Microeukaryoticdiversity in the extreme environments of the Iberian PyriteBelt: a comparison between universal and fungi-specific primer sets, temperature gradient gel electrophoresis and cloning

FEMS Microbiology Ecology, Vol. 57, nº 1

Structural and successional variability of periphytic algal community in a Amazonian lake during the dry and rainy season (Rio Branco, Acre)

The colonization process and successional patterns of a periphytic algal community were evaluated in a Amazonian Viveiro Lake (Rio Branco, Acre, Brazil). Sampling was performed over a period of 35 days; at four-day intervals for 20 days, and then at five-day intervals. Water sampling for physical, chemical and biological analyses was done during the dry and rainy season. Glass slides were used as artificial substrates for periphyton colonization. The structural community was evaluated through population density, algae class, diversity indices and descriptive species. Species richness, diversity and evenness increased as succession progressed. While density of Bacillariophyceae, Euglenophyceae and Zygnemaphyceae increased with succession, Cyanobacteria remained dominant. Synechocystis aquatilis, Synechocystis diplococcus and Navicula pseudolanceolata were the main descriptive species in both the dry and rainy season. Cymbela tumida, Frustulia rhomboides, Trachelomonas lacustris and Closterium acicularis was correlated with an increase in hydrologic level during the rainy season. Conversely, the density of Chlamydomonas sp., Chroomonas nordstedtii, Trachelomonas volvocinopsis, Trachelomonas volvocina and Synechococcus linearis was correlated with an increase in water transparency during the dry season. In general, the periphytic algal community showed high diversity and species richness independent of season. Season also had little influence on representation of algae class and main descriptive species. However, successional patterns varied by season, and changes in hydrologic levels acted directly on the succession path of periphytic algae. More research on periphyton dynamics is needed to improve our understanding of tropical lake ecosystems, especially in Amazonian.

