Fractures on comet 67P/Churyumov-Gerasimenko observed by Rosetta/OSIRIS

The Optical, Spectroscopic, and Infrared Remote Imaging System (OSIRIS) experiment onboard the Rosetta spacecraft currently orbiting comet 67P/Churyumov-Gerasimenko has yielded unprecedented views of a comet's nucleus. We present here the first ever observations of meter-scale fractures on the surface of a comet. Some of these fractures form polygonal networks. We present an initial assessment of their morphology, topology, and regional distribution. Fractures are ubiquitous on the surface of the comet's nucleus. Furthermore, they occur in various settings and show different topologies suggesting numerous formation mechanisms, which include thermal insulation weathering, orbital-induced stresses, and possibly seasonal thermal contraction. However, we conclude that thermal insolation weathering is responsible for creating most of the observed fractures based on their morphology and setting in addition to thermal models that indicate diurnal temperature ranges exceeding 200K and thermal gradients of similar to 15K/min at perihelion are possible. Finally, we suggest that fractures could be a facilitator in surface evolution and long-term erosion.

First results of SONNE cruise SO121

The Red Sea is a very young ocean, and is one of the most interesting areas on Earth (ocean in statu nascendi). It is the only ocean where hydrothermal activity associated with ore formation occurs in a sterile environment (anoxic, hot, saline). In addition, its geographical position means that it is predestined to record the monsoonal history of the region in detailed sedimentary sequences. The major aim of the present project is to investigate the dynamics of hydrothermal systems in selected Deeps (Atlantis-II, Discovery, Kebrit, Al Wajh), Additional palaeoceanographic and microbiological questions should also be addressed. Specific aims are: 1. To study the hydrographic changes in individual Deeps (hydrothermal region Atlantis-II) and to investigate the causes of the temperature increase in the last few years (increased heat flow - higher temperature of the brine supply - higher brine flow rates?). 2.a. To document the influence of the hydrothermal systems on the sedimentary organic matter in the Deeps. In particular, the thermogenic production and migration of hydrocarbons in the sediments will be studied. The complex formation mechanisms (bacterial, thermogenic) of short-chain hydrocarbons (trace gases) will also be examined, 2.b. in addition, the polar and macromolecular fraction in samples from the various deeps will be studied in order to elucidate the formation, structure and source of the macromolecular oil fraction. 3. To clarify the palaeoceanographic conditions, sea-level changes and the climatic history (relationship of the circulation system and nutrient supply to the monsoon) of the southern Red Sea. 4. To separate microorganisms from the brines and to characterise them in terms of their metabolic physiology and ecology, and to describe their taxonomy.

The magnesium isotope composition of diagenetic dolomites from ODP Hole 112-685A and 201-1230A of the Peru Margin

The magnesium isotope composition of diagenetic dolomites and their adjacent pore fluids were studied in a 250 m thick sedimentary section drilled into the Peru Margin during Ocean Drilling Program (ODP) Leg 201 (Site 1230) and Leg 112 (Site 685). Previous studies revealed the presence of two types of dolomite: type I dolomite forms at ~ 6 m below seafloor (mbsf) due to an increase in alkalinity associated with anaerobic methane oxidation, and type II dolomite forms at focused sites below ~ 230 mbsf due to episodic inflow of deep-sourced fluids into an intense methanogenesis zone. The pore fluid delta 26Mg composition becomes progressively enriched in 26Mg with depth from values similar to seawater (i.e. -0.8 per mil, relative to DSM3 Mg reference material) in the top few meters below seafloor (mbsf) to 0.8 ± 0.2 per mil within the sediments located below 100 mbsf. Type I dolomites have a delta 26Mg of -3.5 per mil, and exhibit apparent dolomite-pore fluid fractionation factors of about -2.6 per mil consistent with previous studies of dolomite precipitation from seawater. In contrast, type II dolomites have delta 26Mg values ranging from -2.5 to -3.0 per mil and are up to -3.6 per mil lighter than the modern pore fluid Mg isotope composition. The enrichment of pore fluids in 26Mg and depletion in total Mg concentration below ~ 200 mbsf is likely the result of Mg isotope fractionation during dolomite formation, The 26Mg enrichment of pore fluids in the upper ~ 200 mbsf of the sediment sequence can be attributed to desorption of Mg from clay mineral surfaces. The obtained results indicate that Mg isotopes recorded in the diagenetic carbonate record can distinguish near surface versus deep formed dolomite demonstrating their usefulness as a paleo-diagenetic proxy.

