢作为研究对象，通过循环伏安法、电化学阻抗谱、旋转圆盘电极和旋转圆盘-圆环电极线性扫描伏安法等电化学方法，研究了Cl−和硫酸盐还原菌对Q235钢电极表面溶解氧还原反应的影响，并对其影响机制进行了探讨。 研究表明：Q235钢在模拟混凝土孔隙液中电极表面氧化物的还原反应和溶解氧的还原反应同时进行；溶解氧还原反应在阴极反应电位范围内最初为混合过程控制的二电子反应，电位较负时为扩散过程控制的四电子反应。当在0.02 M Ca(OH)2溶液中加入Cl−时，随着Cl−浓度的增加，溶液电阻减小，溶解氧还原反应峰电位逐渐正移，即溶解氧还原反应的过电位减小；同时随着氯离子浓度的增加溶解氧还原反应速率逐渐减小。 由于硫酸盐还原菌在电极表面形成的生物膜阻碍了溶解氧到达电极表面，使得溶解氧还原反应与无菌时相比在一定程度上受到抑制，溶解氧还原反应速率降低；同时由于硫酸盐还原菌形成生物膜的作用，使得溶解氧还原机理也发生了改变，在没有硫酸盐还原菌时溶解氧还原以四电子还原为主，当硫酸盐还原菌数量较少时，溶解氧还原反应以二电子反应主，当硫酸盐还原菌数量较多时转为一电子反应为主。

Prediction of marine sediment corrosion by fuzzy clustering analysis

Along with the development of marine industries, especially marine petroleum exploitation, more and more pipelines are buried in the marine sediment. It is necessary and useful to know the corrosion environment and corrosiveness of marine sediment. In this paper, field corrosion environmental factors were investigated in Liaodong Bay marine sediment containing sulfate-reducing bacteria (SRB) and corrosion rate of steel in the partly sediment specimens were determined by the transplanting burying method. Based on the data, the fuzzy clustering analysis (FCA) was applied to evaluate and predict the corrosiveness of marine sediment. On that basis, the influence factors of corrosion damage were discussed.

Effects of anaerobe in sea bottom sediment on the corrosion of carbon steel

The in-situ study of steel corrosion in sea bottom sediment (SBS) was carried out by Transplanting Burying Plate method (TBP method). It was found that the corrosion rate of steel in the sea bottom sediment with sulfate reducing bacteria (SRB) could be as high as ten times of that in sea bottom sediment without SRB. The experiments in simulated sea bottom sediments with different SRB contents by artificial culturing showed that the electrochemical behavior of steel in the sea bottom sediment with SRB was different from that without SRB. SRB altered the polarization behavior of steel significantly. The environment was acidified due to the activity of SRB and the corrosion of steel was accelerated. The corrosion of carbon steel in sea bottom sediment is anaerobic corrosion, and the main factor is anaerobe. There are SRB commonly in SBS, and the amount of SRB decreases along with the depth of sediment. Because of the asymmetry and variation of sea bottom sediment, the most dangerous corrosion breakage of steel in SBS is local corrosion caused by SRB. So the main countermeasure of corrosion protection of sea bottom steel facilities should be controlling of the corrosion caused by anaerobe.

Corrosion of carbon steel influenced by anaerobic biofilm in natural seawater

The bacteria in the anaerobic biofilm on rusted carbon steel immersed in natural seawater were characterized by culturing and molecular biology techniques. Two types of anaerobic bacterium, sulfate-reducing bacteria (SRB) Desulfovibrio caledoniensis and iron-reducing bacteria Clostridium sp. uncultured were found. The compositions of the rust layer were also analyzed and we found that iron oxide and sulfate green rust were the major components. To investigate the corrosion mechanisms, electrochemical impedance spectra was obtained based on the isolated sulfate-reducing bacteria and mixed bacteria cultured from rust layer in laboratory culture conditions. We found that single species produced iron sulfide and accelerated corrosion, but mixed species produced sulfate green rust and inhibited corrosion. The anaerobic corrosion mechanism of steel was proposed and its environmental significance was discussed. (c) 2008 Elsevier Ltd. All rights reserved.

