Chromosome comparison between two species of Phyllostomus (Chiroptera - Phyllostomidae) from Eastern Amazonia, with some phylogenetic insights

Os cariótipos de Phyllostomus discolor e P. hastatus da Amazônia oriental são estudados por bandeamentos G, C, G/C sequencial e coloração Ag-NOR. Ambas as espécies apresentaram 2n = 32, sendo o complemento autossômico composto por 15 pares bi-armed em P. discolor e 14 bi-armed mais 1 par acrocêntrico em P. hastatus. O cromossomo X é um submetacêntrico médio e o Y é um pequeno acrocêntrico em ambas as espécies. O presente estudo encontrou apenas uma diferença entre os cariótipos de P. discolor e P. hastatus: o menor autossomo (par 15) é metacêntrico em discolor e acrocêntrico em hastatus. Este resultado é melhor explicado por uma inversão pericêntrica. O bandeamento C revelou heterocromatina constitutiva na região centromérica de todos os cromossomos, e os sítios NOR foram localizados na região distal do par 15, em ambas as espécies. O táxon P. discolor é considerado primitivo para o gênero Phyllostomus e supõe-se que a forma metacêntrica do par 15 seja a condição primitiva, que foi rearranjada por uma inversão pericêntrica, originando a forma acrocêntrica encontrada em P. hastatus.

Occurrence of the Indo-Pacific freshwater prawn Macrobrachium equidens Dana 1852 (Decapoda, Palaemonidae) on the coast of Brazilian Amazonia, with notes on its reproductive biology

O camarão de água doce Macrobrachium equidens, nativo da região do Indo-Pacífico, foi registrada pela primeira vez na costa da Amazônia Brasileira. Esta espécie foi encontrada habitando o mesmo ambiente que duas espécies nativas do gênero Macrobrachium: M. amazonicum e M. acanthurus, e é morfologicamente muito similar à última. A identificação dessa espécie foi confirmada pela análise da sequencia genética do gene mitocondrial Citocromo Oxidase (COI). Uma descrição detalhada das características morfológicas e biologia reprodutiva de M. equidens neste novo ambiente que é apresentada.

Precolumbian land use and settlement pattern in the Santarém region, lower Amazon

Uma das áreas mais promissoras para o estudo das sociedades pré-colombianas complexas na bacia do rio Amazonas é a área do baixo curso dos rios Tapajós, Trombetas e Nhamundá. Há relatos escritos sobre os Konduri e os Tapajós, apresentando informações sobre a sua organização social regional, padrões de comércio, a abundância de alimentos, e o mundo material. Assim, evidências arqueológicas – sítios imensos, solos antrópicos, e belos artefatos – podem ser contrastadas com a informação escrita. Estes ricos depósitos culturais estão desaparecendo a um ritmo alarmante, à medida em que os centros urbanos crescem e se expande a agricultura na região. Apesar desta situação, pouca pesquisa arqueológica tem sido realizada na área, especialmente quando se trata de investigar os antigos padrões de assentamento e redes de trocas. Nos últimos anos, temos realizado pesquisas na bacia do baixo rio Tapajós. O registro arqueológico indica que a cerâmica mostrando forte semelhança estilística forte com a encontrada no grande sítio central está espalhada por pelo menos 90 quilômetros ao sul da presente cidade de Santarém. Este artigo apresenta os resultados de uma pesquisa regional realizada nas proximidades de Santarém, no planalto de Belterra e Alter do Chão, oferecendo uma análise preliminar do sistema de assentamentos na região.

A new species of Mesocoelium (Digenea: Mesocoeliidae) found in Rhinella marina (Amphibia: Bufonidae) from Brazilian Amazonia

ABSTRACT: Mesocoelium lanfrediae sp. nov. (Digenea: Mesocoeliidae) inhabits the small intestine of Rhinella marina (Amphibia: Bufonidae) and is described here, with illustrations provided by light, scanning electron microscopy and molecular approachs. M. lanfrediae sp. nov. presents the typical characteristics of the genus, but is morphometrically and morphologically different from the species described previously. The main diagnostic characteristics of M. lanfrediae sp. nov. are (i) seven pairs of regularly-distributed spherical papillae on the oral sucker, (ii) ventral sucker outlined by four pairs of papillae distributed in a uniform pattern and interspersed with numerous spines, which are larger at the posterior margin and (iii) small, rounded tegumentary papillae around the opening of the oral sucker, which are morphologically different from those of the oral sucker itself, some of which are randomly disposed in the ventrolateral tegumentary region of the anterior third of the body. Addionally, based on SSU rDNA, a phylogenetic analysis including Brachycoeliidae and Mesocoeliidae taxa available on GenBank established the close relationship between M. lanfrediae sp. nov. and Mesocoelium sp.