An environmental magnetic study, sedimentological and numerical methods around Tauranga Harbour, New Zealand

Magnetic iron minerals are widespread and indicative sediment constituents in estuarine, coastal and shelf systems. We combine environmental magnetic, sedimentological and numerical methods to identify magnetite-enriched placer-like zones in a complex coastal system and delineate their formation mechanisms. Magnetic susceptibility and remanence measurements on 245 surficial sediment samples collected in and around Tauranga Harbour, the largest barrier-enclosed tidal estuary of New Zealand, reveal several discrete enrichment zones controlled by local hydrodynamic conditions. Active magnetite enrichment takes place in tidal channels, which feed into two coast-parallel nearshore magnetite-enriched belts centered at water depths of 6-10 m and 10-20 m. A close correlation between magnetite content and magnetic grain size was found, where higher susceptibility values are associated within coarser magnetic crystal sizes. Two key mechanisms for magnetite enrichment are identified. First, tide-induced residual currents primarily enable magnetite enrichment within the estuarine channel network. A coast-parallel, fine sand magnetite enrichment belt in water depths of less than 10 m along the barrier island has a strong decrease in magnetite content away from the southern tidal inlet and is apparently related to active coast-parallel transport combined with mobilizing surf zone processes. A second, less pronounced, but more uniform magnetite enrichment belt at 10-20 m water depth is composed of non-mobile, medium-coarse-grained relict sands, which have been reworked during post-glacial sea level transgression. We demonstrate the potential of magnetic methods to reveal and differentiate coastal magnetite enrichment patterns and investigate their formative mechanisms.

Túneles en macizos calcáreos karstificados: impacto en las obras subterráneas de los fenómenos kársticos, su evaluación y tratamiento

