An investigation into observational characteristics of rainfall and temperature in Central Northeast India—a historical perspective 1889–2008

Mann–Kendall non-parametric test was employed for observational trend detection of monthly, seasonal and annual precipitation of five meteorological subdivisions of Central Northeast India (CNE India) for different 30-year normal periods (NP) viz. 1889–1918 (NP1), 1919–1948 (NP2), 1949–1978 (NP3) and 1979–2008 (NP4). The trends of maximum and minimum temperatures were also investigated. The slopes of the trend lines were determined using the method of least square linear fitting. An application of Morelet wavelet analysis was done with monthly rainfall during June– September, total rainfall during monsoon season and annual rainfall to know the periodicity and to test the significance of periodicity using the power spectrum method. The inferences figure out from the analyses will be helpful to the policy managers, planners and agricultural scientists to work out irrigation and water management options under various possible climatic eventualities for the region. The long-term (1889–2008) mean annual rainfall of CNE India is 1,195.1 mm with a standard deviation of 134.1 mm and coefficient of variation of 11%. There is a significant decreasing trend of 4.6 mm/year for Jharkhand and 3.2 mm/day for CNE India. Since rice crop is the important kharif crop (May– October) in this region, the decreasing trend of rainfall during themonth of July may delay/affect the transplanting/vegetative phase of the crop, and assured irrigation is very much needed to tackle the drought situation. During themonth of December, all the meteorological subdivisions except Jharkhand show a significant decreasing trend of rainfall during recent normal period NP4. The decrease of rainfall during December may hamper sowing of wheat, which is the important rabi crop (November–March) in most parts of this region. Maximum temperature shows significant rising trend of 0.008°C/year (at 0.01 level) during monsoon season and 0.014°C/year (at 0.01 level) during post-monsoon season during the period 1914– 2003. The annual maximum temperature also shows significant increasing trend of 0.008°C/year (at 0.01 level) during the same period. Minimum temperature shows significant rising trend of 0.012°C/year (at 0.01 level) during postmonsoon season and significant falling trend of 0.002°C/year (at 0.05 level) during monsoon season. A significant 4– 8 years peak periodicity band has been noticed during September over Western UP, and 30–34 years periodicity has been observed during July over Bihar subdivision. However, as far as CNE India is concerned, no significant periodicity has been noticed in any of the time series.

Impact of Climatic Variability and Drought on Crop Yields in Kerala

In the present investigation, the impacts of the variability of the climatic parameters on the yields of major crops grown in the State are analyzed. In particular, the effects of rainfall variability on the water balances of the different regions in the State have been studied. Through this analysis the drought climatology of the region has been studied along with an overview of the climatic shifts involved in individual years. The relationship between weather parameters and crop yields over the State has been analyzed with case studies of two crops- coconut and paddy. Crop-weather models for forecasting coconut and paddy yields have been developed, which could be used for planning purposes

Potential public health significance of faecal contamination and multidrug-resistant Escherichia coli and Salmonella serotypes in a lake in India

To assess the prevalence of faecal coliform bacteria and multiple drug resistance among Escherichia coli and Salmonella serotypes from Vembanadu Lake. Study design: Systematic microbiological testing. Methods: Monthly collection of water samples were made from ten stations on the southern and northern parts of a salt water regulator constructed in Vembanadu Lake in order to prevent incursion of seawater during certain periods of the year. Density of faecal colifrom bacteria was estimated. E. coli and Salmonella were isolated and their different serotypes were identified. Antibiotic resistance analysis of E. coli and Salmonella serotypes was done and the MAR index of individual isolates was calculated. Results: Density of faecal coliform bacteria ranged from mean MPN value 2900 -7100/100ml. Results showed multiple drug resistance pattern among the bacterial isolates. E. coli showed more than 50% resistance to amickacin, oxytetracycline, streptomycin, tetracycline and kanamycin while Salmonella showed high resistance to oxytetracycline, streptomycin, tetracycline and ampicillin. The MAR indexing of the isolates showed that they have originated from high risk source such as humans, poultry and dairy cows. Conclusions: The high density of faecal coliform bacteria and prevalence of multi drug resistant E. coli and Salmonella serotypes in the lake may pose severe public health risk through related water borne and food borne outbreaks

Survival of multi-drug resistant enteropathogenic Escherichia coli and Salmonella paratyphi in Vembanadu lake as a function of saltwater barrier along southwest coast of India

The objective of the study was to evaluate the survival response of multi-drug resistant enteropathogenic Escherichia coli and Salmonella paratyphi to the salinity fluctuations induced by a saltwater barrier constructed in Vembanadu lake, which separates the lake into a freshwater dominated southern and brackish water dominated northern part. Therefore, microcosms containing freshwater, brackish water and microcosms with different saline concentrations (5, 10, 15, 20, 25 ppt) inoculated with E. coli/S. paratyphi were monitored up to 34 days at 20 and 30 WC. E. coli and S. paratyphi exhibited significantly higher (p <0.05) survival at 20 WC compared to 30 WC in all microcosms. Despite fresh/brackish water, E. coli and S. paratyphi showed prolonged survival up to 34 days at both temperatures. They also demonstrated better survival potential at all tested saline concentrations except 25 ppt where a significantly higher (p<0.0001) decay was observed. Therefore, enhanced survival exhibited by the multi-drug resistant enteropathogenic E. coli and S. paratyphi over a wide range of salinity levels suggest that they are able to remain viable for a very long time at higher densities in all seasons of the year in Vembanadu lake irrespective of saline concentrations, and may pose potential public health risks during recreational activities

Prevalence of multi drug resistant Escherichia coli serotypes in a tropical estuary,India

A toatal of 81 Escherichia coliisolates belonging to 43 different serotypes including several pathogenic strains such as enterotoxigenic E.coli isolated from a tropical estuary were tested against 12 antibiotics to determine the prevelance of multiple antibiotic resistance, antimicrobial resistance profiles and also to find out high risk source of contamination by MAR indexing.