Plancto e hidrobiologia sanitária de tanques tropicais com dáfnias e rotíferos

The engineers of the modern University City are constructing a graceful bridge, named PONTE OSWALDO CRUZ, that crosses a portion of the Guanabara Bay (Fig. 1). The work at west pillar stopped for 3 years (The concret structure in Est. 1). As it will be seen from n.º 1 — 5 of the fig. 1, Est. I, the base of the structure will have five underground boxes of reinforcement, but, to-day they are just like as five uncovered water ponds, until at present: May 1963. (Est. I — fig. 3, n.º 3 — pond n.º 3; A. — old level of the water; B.— actual level of the water; c.— green water; E.— mass of bloom of blue algae Microcystis aeruginosa). Soon after SW portion, as 5 cells in series, of the pillar abutments, and also the NE portion nearly opposite in the Tibau Mount will be filled up with earth, a new way will link Rio City and the University City. We see to day Est. I, fig. 1 — the grasses on the half arenous beach of the Tibau Point. These natural Cyperaceae and Gramineae will be desappear because of so a new road, now under construction, when completed will be 33 feet above the mean sea level, as high as the pillar, covering exactly as that place. Although rainfall was the chief source of water for these ponds, the first water (before meterorological precipitations of whatever first rain it might fall) was a common tap water mixed with Portland Cement, which exuded gradually through the pores of the concret during its hardenning process. Some data of its first cement water composition are on the chemical table, and in Tab. n.º 4 and "Resultado n.º 1". The rain — receiving surface of each pond were about 15 by 16 feet, that is, 240 square feet; when they were full of water, their depth was of 2 feet 3", having each pond about 4,000 gallons. Climatic conditions are obviously similar of those of the Rio de Janeiro City: records of temperature, of precipitation and evaporation are seen on the graphics, figs. 2, 3, 4. Our conceptions of 4 phases is merely to satisfy an easy explanation thus the first phase that of exudation of concrete. We consider the 2nd. phase formation of bacterian and cyanophycean thin pellicel. 3rd. phase - dilution by rains, and fertilisation by birds; the 4th phase - plankton flora and fauna established. The biological material arrived with the air, the rains, and also with contaminations by dusts; with big portion of sand, of earth, and leaves of trees resulted of the SW wind actions in the storming days (See - Est. I, fig. 3, G. - the mangrove trees of the Pinheiro Island). Many birds set down and rest upon the pillar structure, its faeces which are good fertilizers fall into the ponds. Some birds were commonly pigeons, black ravens, swallows, sparrows and other sea mews, moor hens, and a few sea birds of comparatively rare occurence. We get only some examples of tropical dust contaminated helioplankton, of which incipient observations were been done sparcely. See the systematic list of the species of plankters. Phytoplankters - Cyanophyta algae as a basic part for food of zooplankters, represented chiefly by rotiferse, water-fleas Moinodaphnia and other Crustacea: Ostracoda Copepoda and Insecta: Chironomidae and Culicidae larvae. The polysaprobic of septic irruptions have not been done only by heating in summer, and, a good reason of that, for example: when the fifth pond was in polysaprobic phase as the same time an alike septic phase do not happened into the 3rd. pond, therefore, both were in the same conditions of temperature, but with unlike contaminations. Among the most important aquatic organisms used as indicatiors of pollution - and microorganisms of real importance in the field of sanitary science, by authorities of renown, for instance: PALMER, PRESCOTT, INGRAM, LIEBMANN, we choose following microalgae: a) The cosmopolite algae Scenedesmus quadricuada, a common indicator in mesosaprobio waters, which lives between pH 7,0 and it is assimilative of NO[3 subscripted] and NH[4 subscripted]. b) Species of the genus Chlamydomonas; it is even possible that all the species of theses genus inhabit strong-mesosaprobic to polysaprobic waters when in massive blooms. c) Several species of Euglenaceae in fast growing number, at the same time of the protozoa Amoebidae, Vorticellidae and simultaneous with deposition of the decaying cells of the blue algae Anacystis cyanea (= Microcystis) when the consumed oxygen by organic matter resulted in 40 mg. L. But, we found, among various Euglenacea the cosmopolite species (Euglena viridis, a well known polysaprobic indicatior of which presence occur in septic zone. d) Analcystis cyanea (= M. aeruginosa) as we observed was in blooms increasing to the order of billions of cells per litter, its maximum in the summer. Temperatures 73ºF to 82ºF but even 90ºF, the pH higher than 8. When these blue algae was joined to the rotifer Brachionus calyflorus the waters gets a milky appearance, but greenished one. In fact, that cosmopolite algae is used as a mesosaprobic indicator. Into the water of the ponds its predominance finished when the septic polysaprobic conditions began. e) Ankistrodesmus falcatus was present in the 5th pond from 26the. April untill the 26th July, and when N.NH[4 subscripted] gets 1.28 mg. L. and when chlorinity stayed from 0.034 to 0.061 mg. L. It never was found at N.NH[4 subscripted] higher than 1 mg. L. The green algae A. falcatus, an indicatior of pollution, lives in moderate mesosaprobic waters. f) As everyone knows, the rotifer eggs may be widely dispersed by wind. The rotifer Asplanchna brightwelli in our observation seemed like a green colored bag, overcharged by green cells and detritus, specially into its spacious stomach, which ends blindly (the intestine, cloaca, being absent). The stock of Asplanchna in the ponds, during the construction of the bridge "PONTE OSWALDO CRUZ" inhabits alkaline waters, pH 8,0 a 8,3, and when we observed we noted its dissolved oxygen from 3.5 to 4 mg. L. In these ponds Asplanchna lived in 0,2 P.PO[4 subscripted]. (Remember the hydobiological observations foreign to braslian waters refer only from 0.06 to 0,010 mg. L. P.PO[4 subscripted]; and they refer resistance to 0.8 N.NH[4 subscripted]). By our data, that rotiger resist commonly to 1.2 until 1.8 mg. L.N.NH[4 subscripted]; here in our ponds and, when NO[2 subscripted] appears Asplanchna desappears. It may be that Asplanchna were devoured by nitrite resistant animals of by Culicidae or other mosquitoes devoured by Due to these facts the number and the distribution of Asplanchna varies considerabley; see - plates of plankton successions. g) Brachionus one of the commonest members of class Rotatoria was frquently found in abundance into the ponds, and we notice an important biological change produce by the rotifer Brachonus colyciflorus: the occurence of its Brachionus clayciflorus forms pallas, is rare in Brazil, as we know about this. h) When we found the water flea MOinodaphnia we do not record simultanous presence of the blue algae Agmenellun (= Merismopedia).

