Potencial de uso da erva medicinal Cybopogon citratus no controle de fitopatógenos do feijoeiro e plantas daninhas em áreas irrigadas.

Para avaliar a erva medicinal Cymbopogon citratus (capim-limao) no controle de fitopatogenos e de plantas daninhas em feijoeiro, foram instalados experimentos utilizando diferentes subprodutos da planta. O oleo essencial de C. citratus a 10% obtido de folhas inibiu totalmente o crescimento micelial de Fusarium solani f. sp phaseoli, Sclerotinia sclerotiorum e Rhizoctonia solani, ao passo que Sclerotium rolfsii apresentou-se menos sensivel, apesar da substancia reduzir significativamente o diametro medio das colonias do fungo. Tambem o oleo de C. citratus a 10% promoveu inibicao total da germinacao de sementes de Digitaria horizontalis (capim-colchao), Sorghum halepense (capim-massambara), Bidens pilosa (picao-preto), Euphorbia heterophylla (amendoim-bravo, leiteiro) e Raphanus raphanistrum (nabica). O oleo inibiu parcialmente a germinacao de Echinochloa crusgalli (capim-arroz) e nao afetou a germinacao de Portulaca oleracea (beldroega). Em casa de vegetacao, o oleo de folhas a 10% afetou a emergencia do feijoeiro, enquanto o po (folha seca moida) incrementou a emergencia para 97% contra 75% e 88% em solos infestados com R. solani e F. solani, respectivamente. Em condicoes de campo, observou-se reducao da incidencia de F. solani e R. solani nas parcelas tratadas com suspensao aquosa de oleo de C. citratus a 1% e 5% no sulco de plantio e em tratamento de sementes a 0,5%. A analise da producao nao evidenciou diferencas significativas entre os tratamentos. Para verificar o efeito da combinacao do uso de C. citratus e da reducao de doses dos herbicidas, foram ultilizados os herbicidas pos-emergentes fomesafen e fenoxaprop-etil nas doses usadas pelo produtor (0,619 l ia/ha de cada produto) e a 80% destas doses. As especies de plantas daninhas predominantes foram: P. oleracea, Eleusine indica (capim-pe-de-galinha) e Amaranthus deflexus (caruru).

Searching for novel targets to control wheat Head Blight Disease-I-Protein identification, 3D modeling and virtual screening.

2016

Combined effects of soil biotic and abiotic factors, influenced by sewage sludge incorporation, on the incidence of corn stalk rot.

Abstract: The objectives of this study were to evaluate the combined effects of soil bioticand abiotic factors on the incidence of Fusarium corn stalk rot, during four annual incorporations of two typesofsewagesludge intosoil ina 5-years field assay under tropical conditions and topredict the effectsof these variables on the disease. For each type of sewage sludge, the following treatments were included: control with mineral fertilization recommended for corn; control without fertilization; sewage sludge based on the nitrogen concentration that provided the same amount of nitrogen as in the mineral fertilizer treatment; and sewage sludge that provided two, four and eight times the nitrogen concentration recommended for corn. Increasing dosages of both types of sewage sludge incorporated into soil resulted in increased corn stalk rot incidence, being negatively correlated with corn yield. A global analysis highlighted the effect of the year of the experiment, followed by the sewage sludge dosages. The type of sewage sludge did not affect the disease incidence. Amultiple logistic model using a stepwise procedure was fitted based on the selection of a model that included the three explanatory parameters for disease incidence: electrical conductivity, magnesium and Fusarium population. In the selected model, the probability of higher disease incidence increased with an increase of these three explanatory parameters. When the explanatory parameters were compared, electrical conductivity presented a dominant effect and was the main variable to predict the probability distribution curves of Fusarium corn stalk rot, after sewage sludge application into the soil.

Studies of sustainable strategies to control phytopathogen agents

Choosing natural enemies to suppress pest population has been for a long the key of biological control. Overtime the term biological control has also been applied to the use of suppressive soils, bio-disinfection and biopesticides. Biological control agents (BCA) and natural compounds, extracted or fermented from various sources, are the resources for containing phytopathogens. BCA can act through direct antagonism mechanisms or inducing hypovirulence of the pathogen. The first part of the thesis focused on mycoviruses infecting phytopathogenic fungi belonging to the genus Fusarium. The development of new approaches capable of faster dissecting the virome of filamentous fungi samples was performed. The semiconductor-based sequencer Ion Torrent™ and the nanopore-based sequencer MinION have been exploited to analyze DNA and RNA referable to viral genomes. Comparison with GeneBank accessions and sequence analysis allowed to identify more than 40 putative viral species, some of these mycovirus genera have been studied as inducers of hypovirulence in several phytopathogenic fungi, therefore future works will focus on the comparison of the morphology and physiology of the fungal strain infected and cured by the viruses identified and their possible use as a biocontrol agent. In a second part of the thesis the potential of botanical pesticides has been evaluated for the biocontrol of phloem limited phytopathogens such as phytoplasmas. The only active compounds able to control phytoplasmas are the antibiotic oxytetracyclines and in vitro direct and fast screening of new antimicrobials compounds on media is almost impossible due to the difficulty to culture phytoplasmas. For this reason, a simple and reliable screening method was developed to evaluate the effects of antimicrobials directly on phytoplasmas by an “ex-vivo” approach. Using scanning electron microscopy (SEM) in parallel with molecular tools (ddRT-PCR), the direct activity of tetracyclines on phytoplasma cells was verified, identifying also a promising compound showing similar activity.

Identification of resistance factors to the main wheat diseases in the Mediterranean area

Several diseases challenge bread and durum wheat productions worldwide. The importance of these cereals requires adequate protection to pathogens that can cause strong yield and grain quality losses. The main work of this thesis was related to phenotype GDP (Global Durum Panel) in the Mediterranean region (Italy, Egypt, Lebanon, Morocco and Turkey) and Argentina across three years (2019-2021) for yellow rust resistance (infection type and severity). GWAS shows in particular, loci in chromosome 1B, 2B, 4B, 5A, 6A, 7B showed high significance across nurseries/years, with various patterns of GxE. The second chapter is about Zymoseptoria tritici, agent of STB (Septoria Tritici Blotch), a foliar pathogen that yearly causes high damages if not controlled. In recent years research in durum wheat breeding is focused on the identification of novel, underexploited resistance genes to be subsequently and conveniently moved into the pre-breeding and breeding stream. The plants were phenotyped for disease height characters, infection type at the flag leaf and infection type at the level of the canopy below the flag leaf. This experiment opens up a rich scenario of analysis and opportunities to investigate and discover new loci of resistance to STB. Third chapter is about Fusarium head blight (FHB) is a fungal disease caused by pathogens belonging to the genus Fusarium. In particular, Fusarium culmorum and Fusarium graminearum species cause severe grain yield losses and accumulation of mycotoxins in wheat that compromise food safety. Over 250 QTL/genes for FHB resistance have been identified in bread wheat, such as Fhb 1 and Fhb 5 but only a small number of FHB resistance loci have been mapped in durum wheat. The aim of this work is to find loci of partial resistance to FHB already present in durum and bread wheat germplasm and therefore easily cumulative.