Effects of climate and land management changes on conservation : of mediterranean cork oak woodlands and their bird communities

Tese de doutoramento (co-tutela), Biologia (Biologia da Conservação), Faculdade de Ciências da Universidade de Lisboa, University of East Anglia, School of Environmental Sciences, 2014

Effet de la végétation sur la variabilité de la profondeur de dégel à petite échelle dans un paysage de tourbières en forêt boréale dans les Territoires du Nord-Ouest

Afin de mieux comprendre les effets des changements climatiques sur le pergélisol, il s’avère essentiel d’obtenir une meilleure connaissance des facteurs physiques et biologiques l’influençant. Même si plusieurs études font référence à l’influence de la végétation sur le pergélisol à grande échelle, l’effet de la végétation sur la profondeur du front de dégel du pergélisol à l’échelle de mètres, tel qu’exploré ici, est peu connu. L’étude s’est effectuée dans une forêt boréale tourbeuse dans la zone à pergélisol discontinu au sud des Territoires du Nord-Ouest (N61°18’, O121°18’). Nous avons comparé la profondeur de dégel aux mesures du couvert végétal suivantes : densité arborescente, couvert arbustif, indice de surface foliaire et présence de cryptogames (lichens et bryophytes). Nous avons trouvé qu’une plus grande densité arborescente menait à une moins grande profondeur de dégel tandis que le couvert arbustif (<50cm de hauteur) n’avait aucune influence. De plus, la profondeur de dégel dépendait de l’espèce des cryptogames et des microformes. Cette recherche quantifie l’influence de la végétation par strate sur la dégradation du pergélisol. Ultimement, les résultats pourront être pris en considération dans la mise en place des modèles, afin de valider les paramètres concernant la végétation, la dégradation du pergélisol et le flux du carbone.

Investigating Targets of Avian Habitat Management to Eliminate an Ecological Trap

Ecological traps are attractive population sinks created when anthropogenic habitat alteration inadvertently creates a mismatch between the attractiveness of a habitat based upon its settlement cues, and its current value for survival or reproduction. Traps represent a new threat to the conservation of native species, yet little attention has been given to developing practical approaches to eliminating them. In the northern Rocky Mountains of Montana, Olive-sided Flycatchers (Contopus cooperi) prefer to settle in patches of selectively harvested forest versus burned forest despite the lower reproductive success and higher nest predation risk associated with the former habitat. I investigated characteristics of preferred perch sites for this species and how these preferences varied between habitats and sexes. I then built on previous research to develop a range of management prescriptions for reducing the attractiveness of selectively harvested forest, thereby disarming the ecological trap. Female flycatchers preferred to forage from shorter perch trees than males, and females’ perches were shorter than other available perch trees. Both sexes preferred standing dead perch trees (snags) and these preferences were most obvious in harvested forest where snags are rarer. Because previous research shows that snag density is linked to habitat preference and spruce/fir trees are preferred nest substrate, my results suggest these two habitat components are focal habitat selection cues. I suggest alternative and complementary strategies for eliminating the ecological trap for Olive-sided Flycatchers including: (1) reduced retention and creation of snags, (2) avoiding selective harvest in spruce, fir, and larch stands, (3) avoiding retention of these tree species, and (4) selecting only even-aged canopy height trees for retention so as to reduce perch availability for female flycatchers. Because these strategies also have potential to negatively impact habitat suitability for other forest species or even create new ecological traps, we urge caution in the application of our management recommendations.

Consequences of Simulated Loss of Open Cerrado Areas to Bird Functional Diversity

Over the past 35 years, more than two thirds of the Cerrado`s original expanse has been taken by agriculture. Even if some attempts have been made to conserve closed cerrado physiognomies, open cerrado physiognomies, richer in species and more fragile, have been systematically ignored. These open physiognomies are used by almost half of the Cerrado bird species, many of which being endemics. Using data from 11 surveys carried out in Cerrado landscapes, we asked what would happen to bird functional diversity if open cerrado species became extinct. Open cerrado birds would be able to keep on average 59% of the functional diversity. If they became extinct, on average 27% of the functional diversity would be lost. In this case, the remaining functional diversity would be lower than what would be expected by chance in five sites. Although many functions were shared by both open cerrado and forest species, there was some degree of complementarity between them, highlighted by the decrease in functional diversity when the former became extinct. Destruction of open cerrado physiognomies would lead to a habitat simplification, decrease in bird functional diversity, and, ultimately, to a considerable impact on community functioning. Thus, open cerrado physiognomies must receive much more conservation attention than they are currently receiving, because they maintain a high bird functional diversity that would otherwise be considerably diminished Were open cerrado species to become extinct.