En esta Tesis Doctoral se aborda un tema poco estudiado en el ámbito de los túneles y cuya problemática está basada en los riesgos e incertidumbres que representa el diseño y ejecución de túneles en macizos calizos karstificados. Mediante un estudio profundo del comportamiento de distintos casos reales de túneles en macizos kársticos calizos, aportando la realización de modelos y la experiencia constructiva del autor, se pretende proponer un procedimiento que permita sistematizar las actuaciones, investigación, evaluación y tratamiento en los túneles en karst, como herramienta básica para la toma de decisiones primarias correctas. Además, se proponen herramientas que pueden ayudar a mejorar el diseño y a decidir las medidas más eficientes para afrontar los problemas que genera el karst en los túneles, minimizando los riesgos para todos los actores, su probabilidad e impacto. Se profundiza en tres fases principales (que son referidas en la tesis en cuatro Partes): La INVESTIGACIÓN del macizo rocoso: La investigación engloba todas las actuaciones observacionales encaminadas a obtener el IK (Índice de Karstificación), así como las investigaciones necesarias mediante recopilación de datos superficiales, hidrogeológicos, climáticos, topográficos, así como los datos de investigaciones geofísicas, fotointerpretación, sondeos y ensayos geotécnicos que sean posibles. Mediante la misma, se debe alcanzar un conocimiento suficiente para llevar a cabo la determinación de la Caracterización geomecánica básica del macizo rocoso a distintas profundidades, la determinación del Modelo o modo de karstificación del macizo rocoso respecto al túnel y la Zonificación del índice de karstificación en el ámbito de actuación en el que se implantará el túnel. En esta primera fase es necesaria la correcta Definición geométrica y trazado de la obra subterránea: En función de las necesidades que plantee el proyecto y de los condicionantes externos de la infraestructura, se deben establecer los requisitos mínimos de gálibo necesarios, así como las condiciones de máximas pendientes para el trazado en alzado y los radios mínimos de las curvas en planta, en función del procedimiento constructivo y motivación de construcción del túnel (ferrocarril, carretera o hidráulico, etc...). Estas son decisiones estratégicas o primerias para las que se ha de contar con un criterio y datos adecuados. En esta fase, son importantes las decisiones en cuanto a las monteras o profundidades relativas a la karstificación dominante e investigación de las tensiones naturales del macizo, tectónica, así como las dimensiones del túnel en función de las cavidades previstas, tratamientos, proceso de excavación y explotación. En esta decisión se debe definir, conocida ya de forma parcial la geotecnia básica, el procedimiento de excavación en función de las longitudes del túnel y la clasificación geomecánica del terreno, así como sus monteras mínimas, accesos y condicionantes medioambientales, pero también en función de la hidrogeología. Se establecerá la afección esperable en el túnel, identificando en la sectorización del túnel, la afección esperable de forma general para las secciones pésimas del túnel. Con todos estos datos, en esta primera aproximación, es posible realizar el inventario de casos posibles a lo largo del trazado, para poder, posteriormente, minimizar el número de casos con mayores riesgos (técnicos, temporales o económicos) que requieran de tratamiento. Para la fase de EVALUACIÓN de la matriz de casos posibles en función del trazado inicial escogido (que puede estar ya impuesto por el proyecto, si no se ha podido intervenir en dicha fase), es necesario valorar el comportamiento teórico del túnel en toda su longitud, estudiando las secciones concretas según el tipo y el modo de afección (CASOS) y todo ello en función de los resultados de los estudios realizados en otros túneles. Se debe evaluar el riesgo para cada uno de los casos en función de las longitudes de túnel que se esperan que sean afectadas y el proceso constructivo y de excavación que se vaya a adoptar, a veces varios. Es importante tener en cuenta la existencia o no de agua o relleno arcilloso o incluso heterogéneo en las cavidades, ya que los riesgos se multiplican, así mismo se tendrá en cuenta la estabilidad del frente y del perímetro del túnel. En esta segunda fase se concluirá una nueva matriz con los resultados de los riesgos para cada uno de los casos que se presentarán en el túnel estudiado. El TRATAMIENTO, que se debe proponer al mismo tiempo que una serie de actuaciones para cada uno de los casos (combinación de tipos y modos de afección), debiendo evaluar la eficacia y eficiencia, es decir la relevancia técnica y económica, y como se pueden optimizar los tratamientos. Si la tabla de riesgos que se debe generar de nuevo introduciendo los factores técnicos y económicos no resulta aceptable, será necesaria la reconsideración de los parámetros determinados en fases anteriores. Todo el desarrollo de estas tres etapas se ha recogido en 4 partes, en la primera parte se establece un método de estudio e interpretativo de las investigaciones superficiales y geotécnicas, denominado índice de karstificación. En la segunda parte, se estudia la afección a las obras subterráneas, modelos y tipos de afección, desde un punto de vista teórico. La tercera parte trata de una recopilación de casos reales y las consecuencias extraídas de ellos. Y finalmente, la cuarta parte establece los tratamientos y actuaciones para el diseño y ejecución de túneles en macizos kársticos calizos. Las novedades más importantes que presenta este trabajo son: El estudio de los casos de túneles realizados en karst calizo. Propuesta de los tratamientos más efectivos en casos generales. La evaluación de riesgos en función de las tipologías de túnel y afecciones en casos generales. La propuesta de investigación superficial mediante el índice de karstificación observacional. La evaluación mediante modelos del comportamiento teórico de los túneles en karst para casos muy generales de la influencia de la forma, profundidad y desarrollo de la karstificación. In this doctoral thesis is studied the recommended investigation, evaluation and treatment when a tunnel is planed and constructed in karstic calcareous rock masses. Calcareous rock masses were selected only because the slow disolution produces stable conduct and caves instead the problems of sudden disolutions. Karstification index (IK) that encompasses various aspects of research karstic rock mass is presented. The karst rock masses are all unique and there are no similarities between them in size or density cavities ducts, but both their formation mechanisms, like, geological and hydrogeological geomorphological evidence allow us, through a geomechanical survey and geological-photo interpretation in the surface, establish a karst evaluation index specific for tunnelling, which allows us to set a ranking of the intensity of karstification and the associated stadistic to find caves and its risk in tunnelling. This index is estimated and useful for decision-making and evaluation of measures to be considered in the design of a tunnel and is set in degrees from 0 to 100, with similar to the RMR degrees. The sectorization of the tunnel section and the types of condition proposed in this thesis, are estimated also useful to understand the different effects that interception of ducts and cavities may have in the tunnel during construction and service life. Simplified calculations using two-dimensional models contained in the thesis, have been done to establish the relationship between the position of the cavities relative to the section of the tunnel and its size in relation to the safety factors for each ground conditions, cover and natural stresses. Study of over 100 cases of tunnels that have intercepted cavities or karst conduits have been used in this thesis and the list of risks found in these tunnels have been related as well. The most common and effective treatments are listed and finally associated to the models and type of affection generated to give the proper tool to help in the critical decision when the tunnels intercept cavities. Some existing studies from Marinos have been considered for this document. The structure of the thesis is mainly divided 4 parts included in 3 steps: The investigation, the evaluation and the treatments, which match with the main steps needed for the critical decisions to be made during the design and construction of tunnels in karstic rockmasses, very important to get a successfully project done.

Experimental surgery to create subgenomes of Bacillus subtilis 168

The 4,188-kb circular genome of Bacillus subtilis 168 was artificially dissected into two stable circular chromosomes in vivo, one being the 3,878-kb main genome and the other the 310-kb subgenome that was recovered as covalently closed circular DNA in CsCl-ethidium bromide ultracentrifugation. The minimal requirements to physically separate the 310-kb DNA segment out of the genome were two interrepeat homologous sequences and an origin of DNA replication between them. The subgenome originated from the 1,255–1,551-kb region of the B. subtilis genome was essential for the cell to survive because the subgenome was not lost from the cell. The finding that the B. subtilis genome has a potential to be divided and the resulting two replicons stably maintained may shed light on origins and formation mechanisms of giant plasmids or second chromosomes present in many bacteria. Similar excision or its reversal process, i.e., integration of large sized covalently closed circular DNA pieces into the main genome, implies significant roles of subgenomes in the exchange of genetic information and size variation of bacterial genomes in bacterial evolution.