Criptógamos do Parque Estadual das Fontes do Ipiranga, São Paulo, SP. Algas, 18: Chlorophyceae (Volvocales)

Trabalho é o levantamento florístico da ordem Volvocales na Reserva Biológica do Parque Estadual das Fontes do Ipiranga situado na cidade de São Paulo, estado de São Paulo, Brasil. Sete gêneros (Carteria, Chlamydomonas, Chlorogonium, Chloromonas, Coccomonas, Pandorina e Pteromonas) e 26 espécies foram identificados. Carteria com nove espécies foi o gênero mais bem representado na área, seguido de Chlamydomonas com sete, Chlorogonium com quatro, Chloromonas e Pteromonas com duas cada e Coccomonas e Pandorina com uma espécie cada. Carteria hiemale Skvortzov, C. lunzensis Pascher & Jahoda, C. plana Pascher, C. wisconsinensis Huber-Pestalozzi, Chlorogonium fusiforme Matvienko e C. gracile Matvienko foram as espécies mais bem representadas do ponto de vista de suas distribuições geográficas, pois cada uma ocorreu em duas localidades no parque.

Sucessão da comunidade de algas perifíticas em reservatório oligotrófico tropical (São Paulo, Brasil): comparação entre período seco e chuvoso

O trabalho visou avaliar a influência da escala temporal (sucessional e sazonal) sobre a biomassa, diversidade e estrutura específica da comunidade de algas perifíticas em reservatório oligotrófico tropical. A sucessão foi acompanhada em períodos seco e chuvoso com amostragens regulares a cada três dias, durante 27 dias, incluindo 16 variáveis abióticas e atributos do perifíton sobre substrato artificial. A clorofila-a foi baixa e similar entre períodos, porém com maiores perdas na época chuvosa. A diversidade foi elevada (3,4 a 4,5 bits ind-1) e relativamente estável entre períodos e durante a sucessão. As clorofíceas foram a classe mais abundante em quase toda sucessão, com destaque para Chlamydomonas planctogloea Skuja que contribuiu em média com 23% (seca) e 37% (chuva) da densidade total. A análise integrada entre as espécies e os fatores ambientais mostrou que a principal fonte de variabilidade ocorreu em função do período climático. Oocystis lacustris Chodat e Gymnodinium sp. apresentaram estreita associação com o período seco e aos menores valores de temperatura, amônio e maiores de pH, oxigênio dissolvido e fósforo total. Ao período chuvoso associaram-se Frustulia rhomboides (Ehr.) de Toni var. rhomboides e Cosmarium majae Strom correlacionadas de forma inversa às variáveis ambientais citadas. A estrutura do perifíton foi primordialmente controlada pela escala climática, sendo que os processos autogênicos sucessionais tiveram papel secundário. As associações de espécies de algas e o processo de acumulação de biomassa foram os atributos mais sensíveis a esta variação. Tais resultados contribuem para o escasso conhecimento sobre a estruturação do perifíton de reservatórios oligotróficos, servindo de referência para avaliação de sistemas tropicais alterados pela eutrofização.

Fitoplâncton em três lagoas marginais ao Rio Paranapanema e em sua desembocadura no Reservatório de Jurumirim (São Paulo, Brasil) durante um período prolongado de seca

