A new species of the genus Tor from Yunnan, China (Teleostei : Cyprinidae)

A new species of the subfamily Barbinae, Tor yingjiangensis, is recognized from Yunnan province, China. It can be distinguished from other Tor species by the following combination of characters: last simple dorsal-fin ray osseous and non-serrated; no forward directed predorsal procumbent spine; head length considerably longer than body depth; no tubercles on the snout or sides of the face; 18-20 gill rakers on the outside of first gill arch; 24-26 lateral line scales; median lobe of lower lip short, its posterior margin truncate, not extending to the vertical across the inner corners of the mouth; and the condition of the lower lip consistent in individuals of different sizes. The new species has been misidentified previously as Tor putitora (Hamilton, F. 1822. An account of the fishes found in the River Ganges and its Branches. Edinburgh & London. 405 pp), which occurs in the Ganges and Indus River basins. The new species can easily be distinguished from T. putitora by having 3-3.5 (vs. 2.5) scales from lateral line to pelvic-fin origin, shorter caudal peduncle length (13.0% vs. 17.2% of standard length), lesser body depth (26.4% vs. 24.0% of standard length) and longer caudal peduncle depth (12.0% vs. 10.9% of standard length), no longitudinal stripe present along side of body, and eyes visible in ventral view of head.

Gene duplication in the genome of parasitic Giardia lamblia

Background: Giardia are a group of widespread intestinal protozoan parasites in a number of vertebrates. Much evidence from G. lamblia indicated they might be the most primitive extant eukaryotes. When and how such a group of the earliest branching unicellular eukaryotes developed the ability to successfully parasitize the latest branching higher eukaryotes (vertebrates) is an intriguing question. Gene duplication has long been thought to be the most common mechanism in the production of primary resources for the origin of evolutionary novelties. In order to parse the evolutionary trajectory of Giardia parasitic lifestyle, here we carried out a genome-wide analysis about gene duplication patterns in G. lamblia. Results: Although genomic comparison showed that in G. lamblia the contents of many fundamental biologic pathways are simplified and the whole genome is very compact, in our study 40% of its genes were identified as duplicated genes. Evolutionary distance analyses of these duplicated genes indicated two rounds of large scale duplication events had occurred in G. lamblia genome. Functional annotation of them further showed that the majority of recent duplicated genes are VSPs (Variant-specific Surface Proteins), which are essential for the successful parasitic life of Giardia in hosts. Based on evolutionary comparison with their hosts, it was found that the rapid expansion of VSPs in G. lamblia is consistent with the evolutionary radiation of placental mammals. Conclusions: Based on the genome-wide analysis of duplicated genes in G. lamblia, we found that gene duplication was essential for the origin and evolution of Giardia parasitic lifestyle. The recent expansion of VSPs uniquely occurring in G. lamblia is consistent with the increment of its hosts. Therefore we proposed a hypothesis that the increment of Giradia hosts might be the driving force for the rapid expansion of VSPs.

Impacts of fishing gears, fishing methods and fishing effort in the fisheries of Lake Victoria and proposals for management

The initial subsistence fisheries of Lake Victoria were dominated by two indigenous tilapiines, Oreochromis esculentus (Graham 1929) and Oreochromis variabilis Boulenger 1906, exploited with simple fishing crafts and gears that had little impact on the fish stocks (Jackson 1971). Commercial fisheries, targeting the tilapia fishery, started at the beginning of the 20th Centurywhen cotton flax gillnets were first introduced in 1905 into the Nyanza Gulf in Kenya. Gillnets were quickly adopted around the whole lake and consequently, the native methods of fishing soon died out (Jackson 1971). Following the introduction of gillnets, fishing boats and their propulsion methods were also improved. These improvements in fishing capacity coincided with development of urban centres and increasing human population around the lake, which increased the demand for fishery products. To satisfy the increasing demand, fishing effort increased greatly during the 20th century, despite the decline of catch per unit of effort (CPUE) (Jackson 1971; Ogutu-Ohwayo 1990). The initial catch rates of 127mm (5 inch) mesh size gill nets in the tilapia-based fishery, in 1905, was in the range of 50 to 100 fish per gillnet of approximately 50 m in length. However, twenty years later, the catch rates of gillnets of the same mesh size had declined to about six fish per net and gillnets of smaller mesh sizes, which had better catch rates, had been introduced suggesting overfishing (Worthington and Worthington, 1933).