Insights of meso and micro-scale processes for the Caxiuanã forest region from high resolution simulation

Dados meteorológicos e simulações numéricas de alta resolução foram usados para estimar campos espaciais na região leste da Amazônia onde se situam a Floresta e a Baía de Caxiuanã, no Estado do Pará. O estudo foi feito para o período de Novembro de 2006, quando foi realizado o experimento de campo COBRA-PARÁ. Análises de imagens do sensor MODIS mostram a ocorrência de vários fenômenos locais como avenidas de nuvens, sistemas convectivos precipitantes, e importante influência das interfaces entre a floresta e as superfícies aquáticas. Simulações numéricas para o dia 7 de novembro de 2006 mostraram que o modelo representou bem as principais variáveis meteorológicas. Os resultados mostram que a Baía de Caxiuanã provoca importante impacto nos campos meteorológicos adjacentes, principalmente, através da advecção pelos ventos de nordeste que induzem a temperaturas do dossel mais frias a oeste da baía. Simulações de alta resolução (LES) produziram padrões espaciais de temperatura e umidade alinhados com os ventos durante o período diurno e mudanças noturnas causadas principalmente pela presença da baía e chuvas convectivas. Correlações espaciais entre os ventos de níveis médios e os fluxos verticais de calor latente mostraram que existe uma mudança de correlações negativas para as primeiras horas do dia passando para correlações positivas para o período da tarde e início da noite.

Chemical composition of phytoplankton from the estuaries of Eastern Amazonia

O fitoplancton é de grande importância para os estudos das interações solo-água, como indicadores de modificações químicas e biológicas nos ecossistemas naturais. O objetivo desse estudo foi determinar a composição química total do fitoplâncton nos estuários do rio Pará e Mocajuba (Pará, Brasil). As análises químicas foram realizadas na água superficial, sedimento de fundo (amostra total e fração biodisponível) e no fitoplancton, por espectrometria óptica e de massa com plasma indutivamente acoplado. A composição química elementar do fitoplancton é composta por elevadas concentrações de Ca, P, Mn, Fe, Zn, Al, Ba e Pb. O fitoplancton do estuário do rio Mocajuba é rico em Fe (2.967 a 84.750 µg g^-1) e do rio Pará rico em Al (1.216 a 15.389 µg g^-1), provavelmente com contribuição antropogênica. O material fitoplanctonico apresentou elevado fator de bioconcentração proveniente tanto da água quanto da fração biodisponível, e reflete a eficiência desses organismos em concentrar metais.

Erosion of an active fault scarp leads to drainage capture in the Amazon region, Brazil

Far from the continental margin, drainage basins in Central Amazonia should be in topographic steady state; but they are not. Abandoned remnant fluvial valleys up to hundreds of square kilometers in size are observed throughout Amazonia, and are evidence of significant landscape reorganization. While major Late Miocene drainage shifts occurred due to initiation of the transcontinental Amazon River, local landscape change has remained active until today. Driven either by dynamic topography, tectonism, and/or climatic fluctuations, drainage captures in Amazonia provide a natural experiment for assessing the geomorphic response of low-slope basins to sudden, capture related base-level falls. This paper evaluates the timing of geomorphic change by examining a drainage capture event across the Baependi fault scarp involving the Cuieiras and TarumA-Mirim River basins northwest of the city of Manaus in Brazil. A system of capture-related knickpoints was generated by base-level fall following drainage capture; through numerical modeling of their initiation and propagation, the capture event is inferred to have occurred between the middle and late Pleistocene, consistent with other studies of landscape change in surrounding areas. In low-slope settings like the Amazon River basin, base-level fall can increase erosion rates by more than an order of magnitude, and moderate to large river basins can respond to episodes of base-level fall over timescales of tens to hundreds of thousands of years. Copyright (c) 2013 John Wiley & Sons, Ltd.

A new genus and two new species of Opilioacaridae (Acari: Parasitiformes) from Amazonia, Brazil with a key to world genera

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Genetic diversity and population structure of the New World screwworm fly from the Amazon region of Brazil

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Key to the soldiers of Angularitermes Emerson with a new species from Brazilian Amazonia (Isoptera: Termitidae: Nasutitermitinae)

An identification key based on characters of the soldier caste is provided for species of Angularitermes. Soldiers of previously described species in the genus, A. clypeatus, A. nasutissimus, A. orestes, A. pinocchio and A. tiguassu, are illustrated along with a new species, Angularitermes coninasus, n. sp., that is described and illustrated from soldier and worker castes. Samples of the new species were collected from epigeal nests at the Brazilian Amazon rainforest. The soldier of A. coninasus, n. sp. is distinguished from its congeners by having a short conical frontal tube, much wider at its base.