Durante um período de desconexão (de outubro de 1999 a dezembro de 2000) entre lagoas laterais e o Rio Paranapanema, a estrutura da comunidade fitoplanctônica e suas alterações foram examinadas em amostras coletadas trimestralmente nas zonas litoral e pelágica. Um total de 183 táxons de algas foi encontrado, sendo a comunidade predominante constituída por Chlorophyceae e Bacillariophyceae no Rio Paranapanema e em um ambiente lacustre permanentemente isolado, e por Bacillariophyceae e Chlorophyceae em duas outras lagoas. Ao longo do ano, diminuição na riqueza de espécies foi encontrada somente no ambiente lêntico com maior perda de conectividade. Cryptophyceae foi abundante (densidades maior que a densidade média do fitoplâncton) nas três lagoas, zonas e épocas do ano, exceto na zona litoral da lagoa com maior perda de conectividade em novembro de 1999. No Rio Paranapanema, Cryptophyceae predominou em mês chuvoso (fevereiro), sendo os índices de diversidade mais elevados nos demais períodos. A seca severa acarretou redução significativa do volume e área de superfície das lagoas, uma delas, a lagoa isolada, sendo extinta no último período de amostragem. Somente, nesta última, um efeito de concentração na abundância do fitoplâncton foi evidente. O predomínio em densidade de Cryptomonas brasiliensis Castro, C. Bic. & D. Bic., Chroomonas spp. e Chlamydomonas spp. nas três lagoas foi atribuído às condições adversas para o desenvolvimento das demais algas. A baixa profundidade, a grande quantidade de sedimentos suspensos na água após episódios de ventos fortes e, em conseqüência, a extinção acentuada da luz, foram fatores limitantes para as algas não adaptadas a essas condições, a despeito das concentrações favoráveis de nutrientes. No Rio Paranapanema, as alterações temporais na estrutura da comunidade fitoplanctônica parecem estar associadas a flutuações de velocidade e fluxo de água bem como ao nível hidrológico.

Développement d’outils analytiques pour évaluer la biodisponibilité du Cd dans les eaux douces

Les phytochélatines (PC) sont des polypeptides ayant la structure générale, (alpha-Glu-Cys)n-Gly, où n = 2 à 11. Leur synthèse est induite par un grand nombre de végétaux en réponse à une élévation de la concentration du milieu en métaux, en particulier le cadmium (ci-après, Cd). Le but de cette étude a été de développer un outil pour évaluer la biodisponibilité du Cd dans les eaux douces. Pour ce faire, une méthode analytique a été réalisée afin de déterminer les phytochélatines induites dans les algues C. reinhardtii. Celle-ci consiste à utiliser la chromatographie liquide couplée à la spectrométrie de masse en tandem (LCHP-SM/SM) "on-line". L’ionisation des molécules est celle faite par électronébulisation (IEN) (traduction de electrospray ionisation). L’objectif principal de ce mémoire est la validation de cette méthode : la détermination des courbes de calibration et des limites de détection et l'identification d'interférences potentielles. L’utilisation de dithiothreitol (DTT) à une concentration de 25 mM a été nécessaire à la conservation de la forme réduite des phytochélatines. En effet, suite à la validation de la méthode d’analyse des phytochélatines il a été démontré qu’elle représente un potentiel d’application. Ceci dans la mesure où l’induction des phytochélatines (PC2, PC3 et PC4) dans les algues C. reinhardtii a été possible à deux concentrations de Cd (1 x 10-7 M et 1 x 10 6 M) et ce, après plusieurs temps d'induction (1, 2, 4, et 6 h). Ainsi, l’étude de la stabilité des phytochélatines a été réalisée et toutes les températures examinées ont démontré une diminution des phytochélatines analysées par HPLC-ESI-MS/MS. Il se pourrait que la cause de la dégradation des phytochélatines soit physique ou chimique plutôt que bactérienne. Toutefois, un approfondissement au niveau de la purification de la solution d’extraction serait nécessaire à la mise au point de la dite méthode analytique afin de quantifier les phytochélatines dans l’algue C. reinhardtii.

Sucessão da comunidade de algas perifíticas em reservatório oligotrófico tropical (São Paulo, Brasil): comparação entre período seco e chuvoso

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Fitoplâncton em três lagoas marginais ao Rio Paranapanema e em sua desembocadura no Reservatório de Jurumirim (São Paulo, Brasil) durante um período prolongado de seca

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Abundance of calcareous nannofossils in ODP Hole 122-761C (Table 1)