Cutaneous Resistance to Evaporative Water Loss in Brazilian Rhinella (Anura: Bufonidae) from Contrasting Environments

Influenced by taxonomic position. For example, bufonids are regarded as exhibiting a permeable skin that seems typical for terrestrial anurans. However, this assumption is supported by information on only four bufonid species; therefore, the enormous ecological diversity of the family remains poorly Investigated. To assess whether variation in R(s) within related bufonids correlates with environmental aridity, we measured area-specific rates of EWL of two Brazilian populations of Rhinella granulosa (previously Bufo granulosus), one from the Atlantic Forest and other from the semi-arid Caatinga, and compared both with the forest species R. ornato. Rhinella granulosa from the Atlantic Forest had higher cutaneous resistance than conspecifics from Caatinga and R. ornata. Rhinella ornato presented the lowest cutaneous resistance values. However, Rs were very close to zero In all three populations. We conclude that enhanced Rs is not part of the suite of traits allowing R. granulosa to exploit the Caatinga, and that variation in R(s) within bufonids may relate to traits other than water conservation. Some Information on microhabitat occupation and ventral skin morphology supports the idea that exceptional abilities for detecting and taking up water may be the key factors enhancing the survival of R. granulosa, and possibly other bufonids, in xeric environments.

Genetic structure, phylogeny, and biogeography of Brazilian eyelid-less lizards of genera Calyptommatus and Nothobachia (Squamata, Gymnophthalmidae) as inferred from mitochondrial DNA sequences

Calyptommatus and Nothobachia genera of gymnophthalmid lizards are restricted to sandy open habitats on Sao Francisco River margins, northeastern Brazil. Phylogenetic relationships and geographic distribution of the four recognized species of Calyptommatus were analyzed from partial mitochondrial cyt b, 12S, and 16S rRNA genes sequencing, taking allopatric populations of the monotypic Nothobachia ablephara as the outgroup. In Calyptommatus a basal split separated C. sinebrachiatus, a species restricted to the eastern bank of the river, from the three other species. In this clade, C. confusionibus, found on western margin, was recovered as the sister group of the two other species, C. leiolepis and C. nicterus, from opposite margins. According to approximate date estimations, C. sinebrachiatus would have separated from the other congeneric species by 4.4-6.5 my, and C. nicterus, also from eastern bank, would be diverging by 1.8-2.6 my from C. leiolepis, the sister species on the opposite margin. C. confusionibus and C. leiolepis, both from western sandy areas, would be differentiating by 2.8-5.0 my. Divergence times of about 3.0-4.0 my were estimated for allopatric populations of Nothobachia restricted to western margin. Significant differences in 16S rRNA secondary structure relatively to other vertebrates are reported. Distinct evolutionary patterns are proposed for different taxa in those sandy areas, probably related to historical changes in the course of Sao Francisco River. (C) 2010 Elsevier Inc. All rights reserved.

Landscape and farm scale management to enhance biodiversity conservation in the cocoa producing region of southern Bahia, Brazil

In southern Bahia, Brazil, large land areas are used for the production of cocoa (Theobroma cacao), which is predominantly grown under the shade of native trees in an agroforestry system locally known as cabruca. As a dominant forest-like landscape element of the cocoa region, the cabrucas play an important role in the conservation of the region`s biodiversity. The purpose of this review is to provide the scientific basis for an action plan to reconcile cocoa production and biodiversity conservation in southern Bahia. The available research collectively highlights the diversity of responses of different species and biological groups to both the habitat quality of the cabrucas themselves and to the general characteristics of the landscape, such as the relative extent and spatial configuration of different vegetation types within the landscape mosaic. We identify factors that influence directly or indirectly the occurrence of native species in the cabrucas and the wider landscape of the cocoa region and develop recommendations for their conservation management. We show that the current scientific knowledge already provides a good basis for a biodiversity friendly management of the cocoa region of southern Bahia, although more work is needed to refine some management recommendations, especially on shade canopy composition and density, and verify their economic viability. The implementation of our recommendations should be accompanied by appropriate biological and socioeconomic monitoring and the findings should inform a broad program of adaptive management of the cabrucas and the wider cocoa landscape.