The hydrogen permeation investigation of API X56 steel in sea mud

It was found that the corrosion rate of steel in the sea mud with sulfate-reducing bacteria (SRB) could be as high as 10 times of that in the sea mud without SRB. And the hydrogen permeation reaction would occur when metals were corroded. So it is necessary to investigate the effect of living SRB on hydrogen permeation in the sea mud. Cathodic potential was often added to metals in order to protect them. But hydrogen permeation could be affected by the cathodic potential. So it is also necessary to study the effect of cathodic potential on hydrogen permeation. In this paper, the hydrogen permeation actions of APT X56 steel in the sea mud with and without SRB at corrosion and cathodic potential were studied with an improved Devanathan-Stachurski's electrolytic cell. Experimental results showed that during the growth of SRB, the current density curve of hydrogen permeation was accordant with the growth curve of SRB. But the hydrogen permeation current density of APT X56 steel hardly changed in the sterilized sea mud. Compared with the hydrogen permeation current density of APT X56 steel in the sterilized sea mud, the hydrogen permeation of APT X56 steel in the sea mud could be accelerated by living SRB. Experimental results also showed that the hydrogen permeation current density increased rapidly when the cathodic potential was added to the three-electrode system of the cathodic cell, and then the hydrogen permeation current density could obtain a stable value slowly. So the cathodic potential added to the cathodic cell could accelerate hydrogen permeation.

Microbiological characteristics in a zero-valent iron reactive barrier

Zero-valent iron (Fe0)-based permeable reactive barriertreatment has been generating great interest for passivegroundwater remediation, yet few studies have paid particularattention to the microbial activity and characteristics withinand in the vicinity of the Fe0-barrier matrix. The presentstudy was undertaken to evaluate the microbial population andcommunity composition in the reducing zone of influence byFe0 corrosion in the barrier at the Oak Ridge Y-12 Plantsite. Both phospholipid fatty acids and DNA analyses were usedto determine the total microbial population and microbialfunctional groups, including sulfate-reducing bacteria,denitrifying bacteria, and methanogens, in groundwater andsoil/iron core samples. A diverse microbial community wasidentified in the strongly reducing Fe0 environment despitea relatively high pH condition within the Fe0 barrier (up topH 10). In comparison with those found in the backgroundsoil/groundwater samples, the enhanced microbial populationranged from 1 to 3 orders of magnitude and appeared to increase from upgradient of the barrier to downgradient soil. Inaddition, microbial community composition appeared to change overtime, and the bacterial types of microorganismsincreased consistently as the barrier aged. DNA analysisindicated the presence of sulfate-reducing and denitrifyingbacteria in the barrier and its surrounding soil. However, theactivity of methanogens was found to be relatively low,presumably as a result of the competition by sulfate/metal-reducing bacteria and denitrifying bacteria because of the unlimited availability of sulfate and nitrate in the site groundwater. Results of this study provide evidenceof a diverse microbial population within and in the vicinity ofthe iron barrier, although the important roles of microbial activity, either beneficially or detrimentally, on the longevityand enduring efficiency of the Fe0 barriers are yet to be evaluated.

Self-potential and spectral induced polarization signals associated with microbial sulphate reduction