A biostratigraphically complete (all nannofossil biozones present) Cretaceous/Tertiary boundary was recovered at Site 761 on the Wombat Plateau, northwest Australian margin, during Ocean Drilling Program Leg 122. A quantitative study of calcareous nannofossils on closely spaced samples across the boundary reveals a rapid change in assemblages in a similar fashion to other Cretaceous/Tertiary boundary sites. Nannofossil species were placed into three categories: Tertiary, Cretaceous, and 'survivors'. The rapid sequential turnover in these assemblages is as follows: Cretaceous species are abruptly replaced at the boundary by opportunistic survivor species, which in turn are abruptly replaced by newly evolved Tertiary taxa. The uppermost Maestrichtian assemblage is distinctly mid-latitudinal with few Micula murus and rare to few Nephrolithus frequens. The nannofossil assemblage immediately above the boundary is dominated by an abundance bloom of Cyclagelosphaera spp. No Thoracosphaera or Braarudosphaera abundance blooms are present as at many other localities. The change from a survivor- to Tertiary-dominated assemblage is coincident with the CPla/CPlb nannofossil subzonal boundary, which is marked by the simultaneous first occurrence of several species including Cruciplacolithus tenuis and C. primus. The latter is found to first occur below C. tenuis in the most complete Cretaceous/Tertiary sections. A hiatus between Subzones CPla and CPlb is interpreted to explain this discrepancy.

Cretaceous calcareous nannofossils of DSDP Leg 77 holes

Five of the six sites drilled during Leg 77 of the Deep Sea Drilling Project yielded Cretaceous sediments. Two of these sites, 535 and 540, form a composite section that spans the upper Berriasian through most of the Cenomanian. Olive black marly limestones in this interval yield relatively rich, well-preserved nannofossil assemblages that allow biostratigraphic subdivision of the sequence. This composite section provides important information on the Early Cretaceous history of the Gulf of Mexico, as well as additional information on tropical Lower Cretaceous nannofossil assemblages. The post-Cenomanian nannofossil (and sedimentary) record is limited to a thin, condensed section of Santonian through lower Maestrichtian pelagic sediments at one site (538) and is absent or represented by redeposited material at the other sites. Two new genera, Perchnielsenella and Darwinilithus, are described. Two new taxa, Darwinilithus pentarhethum and Lithraphidites acutum ssp. eccentricum, are described; and two new combinations, Rhagodiscus reightonensis and Perchnielsenella stradneri, are propose.

Cretaceous and Paleogene calcareous nannofossils from ODP Leg 123

Two of five holes drilled at two separate sites during Leg 123 of the Ocean Drilling Program intersected thick and relatively complete sections of Upper Cretaceous-Paleogene nannofossiliferous sediments. Although dominated by turbidite deposition in the upper part, Hole 765C contains a thick and relatively complete Albian-Oligocene section, including a particularly thick Aptian interval, with abundant and fairly well-preserved nannofossils. Several unconformities are confidently interpreted in this section that span much of the Santonian, late Campanian, Maestrichtian, late Eocene, and early Oligocene. Hole 766A contains a thick and relatively complete Albian-lower Eocene section having generally abundant and well-preserved nannofossils. Several unconformities also have been identified in this section that span much of the Coniacian, early Campanian, Maestrichtian, and late Eocene through early Pliocene. The chronostratigraphic position and length of all these unconformities may have considerable significance for reconstructing the sedimentary history and for interpreting the paleoceanography of this region. A particularly thick section of upper Paleocene-lower Eocene sediments, including a complete record across the Paleocene/Eocene boundary, also was cored in Hole 766A that contains abundant and diverse nannofossil assemblages. Although assemblages from this section were correlated successfully using a standard low-latitude zonation, difficulties were encountered that reduced biostratigraphic resolution. Several lines of evidence suggest a mid-latitude position for Site 766 during this time, including (1) high assemblage diversity characteristic of mid-latitude zones of upwelling and (2) absence of certain ecologically controlled markers found only in low latitudes.

Phytoplankton parameters in the Large Aral Sea in June 2008

Species composition, abundance, and biomass of phytoplankton in the surface water layer were determined at 10 stations in the central part of the Western Basin (WB) and at one station in the Eastern Basin (EB) of the Large Aral Sea. 42 algal species were found. Diatoms had the highest number of species. Similarity of phytoplankton composition in the WB was high, whereas phytoplankton composition in the WB and EB differed significantly. In WB abundance and biomass of phytoplankton varied from 826x10**3 to 6312x10**3 cells/l (aver. 1877x10**3 cells/l) and from 53 to 241 ?g C/l (aver. 95 ?g C/l). In EB the phytoplankton abundance was 915x10**3 cells/l and 93 ?g C/l. Vertical distribution of phytoplankton in upper 35 m was investigated at one station in WB. Maximum values of phytoplankton abundance and biomass were recorded under the thermocline at 20 m depth. Integrated biomass of phytoplankton was 14 g C/m**2.