Testes bioquímicos para avaliação do vigor em sementes de Mimosa caesalpiniaefolia Benth

Mimosa caesalpiniaefolia Benth. is a forest species of the Mimosaceae family, recommended for recovery of degraded areas. The evaluation of vigor by biochemical tests have been an important tool in the control of seed quality programs, and the electrical conductivity and potassium leaching the most efficient in the verifying the physiological potential. The objective, therefore, to adjust the methodology of the electrical conductivity test for seeds of M. caesalpiniaefolia, for then compare the efficiency of this test with the potassium in the evaluation of seed vigor of different lots of seeds M. caesalpiniaefolia. To test the adequacy of the electrical conductivity were used different combinations of temperatures , 25 °C and 30 ºC, number of seeds , 25 and 50, periods of imbibition , 4 , 8 , 12 , 16 and 24 hours , and volumes deionized water, 50 mL and 75mL. For potassium leaching test, which was conducted from the results achieved by the methodology of the adequacy of the electrical conductivity test, to compare the efficiency of both tests , in the classification of seeds at different levels of vigor, and the period 4 hours also evaluated because the potassium leaching test can be more efficient in the shortest time . The best combination obtained in experiment of electrical conductivity is 25 seeds soaked in 50 mL deionized or distilled water for 8 hours at a temperature of 30 ° C. Data were subjected to analysis of variance, the means were compared with each other by F tests and Tukey at 5 % probability, and when necessary polynomial regression analysis was performed. The electrical conductivity test performed at period eight hour proved to be more efficient in the separation of seed lots M. caesalpiniaefolia at different levels of vigor compared to the potassium test

Morfologia de frutos e sementes de espécies arbóreas do gênero Solanum L.

O objetivo do trabalho foi caracterizar a morfologia do fruto e da semente de três espécies florestais nativas do Brasil, Solanum granuloso-leprosum Dunal, S. lycocarpum A.St.-Hil. e S. pseudoquina A.St.-Hil., recomendadas para plantações destinadas à recuperação de áreas degradadas. Os frutos são indeiscentes, carnosos, do tipo baga, globosos, polispérmicos e constituídos por dois ou mais lóculos. As sementes são estenospérmicas, campilótropas, elipsóides, comprimidas, apresentando seção longitudinal largo-ovalada ou achatado-ovalada e seção transversal elíptica. Hilo mediano-marginal localizado em uma depressão e micrópila arredondada. Sementes albuminosas, com endosperma abundante, periférico, carnoso-firme, semitransparente e de coloração esbranquiçada. Embrião axial, linear, contínuo e curvado. em Solanum lycocarpum e S. pseudoquina o embrião é circinado e em S. granuloso-leprosum é espiralado.

Superação da dormência em sementes de Caesalpinia pyramidalis Tul

Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)

Profundidades de semeadura para emergência de plântulas de juazeiro

Juazeiro (Zizyphus joazeiro Mart.) é uma árvore brasileira típica dos sertões nordestinos. Endêmica da Caatinga, ela ocorre nos diversos Estados do Nordeste do Brasil e apresenta grande potencial econômico e é importante para a região semi-árida. Assim, este estudo teve como objetivo determinar a melhor profundidade de semeadura para a emergência de plântulas de Zizyphus joazeiro. O experimento foi realizado em casa-de-vegetação, tendo como substrato areia lavada e esterilizada contida em bandejas de plástico, com 4 repetições de 25 unidades de dispersão cada uma, nas seguintes profundidades (um, dois, três, quatro e cinco centímetros). A semeadura de juazeiro em ambiente protegido deve ser feita na profundidade entre 1,0 e 1,6cm, resultando em elevado aproveitamento das unidades de dispersão. A profundidade de 1cm resultou em menor tempo para a germinação total.