Convergent Adaptations: Bitter Manioc Cultivation Systems in Fertile Anthropogenic Dark Earths and Floodplain Soils in Central Amazonia

Shifting cultivation in the humid tropics is incredibly diverse, yet research tends to focus on one type: long-fallow shifting cultivation. While it is a typical adaptation to the highly-weathered nutrient-poor soils of the Amazonian terra firme, fertile environments in the region offer opportunities for agricultural intensification. We hypothesized that Amazonian people have developed divergent bitter manioc cultivation systems as adaptations to the properties of different soils. We compared bitter manioc cultivation in two nutrient-rich and two nutrient-poor soils, along the middle Madeira River in Central Amazonia. We interviewed 249 farmers in 6 localities, sampled their manioc fields, and carried out genetic analysis of bitter manioc landraces. While cultivation in the two richer soils at different localities was characterized by fast-maturing, low-starch manioc landraces, with shorter cropping periods and shorter fallows, the predominant manioc landraces in these soils were generally not genetically similar. Rather, predominant landraces in each of these two fertile soils have emerged from separate selective trajectories which produced landraces that converged for fast-maturing low-starch traits adapted to intensified swidden systems in fertile soils. This contrasts with the more extensive cultivation systems found in the two poorer soils at different localities, characterized by the prevalence of slow-maturing high-starch landraces, longer cropping periods and longer fallows, typical of previous studies. Farmers plant different assemblages of bitter manioc landraces in different soils and the most popular landraces were shown to exhibit significantly different yields when planted in different soils. Farmers have selected different sets of landraces with different perceived agronomic characteristics, along with different fallow lengths, as adaptations to the specific properties of each agroecological micro-environment. These findings open up new avenues for research and debate concerning the origins, evolution, history and contemporary cultivation of bitter manioc in Amazonia and beyond.

Aerial Rivers and Lakes: Looking at Large-Scale Moisture Transport and Its Relation to Amazonia and to Subtropical Rainfall in South America

This is an observational study of the large-scale moisture transport over South America, with some analyses on its relation to subtropical rainfall. The concept of aerial rivers is proposed as a framework: it is an analogy between the main pathways of moisture flow in the atmosphere and surface rivers. Opposite to surface rivers, aerial rivers gain (lose) water through evaporation (precipitation). The magnitude of the vertically integrated moisture transport is discharge, and precipitable water is like the mass of the liquid column-multiplied by an equivalent speed it gives discharge. Trade wind flow into Amazonia, and the north/northwesterly flow to the subtropics, east of the Andes, are aerial rivers. Aerial lakes are the sections of a moisture pathway where the flow slows down and broadens, because of diffluence, and becomes deeper, with higher precipitable water. This is the case over Amazonia, downstream of the trade wind confluence. In the dry season, moisture from the aerial lake is transported northeastward, but weaker flow over southern Amazonia heads southward toward the subtropics. Southern Amazonia appears as a source of moisture to this flow. Aerial river discharge to the subtropics is comparable to that of the Amazon River. The variations of the amount of moisture coming from Amazonia have an important effect over the variability of discharge. Correlations between the flow from Amazonia and subtropical rainfall are not strong. However, some months within the set of dry seasons observed showed a strong increase (decrease) occurring together with an important increase (decrease) in subtropical rainfall.

CHARACTERIZATION AND CLASSIFICATION OF SOILS IN THE TAQUARI RIVER BASIN - PANTANAL REGION, STATE OF MATO GROSSO DO SUL, BRAZIL

Among the soils in the Mato Grosso do Sul, stand out in the Pantanal biome, the Spodosols. Despite being recorded in considerable extensions, few studies aiming to characterize and classify these soils were performed. The purpose of this study was to characterize and classify soils in three areas of two physiographic types in the Taquari river basin: bay and flooded fields. Two trenches were opened in the bay area (P1 and P2) and two in the flooded field (P3 and P4). The third area (saline) with high sodium levels was sampled for further studies. In the soils in both areas the sand fraction was predominant and the texture from sand to sandy loam, with the main constituent quartz. In the bay area, the soil organic carbon in the surface layer (P1) was (OC) > 80 g kg(-1), being diagnosed as Histic epipedon. In the other profiles the surface horizons had low OC levels which, associated with other properties, classified them as Ochric epipedons. In the soils of the bay area (P1 and P2), the pH ranged from 5.0 to 7.5, associated with dominance of Ca2+ and Mg2+, with base saturation above 50 % in some horizons. In the flooded fields (P3 and P4) the soil pH ranged from 4.9 to 5.9, H+ contents were high in the surface horizons (0.8-10.5 cmol(c) kg(-1)), Ca2+ and Mg-2 contents ranged from 0.4 to 0.8 cmol(c) kg(-1) and base saturation was < 50 %. In the soils of the bay area (P1 and P2) iron was accumulated (extracted by dithionite - Fed) and OC in the spodic horizon; in the P3 and P4 soils only Fed was accumulated (in the subsurface layers). According to the criteria adopted by the Brazilian System of Soil Classification (SiBCS) at the subgroup level, the soils were classified as: P1: Organic Hydromorphic Ferrohumiluvic Spodosol. P2: Typical Orthic Ferrohumiluvic Spodosol. P3: Typical Hydromorphic Ferroluvic Spodosol. P4: Arenic Orthic Ferroluvic Spodosol.

