Characterization of White bream virus reveals a novel genetic cluster of nidoviruses.

The order Nidovirales comprises viruses from the families Coronaviridae (genera Coronavirus and Torovirus), Roniviridae (genus Okavirus), and Arteriviridae (genus Arterivirus). In this study, we characterized White bream virus (WBV), a bacilliform plus-strand RNA virus isolated from fish. Analysis of the nucleotide sequence, organization, and expression of the 26.6-kb genome provided conclusive evidence for a phylogenetic relationship between WBV and nidoviruses. The polycistronic genome of WBV contains five open reading frames (ORFs), called ORF1a, -1b, -2, -3, and -4. In WBV-infected cells, three subgenomic RNAs expressing the structural proteins S, M, and N were identified. The subgenomic RNAs were revealed to share a 42-nucleotide, 5' leader sequence that is identical to the 5'-terminal genome sequence. The data suggest that a conserved nonanucleotide sequence, CA(G/A)CACUAC, located downstream of the leader and upstream of the structural protein genes acts as the core transcription-regulating sequence element in WBV. Like other nidoviruses with large genomes (>26 kb), WBV encodes in its ORF1b an extensive set of enzymes, including putative polymerase, helicase, ribose methyltransferase, exoribonuclease, and endoribonuclease activities. ORF1a encodes several membrane domains, a putative ADP-ribose 1"-phosphatase, and a chymotrypsin-like serine protease whose activity was established in this study. Comparative sequence analysis revealed that WBV represents a separate cluster of nidoviruses that significantly diverged from toroviruses and, even more, from coronaviruses, roniviruses, and arteriviruses. The study adds to the amazing diversity of nidoviruses and appeals for a more extensive characterization of nonmammalian nidoviruses to better understand the evolution of these largest known RNA viruses.

Predatory interactions between the invasive amphipod Gammarus tigrinus and the native opossum shrimp Mysis relicta

The invasive North American amphipod Gammarus tigrinus is successfully established in Lough Neagh, Northern Ireland. Gammarus tigrinus is increasingly recognized as having significant predatory impacts on macroinverebrates, contrary to the accepted functional feeding group status of Gammarus species. The native opossum shrimp Mysis relicta overlaps in habitat use with G. tigrinus. However, its interaction with benthic macroinvertebrates is rarely appreciated. Mutual predatory interactions between G. tigrinus and M. relicta were assessed in a series of laboratory experiments. Gammarus tigrinus actively preyed on adult and juvenile M. relicta at a range of spatial scales. Females and recently molted M. relicta were particularly vulnerable to predation. Mysis relicta did not prey on adult G. tigrinus, but rapidly eliminated juvenile G. tigrinus in microcosms. Changes in dissolved 02 saturation did not alter the predatory interaction between these species. Microhabitat use by M. relicta was altered in the presence of G. tigrinus, and the presence of G. tigrinus facilitated fish predation on M. relicta. A balance of mutual predatory pressure between these invasive and native species may explain their coexistence. Both species are likely to be strongly interactive with other macroinvertebrates in both native and invasive ranges.

SDSS J150722.30+523039.8: a cataclysmic variable formed directly from a detached white dwarf/brown dwarf binary?

We present high-speed, three-colour photometry of the eclipsing cataclysmic variable SDSS J150722.30+523039.8 (hereafter SDSS J1507). This system has an orbital period of 66.61 min, placing it below the observed `period minimum' for cataclysmic variables. We determine the system parameters via a parametrized model of the eclipse fitted to the observed lightcurve by ?2 minimization. We obtain a mass ratio of q = 0.0623 +/- 0.0007 and an orbital inclination . The primary mass is Mw = 0.90 +/- 0.01Msolar. The secondary mass and radius are found to be Mr = 0.056 +/- 0.001Msolar and Rr = 0.096 +/- 0.001Rsolar, respectively. We find a distance to the system of 160 +/- 10pc. The secondary star in SDSS J1507 has a mass substantially below the hydrogen burning limit, making it the second confirmed substellar donor in a cataclysmic variable. The very short orbital period of SDSS J1507 is readily explained if the secondary star is nuclearly evolved, or if SDSS J1507 formed directly from a detached white dwarf/brown dwarf binary. Given the lack of any visible contribution from the secondary star, the very low secondary mass and the low HeI ?6678/Ha emission-line ratio, we argue that SDSS J1507 probably formed directly from a detached white dwarf/brown dwarf binary. If confirmed, SDSS J1507 will be the first such system identified. The implications for binary star evolution, the brown dwarf desert and the common envelope phase are discussed.

Do All Flares Have White-Light Emission?

High-cadence, multiwavelength optical observations of a solar active region (NOAA AR 10969), obtained with the Swedish Solar Telescope, are presented. Difference imaging of white light continuum data reveals a white-light brightening, 2 minutes in duration, linked to a cotemporal and cospatial C2.0 flare event. The flare kernel observed in the white-light images has a diameter of 300 km, thus rendering it below the resolution limit of most space-based telescopes. Continuum emission is present only during the impulsive stage of the flare, with the effects of chromospheric emission subsequently delayed by approximate to 2 minutes. The localized flare emission peaks at 300% above the quiescent flux. This large, yet tightly confined, increase in emission is only resolvable due to the high spatial resolution of the Swedish Solar Telescope. An investigation of the line-of-sight magnetic field derived from simultaneous MDI data shows that the continuum brightening is located very close to a magnetic polarity inversion line. In addition, an Ha flare ribbon is directed along a region of rapid magnetic energy change, with the footpoints of the ribbon remaining cospatial with the observed white-light brightening throughout the duration of the flare. The observed flare parameters are compared with current observations and theoretical models for M- and X-class events and we determine the observed white-light emission is caused by radiative back-warming. We suggest that the creation of white-light emission is a common feature of all solar flares.