Métodos para quebra de dormência de unidades de dispersão de Zizyphus joazeiro Mart. (Rhamnaceae)

O Z. joazeiro é uma espécie florestal de grande importância socioeconômica para a Região Nordeste do Brasil e apresenta dificuldades na germinação das unidades de dispersão, causada pela impermeabilidade à água. Este estudo avaliou tratamentos pré-germinativos de superação de dormência de unidades de dispersão de Z. joazeiro. O experimento foi conduzido em casa de vegetação, no Centro de Ciências Agrárias da Universidade Federal da Paraíba, em Areia, PB, Brasil. Os tratamentos consistiram em: testemunha (unidades de dispersão intactas), escarificação mecânica com lixa d'água, imersão em água, à temperatura ambiente, por 24, 48, 72, 96 e 120 h, imersão em água à temperatura de 70 ºC, por 3 min, e imersão em ácido sulfúrico concentrado por 30, 60, 90, 120 e 150 min. As variáveis avaliadas foram porcentagem de emergência, primeira contagem e velocidade de emergência, comprimento e massa seca de plantas. Os tratamentos que propiciaram máxima emergência de plântulas de Z. joazeiro foram imersão de unidades de dispersão em água fria por 48 h, imersão em água a 70 ºC por 3 min e escarificação manual com lixa, por superar a dureza tegumentar das unidades de dispersão dessa espécie.

Seedlings production of Tabebuia heptaphylla in different substrates and levels of irrigation, in greenhouse conditions

The objective of this research was to evaluate the growth of Tabebuia heptaphylla seedlings in distinct substrates with different amounts of urban waste compost and the relation between this growth and irrigation. A completely randomized experimental design was used, with a factorial arrangement of 15 substrates and 2 irrigation levels. The substrates were composed by the combination of different materials: urban waste, tanned cattle manure, vermiculite, soil and the commercial form Plantmax (R). For the study of the seedlings development, the following characteristics were evaluated: plant height, stem diameter at soil level, number of leaves, above ground dry matter, root system dry matter, relation between plant height and stem base diameter, Dickson quality index and relation between plant height and above ground dry matter. Evaluations of plant height, stem diameter at soil level and number of leaves were made at 75, 90, 105, 120, 135 and 150 days after sowing. According to the results, it was concluded that urban waste compost does not increase plant development. Significant differences in relation to the irrigation levels were found, with better results for the 150% irrigation level compared to 100% evapotranspiration.

Efeito do sombreamento e do substrato sobre a germinação e o crescimento de plântulas de Acacia mangium e Acacia mearnsii

The speed and uniform germination of seeds, followed by the prompt seedling emergence, are highly desirable characteristics in seedling production. Studies aiming to enable the use of organic waste such as sewage sludge and pine bark in the supply chain represent a current demand. The aim of this study was to identify conditions of shading and substrate which are more favorable to the process of seed germination and seedling growth of Acacia mangium and Acacia mearnsii. After overcoming dormancy in hot water, the seeds were sown in three substrates: substrate plantmax commercial forest (control), pine bark and pine bark mixed with biosolids (1:1). The tubes were placed in a tree nursery under three shading conditions: 50%, 30% and 0% (full sun). The evaluated parameters were: speed and germination percentage (daily until 30 days) and shoot length of seedlings (weekly from 75 to 150 days). The experiment was a completely randomized design with treatments in a factorial 3 x 3 and the results were submitted to regression analysis. The highest germination was obtained in the sowing of Acacia mangium in pine bark at 30% shading and commercial substrate at 30 and 50% shading for Acacia mearnsii in pine bark under 50% shading or commercial substrate in full sun. For both species, seedlings grew faster and reached larger size in the final substrate of pine bark with biosolids and in any condition of shading (30 e 50 %) and full sun, anticipating the production of seedlings.

Vermiculita como substrato para o teste de germinação de sementes de ipê-amarelo

Vermiculite is a substrate used in seedling production of forest species and can be an option for the germination test of ipe seeds. The objective of this research was to evaluate the use of vermiculite in the germination test of Tabebuia chrysotricha seeds and to stablish appropriate particle size and moisture for this substrate. Four replications of 20 seeds were sown in soil, sand, paper rolls, and vermiculite with different particle sizes: micron (0.15-0.20 mm), superthin (0.21-0.30 mm), thin (0.30-0.50 mm) and medium (0.50-1.19 mm) moistened with water equivalent to 0.5, 1.0, 1.5 and 2.0 times the weight of the dry subtrate. Germination test was carried out at 30 degrees C. The percentage of normal seedlings was obtained seven days after sowing (first count) and then weekly until 28 days, when abnormal seedlings and dead seeds were also counted. It was concluded that the germination test of ipe seeds can be carried out with thin or medium vermiculite moistened with water equivalent to 1.5 times the dry weight of the substrate. These treatments resulted in higher and faster germination (21 days).