Wetlands and riparian zones as buffers and critical habitats for biotic communities in Lake Victoria

Despite their ecological and socio-economic importance, Lake Victoria's adjoining "swamps" and lake interface are among the least investigated parts of the lake. The "swamps" a term commonly equated to "wastelands" and the difficult working environment they present in comparison to open water, are major factors for the low level of attention accorded to shoreline wetlands. Moreover, definitions of wetlands highlighted for example in the Ramsar Convention as "areas of marsh, fern, peatland or water, whether natural or artificial, permanent or temporary, with water that is static or flowing, fresh or brackish, or salt, including areas of marine water, the depth of which does not exceed six metres" (Ramsar, 1971) were designed to protect birds (water fowl) of international importance. The Ramsar definition, which also includes oceans, has till recently been of limited use for Lake Victoria, because itdoes not fully recognise wetlands in relation to other public concerns such as water quality, biodiversity and the tisheries that are of higher socioeconomic priority than waterfowl. Prior to 1992, fishery research on Lake Victoria included studies of inshore shallow habitats of the lake without specific reference to distance or the type of vegetation at the shore. Results of these studies also conveniently relied heavily on trawl and gill net data from the 5-10 m depth zones as the defining boundary of shallow inshore habitats. In Lake Victoria, such a depth range can be at least one kilometre from the lake interface and by the 10m depth contour, habitats are in the sub-littoral range. Findings from these studies could thus not be used to make direct inferences on the then assumed importance of Lake Victoria wetlands in general.

The decline of Alestes baremose Boulenger, 1901 and Hydrocynus forskahlii (Cuvier, 1819) stocks in Lake Albert: implications for sustainable management of their fisheries

The fish stocks of Lake Albert face immense exploitation pressure which has led to “fishingdown” of their fisheries, with some larger species having been driven to near-extinction, while others such as Citharinus citharus have almost disappeared. Both A. baremose (Angara) and H. forskahlii (Ngassia) historically formed the most important commercial species in Lake Albert until the early 2000s but recent Catch Assessment Surveys (2007-2013) revealed a sweeping decline in their contribution to the commercial catch from 72.7% in 1971 to less than 6% in 2013. The catch per unit effort also registered a two-fold decline from 45.6 and 36.1 kg/boat/day to 22.6 and 18.1 kg/boat/day for A. baremose and H. forskahlii respective between 1971 and 2007. Over 50% of illegal gillnets, below the legal minimum limit of four inches (101.6 mm) used on Lake Albert target the two species. Gillnet experiments found the three inch (76.2 mm) gill net mesh size suitable for sustained harvest of the two species. The study concludes that optimal utilization of the two species and probably other non target fish species is achievable through species specific management strategies, coupling species specific licensing, and controlling harvest of juvenile individuals, overall fishing effort and fish catch on Lake Albert and protecting the vulnerable fish habitats.

Fishing gear selectivity of Lates niloticus L. (Nile perch), Oreochromis niloticus L. (Nile tilapia) and Rastrineobola argentea Pellegrin (Mukene) in lakes Victoria, Kyoga and Nabugabo

Catch effort data on which fisheries management regulations are sometimes based are not available for most lakes in Uganda. However, failure to regulate fishing gears and methods has been a major cause of collapse of fisheries in the country. Fisheries have been damaged by destructive and non-selective fishing gears and methods such as trawling and beach seining, by use of gill nets of mesh size which crop immature fish and by introduction of mechanised fishing. Selectivity of the gears used to crop Lates niloticus 1. (Nile perch), Oreochromis niloticus 1. (Nile tilapia) and Rastrineobola argentea (Mukene) which are currently the most important commercial species in Uganda were examined in order to recommend the most suitable types, sizes and methods that should be used in exploiting these fisheries . Gill nets of less than 127 mm mainly cropped immature Nile ti1apia and Nile perch. To protect these fisheries, the minimum mesh size of gill nets should be set at 127 mm. Seine nets of 5 mm do catch high proportions of immature Mukene while those of 10 mm catch mainly mature Mukene. When operated inshore, both sizes catch immature Nile perch and Nile ti1apia as by-catch. To protect the Mukene fishery and avoid catching immature byecatch, a minimum mesh size of the Mukene net should have been 10 mm operated as Lampara type net offshore but since most fishennen have been using the 5 mm seine for over five years the minimum size should not be allowed to drop below 5 mm pending further thorough investigations. Beach seining, trawling and are destructive to fisheries and should be prohibited until data that may justify their use is available.