How far can we go in simplifying biomonitoring assessments? An integrated analysis of taxonomic surrogacy, taxonomic sufficiency and numerical resolution in a megadiverse region

The need for biodiversity conservation is increasing at a rate much faster than the acquisition of knowledge of biodiversity, such as descriptions of new species and mapping species distributions. As global changes are winning the race against the acquisition of knowledge, many researchers resort to the use of surrogate groups to aid in conservation decisions. Reductions in taxonomic and numerical resolution are also desirable, because they could allow more rapid the acquisition of knowledge while requiring less effort, if little important information is lost. In this study, we evaluated the congruence among 22 taxonomic groups sampled in a tropical forest in the Amazon basin. Our aim was to evaluate if any of these groups could be used as surrogates for the others in monitoring programs. We also evaluated if the taxonomic or numerical resolution of possible surrogates could be reduced without greatly reducing the overall congruence. Congruence among plant groups was high, whereas the congruence among most animal groups was very low, except for anurans in which congruence values were only slightly lower than for plants. Liana (Bignoniaceae) was the group with highest congruence, even using genera presence-absence data. The congruence among groups was related to environmental factors, specifically the clay and phosphorous contents of soil. Several groups showed strong spatial clumping, but this was unrelated to the congruence among groups. The high degree of congruence of lianas with the other groups suggests that it may be a reasonable surrogate group, mainly for the other plant groups analyzed, if soil data are not available. Although lianas are difficult to count and identify, the number of studies on the ecology of lianas is increasing. Most of these studies have concluded that lianas are increasing in abundance in tropical forests. In addition to the high congruence, lianas are worth monitoring in their own right because they are sensitive to global warming and the increasing frequency and severity of droughts in tropical regions. Our findings suggest that the use of data on surrogate groups with relatively low taxonomic and numerical resolutions can be a reliable shortcut for biodiversity assessments, especially in megadiverse areas with high rates of habitat conversion, where the lack of biodiversity knowledge is pervasive. (c) 2012 Elsevier Ltd. All rights reserved.

Biogeographic and diversification patterns of Neotropical Troidini butterflies (Papilionidae) support a museum model of diversity dynamics for Amazonia

Background: The temporal and geographical diversification of Neotropical insects remains poorly understood because of the complex changes in geological and climatic conditions that occurred during the Cenozoic. To better understand extant patterns in Neotropical biodiversity, we investigated the evolutionary history of three Neotropical swallowtail Troidini genera (Papilionidae). First, DNA-based species delimitation analyses were conducted to assess species boundaries within Neotropical Troidini using an enlarged fragment of the standard barcode gene. Molecularly delineated species were then used to infer a time-calibrated species-level phylogeny based on a three-gene dataset and Bayesian dating analyses. The corresponding chronogram was used to explore their temporal and geographical diversification through distinct likelihood-based methods. Results: The phylogeny for Neotropical Troidini was well resolved and strongly supported. Molecular dating and biogeographic analyses indicate that the extant lineages of Neotropical Troidini have a late Eocene (33-42 Ma) origin in North America. Two independent lineages (Battus and Euryades + Parides) reached South America via the GAARlandia temporary connection, and later became extinct in North America. They only began substantive diversification during the early Miocene in Amazonia. Macroevolutionary analysis supports the "museum model" of diversification, rather than Pleistocene refugia, as the best explanation for the diversification of these lineages. Conclusions: This study demonstrates that: (i) current Neotropical biodiversity may have originated ex situ; (ii) the GAARlandia bridge was important in facilitating invasions of South America; (iii) colonization of Amazonia initiated the crown diversification of these swallowtails; and (iv) Amazonia is not only a species-rich region but also acted as a sanctuary for the dynamics of this diversity. In particular, Amazonia probably allowed the persistence of old lineages and contributed to the steady accumulation of diversity over time with constant net diversification rates, a result that contrasts with previous studies on other South American butterflies.