Self-potential and spectral induced polarization responses associated with microbial processes involved in sulphate reduction have been monitored in a Perspex Winogradsky column filled with glass beads and growth medium. Salt-bridge is utilized as an electrolytic contact between experiment and control column. Equally spaced SP electrodes are used in combination of Ag-AgCl electrodes to compare electrodic and SP signals associated with the microbial processes involved in sulphate reduction. This study reveals that magnitude of SP varies from 5 to -2 mV and Electrodic potential 0 to -20 mV at the time of domination (day 39) of sulphate reducing bacteria which are very small in comparison to those measured by fixing both measuring and reference Ag-AgCl electrodes in experiment column. We observed that real and imaginary parts of complex conductivities increase with increase in production of H2S and CO in the experiment column. Both real and imaginary parts of surface complex conductivity vary at low frequencies similar to typical growth curve of bacterial population. Sodium lactate as a carbon source, dissolved in Lagan River water was flushed into the column for biostimulation on 144th day. The dissolved oxygen in flushed fluid might have killed the anaerobes in the column and decrease in complex conductivities similar to death phase of bacteria is observed for one week. The results obtained from this experiment should contribute to further understanding the biogeophysical responses involved in complex environments.


Read More: http://library.seg.org/doi/abs/10.1190/segj092009-001.57

Using microbiological tracers to assess the impact of winter land use restrictions on the quality of stream headwaters in a small catchment.

Diverse land use activities can elevate risk of microbiological contamination entering stream headwaters. Spatially distributed water quality monitoring carried out across a 17km(2) agricultural catchment aimed to characterize microbiological contamination reaching surface water and investigate whether winter agricultural land use restrictions proved effective in addressing water quality degradation. Combined flow and concentration data revealed no significant difference in fecal indicator organism (FIO) fluxes in base flow samples collected during the open and prohibited periods for spreading organic fertilizer, while relative concentrations of Escherichia coli, fecal streptococci and sulfite reducing bacteria indicated consistently fresh fecal pollution reached aquatic receptors during both periods. Microbial source tracking, employing Bacteroides 16S rRNA gene markers, demonstrated a dominance of bovine fecal waste in river water samples upstream of a wastewater treatment plant discharge during open periods. This contrasted with responses during prohibited periods where human-derived signatures dominated. Differences in microbiological signature, when viewed with hydrological data, suggested that increasing groundwater levels restricted vertical infiltration of effluent from on-site wastewater treatment systems and diverted it to drains and surface water. Study results reflect seasonality of contaminant inputs, while suggesting winter land use restrictions can be effective in limiting impacts of agricultural wastes to base flow water quality.

Bio-synthesis of nanosized semiconductors using mine wastes as material sources

This work describes the synthesis of nanosized metal sulfides and respective SiO2 and/or TiO2 composites in high yield via a straightforward process, under ambient conditions (temperature and pressure), by adding to aqueous metals a nutrient solution containing biologically generated sulfide from sulfate-reducing bacteria (SRB). The nanoparticles‘ (NPs) morphological properties were shown not to be markedly altered by the SRB growth media composition neither by the presence of bacterial cells. We further extended the work carried out, using the effluent of a bioremediation system previously established. The process results in the synthesis of added value products obtained from metal rich effluents, such as Acid Mine Drainage (AMD), when associated with the bioremediation process. Precipitation of metals using sulfide allows for the possibility of selective recovery, as different metal sulfides possess different solubilities. We have evaluated the selective precipitation of CuS, ZnS and FeS as nanosized metal sulfides. Again, we have also tested the precipitation of these metal sulfides in the presence of support structures, such as SiO2. Studies were carried out using both artificial and real solutions in a continuous bioremediation system. We found that this method allowed for a highly selective precipitation of copper and a lower selectivity in the precipitation of zinc and iron, though all metals were efficiently removed (>93% removal). This research has also demonstrated the potential of ZnS-TiO2 nanocomposites as catalysts in the photodegradation of organic pollutants using the cationic dye, Safranin-T, as a model contaminant. The influence of the catalyst amount, initial pH and dye concentration were also evaluated. Finally, the efficiency of the precipitates as catalysts in sunlight mediated photodegradation was investigated, using different volumes of dye-contaminated water (150 mL and 10 L). This work demonstrates that all tested composites have the potential to be used as photocatalysts for the degradation of Safranin-T.

Microbial community composition and mercury cycling in sediments of tagus estuary

Tese de doutoramento, Farmácia (Toxicologia), Universidade de Lisboa, Faculdade de Farmácia, 2016