Profiles of diatoms, pollen, XRD, XRF and organic composition of two sediment cores (PG2022 and PG2023) from Lake Kyutyunda in Yakutia, NE Siberia, Russia

Although the climate development over the Holocene in the Northern Hemisphere is well known, palaeolimnological climate reconstructions reveal spatiotemporal variability in northern Eurasia. Here we present a multi-proxy study from north-eastern Siberia combining sediment geochemistry, and diatom and pollen data from lake-sediment cores covering the last 38,000 cal. years. Our results show major changes in pyrite content and fragilarioid diatom species distributions, indicating prolonged seasonal lake-ice cover between ~13,500 and ~8,900 cal. years BP and possibly during the 8,200 cal. years BP cold event. A pollen-based climate reconstruction generated a mean July temperature of 17.8°C during the Holocene Thermal Maximum (HTM) between ~8,900 and ~4,500 cal. years BP. Naviculoid diatoms appear in the late Holocene indicating a shortening of the seasonal ice cover that continues today. Our results reveal a strong correlation between the applied terrestrial and aquatic indicators and natural seasonal climate dynamics in the Holocene. Planktonic diatoms show a strong response to changes in the lake ecosystem due to recent climate warming in the Anthropocene. We assess other palaeolimnological studies to infer the spatiotemporal pattern of the HTM and affirm that the timing of its onset, a difference of up to 3,000 years from north to south, can be well explained by climatic teleconnections. The westerlies brought cold air to this part of Siberia until the Laurentide ice-sheet vanished 7,000 years ago. The apparent delayed ending of the HTM in the central Siberian record can be ascribed to the exceedance of ecological thresholds trailing behind increases in winter temperatures and decreases in contrast in insolation between seasons during the mid to late Holocene as well as lacking differentiation between summer and winter trends in paleolimnological reconstructions.

Calcareous nannofossil stratigraphy, nannofossil events and carbon isotopic ratios of ODP Leg 183 sites

Cores from Sites 1135, 1136, and 1138 of Ocean Drilling Program Leg 183 to the Kerguelen Plateau (KP) provide the most complete Paleocene and Eocene sections yet recovered from the southern Indian Ocean. These nannofossil-foraminifer oozes and chalks provide an opportunity to study southern high-latitude biostratigraphic and paleoceanographic events, which is the primary subject of this paper. In addition, a stable isotope profile was established across the Cretaceous/Tertiary (K/T) boundary at Site 1138. An apparently complete K/T boundary was recovered at Site 1138 in terms of assemblage succession, isotopic signature, and reworking of older (Cretaceous) nannofossil taxa. There is a significant color change, a negative carbon isotope shift, and nannofossil turnover. The placement of the boundary based on these criteria, however, is not in agreement with the available shipboard paleomagnetic stratigraphy. We await shore-based paleomagnetic study to confirm or deny those preliminary results. The Paleocene nannofossil assemblage is, in general, characteristic of the high latitudes with abundant Chiasmolithus, Prinsius, and Toweius. Placed in context with other Southern Ocean sites, the biogeography of Hornibrookina indicates the presence of some type of water mass boundary over the KP during the earliest Paleocene. This boundary disappeared by the late Paleocene, however, when there was an influx of warm-water discoasters, sphenoliths, and fasciculiths. This not only indicates that during much of the late Paleocene water temperatures were relatively equable, but preliminary floral and stable isotope analyses also indicate that a relatively complete record of the late Paleocene Thermal Maximum event was recovered at Site 1135. It was only at the beginning of the middle Eocene that water temperatures began to decline and the nannofossil assemblage became dominated by cool-water species while discoaster and sphenolith abundances and diversity were dramatically reduced. One new taxonomic combination is proposed, Heliolithus robustus Arney, Ladner, and Wise.