The biology, ecology, population parameters and the fishery of the Nile tilapia, Oreochromis niloticus (L)

Oreochromis niloticus (the Nile tilapia) and three other ti1apine species: Oreochromis leucostictus, Tilapia zi11ii and T. rendallii were introduced into Lakes Victoria, Kyoga and Nabugabo in 1950s and 1960s. The source and foci of the stockings are given by Welcomme (1966) but the origin of the stocked species was Lake Albert. The Nile tilapia was introduced as a management measure to relieve fishing pressure on the endemic tiapiines and, since it grows to a bigger size, to encourage a return to the use of larger mesh gill nets. Ti1apia zillii was introduced to fill a vacant ,niche of macrophytes which could not be utilised' by the other tilapiines. Tilapia rendallii, and possibly T. leucosticutus could been introduced into these lakes accidently as a consquence of one of the species being tried out for aquaculture. The Nile perch and Nile tilapia have since fully established themselves and presently dominate the commercial fisheries of Lakes Victoria and Kyoga. The original fisheries based on the endemic tilapiines O. escu1entus and o. variabilis have collapsed. It is hypothesized that the ecological and limnological changes that are observed in Lakes Victoria and Kyoga are due to a truncation of the original food webs of the two lakes. Under the changed conditions, O. niloticus to be either playing a stabilizing role or fuelling nutrient turnover in the lakes. Other testable hypotheses point to the possible role of predation by the Nile perch, change in regional climate and hydrology in the lake basins.

The impact of fishing gears and methods: with recommendations for management of the fisheries of Lakes Victoria, Kyoga and Nabugabo

Historical analysis has shown that use of destructive fishing gears and methods contributed much to the initial depletion of fish stocks from Lakes Victoria and Kyoga. From about 1930 to 1960, the fisheries of Lake Victoria were managed by controlling the mesh size of gill nets. Gill net s of less than 127 mm (5) stretched mesh had been prohibited on Lake Victoria because they cropped immature Oreochromis esculentus (Ngege) which were at that time the most important commercial species. When the mesh size restriction was repealed in the Ugandan, Tanzanian and Kenya, there was a shift to smaller meshes which cropped immature tilapia and other large species and led to a collapse in the fishery.

A discussion of possible management methods to revive the Labeo victorianus fishery of Lake Victoria, with special reference to the Nzoia river, Kenya

Labeo victorianus Boulenger, the "ningu", is commercially the most important migratory fish of Lake Victoria, as well as being one of the most abundant of all species landed. Annual catch records of the Fisheries Departments of Uganda, Kenya and Tanzania show that a high yielding seasonal, floating gill net fishery is based on the concentration of sexually mature fish at the river mouths at the time of migration during the bi-annual floods. Migrating fish used also to be caught in high numbers at "kek" barrier traps across the river, as at Hainga on the Nzoia river. Since the heavy exploitation at the river mouth which occurred with the introduction of nylon gill nets in 1956.

Report of Lake Wamala fisheries frame survey 2012

Lake Wamala, a small lake (180 km2) located in Central Uganda and believed to have been part of the main Lake Victoria and only got separated about 4000 years ago, has already undergone different levels of fisheries evolution that warrant using it as a case study to inform changes in other systems. Using resources provided by the Lake Victoria Environmental Management Project (LVEMP) II, under the Applied Research Facility, we evaluated the fishing inputs, socio-economic infrastructure and analyzed trends in fishery benefits to guide evolution of management advice. A frame survey was conducted on the entire lake (13th - 23rd March 2012) enumerating all fishing factors and enlisting available and accessible socio-economic infrastructure along the shores of the lake. The lake traverses districts (Gomba, Mityana, and Mubende) with its largest portion lying in Mityana. There are 26 established fish landing sites and about 600 fishers with a similar number of boats on the lake. The total number of boats on the lake is almost equal to the number of fishers; illustrating the common type (paracute) and size (Small, about 4 m) of boats and hence a fishing crew structure of one fisher per boat. Main fishing gears are Gillnets targeting the tilapia (Ngege) and long line hooks (Protperus, Mamba, and Clarias, Male). Almost equal number of boats used the two main gears on the lake (about 300 each). 97% of the gill nets on the lake are small (3.5” (8.9 cm – 4.5” – 11.4 cm) stretched mesh size while 98% of the hoots are large (< size 10). The implication is gill net fishers target small tilapia while long line fishers aim at the large mamba and male. Generally the lake has poor socio-economic infrastructure compared to other lakes of Uganda probably due to its geo-morphological setting. The lakes fishing factors have continued to expand with the ever increasing population. There may be need to check the continued entry into the fisheries especially if the increasing effort does not translate into increase in fishery yield.

Fishery resource assessment and monitoring in the development and control of fisheries in the Lake Volta

Gill-netting and rotenoning have been used for assessing and monitoring fish stock abundance in Volta Lake. The lake and the main gear types used on it have been described. Before a gill-net sampling plan was set up, a preliminary survey was undertaken which largely determined the final form of the plan. An investigation as to whether or not the lake was being overfished concluded that it was being underfished. Commercial and experimental catch data analyses disclosed that the adults of the small species were being little utilized. Commercial sized species were also not being harvested according to their apparent proportion in the population. Production is presently fluctuating between approximately 37,000 and 40,000 tonnes. A high correlation between commercial and experimental catch was realized. Developments which have followed in the wake of stock assessment and monitoring studies include: introduction of monofilament nylon net, development of a special scoop net to permit mass harvest of clupeids after they have been attracted to light, and the design of a larger canoe which would help to extend the fishery into open water. New regulation and management policies will have to be formulated in the light of new findings before a rational exploitation of all the species can be achieved.

Some major unsolved aspects of the dynamics of African fisheries as related to questions of rational development and management

Studies of fish and fisheries in Africa fall in to four phases: the period of fisheries expeditions, ecological investigations, the development phase, and the period of mechanized exploitation. There is need to establish the taxonomic status and ecology of the varied components of the potentially important Haplochromis in Lake Victoria. A comprehensive study of their bionomics and life history, population structure, natality, recruitment and mortality coefficients should be undertaken. Emphasis lo be laid on the study of the ecology, especially breeding behaviour of the economically important c1upeids (Stolothrissa tanganciae and Limnothrissa miodon), in Lake Tanganyika. A comprehensive investigation into the migratory and shoaling behaviour of the Lake Victoria Tilapia to be initiated. Pre-impoundment studies to be undertaken to assess effects of hydroelectric projects of fisheries. Studies on parasites of economically important fishes to be stepped up to assess pathological effects and the biological basis for their control. The role of predators, e.g., Hydrocyon, Lates and Micropterus salmoides in commercial fish populations should be evaluated, and the knowledge gaincd used to effectively manage the fisheries in favour of the more desirable fish stocks.

Approaches to the evaluation and management of the fish stock in Kainji Lake, Nigeria

Estimates of potential yield for Kainji Lake, and the methods of analysis by earlier workers are discussed. Also summarized is the state of the fishery after impoundment, between 1969 and 1971, based on experimental gillnet catches. Recent sampling of the young of the year along the littoral margin indicates that most of the commercially important species have spawned successful1y in the lake. An intense fishing mortality of juvenile fish, owing to the use of small mesh nets by local fishermen, presents a possible threat to the future establishment of the fish in the lake. The results of gill-net selection studies based on HOLT'S (1957) method are given. The data have been extracted from experimental gill-net catches with graded fleets of nets between 1969 and 1971. Recommendations based on the above studies have been made to ensure a successful establishment of the fish species in the lake and an increase in catch-per~unit effort in subsequent years.

Biological observations in Indian mackerel, Rastrelliger kanagurta (Cuvier) 1816, (Pisces: Scombridae) from East African waters

The present study was under taken to provide further and more detailed information on the apparent seasonal and relative abundance of the species, food and feeding habits. Spawning season and size composition. The incidence of parasites, in relation to the month of the year and the fish length, was also examined.