Biofilm Forming Multi Drug Resistant Staphylococcus spp. Among Patients with Conjunctivitis

Biofilm forming multidrug resistant Staphylococcus spp. are major reservoirs for transmission of ophthalmic infections. They were isolated from ocular patients suffering from conjunctivitis. In this study we analyzed biofilm forming ability, antibiotic resistance profile of the Staphylococcus spp. isolated from clinical ocular patients, and their phylogenetic relationship with other community MRSA. Sixty Staphylococcus spp. strains isolated from clinical subjects were evaluated for their ability to form biofilm and express biofilm encoding ica gene. Among them 93% were slime producers and 87% were slime positive. Staphylococcus aureus and S. epidermidis were dominant strains among the isolates obtained from ocular patients. The strains also exhibited a differential biofilm formation quantitatively. Antibiotic susceptibility of the strains tested with Penicillin G, Ciprofloxacin, Ofloxacin, Methicillin, Amikacin, and Gentamicin indicated that they were resistant to more than one antibiotic. The amplicon of ica gene of strong biofilm producing S. aureus strains, obtained by polymerase chain reaction, was sequenced and their close genetic relationship with community acquired MRSA was analyzed based on phylogenetic tree. Our results indicate that they are genetically close to other community acquired MRSA

Sequential interactions of Silver-silica nanocomposite (Ag-SiO2NC) with cell wall, metabolism and genetic stability of Psedomonas aeruginosa, a multiple antibiotic resistant bacterium

The study was carried out to understand the effect of silver-silica nanocomposite (Ag-SiO2NC) on the cell wall integrity, metabolism and genetic stability of Pseudomonas aeruginosa, a multiple drugresistant bacterium. Bacterial sensitivity towards antibiotics and Ag-SiO2NC was studied using standard disc diffusion and death rate assay, respectively. The effect of Ag-SiO2NC on cell wall integrity was monitored using SDS assay and fatty acid profile analysis while the effect on metabolism and genetic stability was assayed microscopically, using CTC viability staining and comet assay, respectively. P. aeruginosa was found to be resistant to β-lactamase, glycopeptidase, sulfonamide, quinolones, nitrofurantoin and macrolides classes of antibiotics. Complete mortality of the bacterium was achieved with 80 μgml-1 concentration of Ag-SiO2NC. The cell wall integrity reduced with increasing time and reached a plateau of 70 % in 110 min. Changes were also noticed in the proportion of fatty acids after the treatment. Inside the cytoplasm, a complete inhibition of electron transport system was achieved with 100 μgml-1 Ag-SiO2NC, followed by DNA breakage. The study thus demonstrates that Ag-SiO2NC invades the cytoplasm of the multiple drug-resistant P. aeruginosa by impinging upon the cell wall integrity and kills the cells by interfering with electron transport chain and the genetic stability

Studies on metal resistant bacteria in cochin estuary and its response towards antibiotics and silver nanoparticles

The Cochin estuary (CE), which is one of the largest wetland ecosystems, extends from Thanneermukkam bund in the south to Azhikode in the north. It functions as an effluent repository for more than 240 industries, the characteristics of which includes fertilizer, pesticide, radioactive mineral processing, chemical and allied industries, petroleum refining and heavy metal processing industries (Thyagarajan, 2004). Studies in the CE have been mostly on the spatial and temporal variations in the physical, chemical and biological characteristics of the estuary (Balachandran et al., 2006; Madhu et al., 2007; Menon et al., 2000; Qasim 2003;Qasim and Gopinathan 1969) . Although several monitoring programs have been initiated in the CE to understand the level of heavy metal pollution, these were restricted to trace metals distribution (Balachandran et al., 2005) or the influence of anthropogenic inputs on the benthos and phytoplankton (Madhu et al., 2007;Jayaraj, 2006). Recently, few studies were carried out on microbial ecology in the CE(Thottathil et al 2008a and b;Parvathi et al., 2009and 2011; Thomas et al., 2006;Chandran and Hatha, 2003). However, studies on metal - microbe interaction are hitherto not undertaken in this estuary. Hence, a study was undertaken at 3 sites with different level of heavy metal concentration tounderstand the abundance, diversity and mechanisms of resistance in metal resistant bacteria and its impact on the nutrient regeneration. The present work has also focused on the response of heavy metal resistant bacteria towards antibacterial agent’s antibiotics and silver nanoparticles

A note about Triticum in Oman

Little is known about the diversity of wheat (Triticum spp.) in Oman. Results of a survey conducted in two remote mountain oases of northern Oman indicate that there exists considerable morphological variation within and among the five traditional landraces of wheat cultivated. Within two of the landraces grown on irrigated terraces, 2 sized between 2 and 100 m , two new botanical wheat varieties (Triticum aestivum var. baladseetense and var. maqtaense) were identified of which the agronomic properties, in particular tolerance to drought and heat, and the nutritional value require further investigation.

Low-altitude aerial photography for optimum N fertilization of winter wheat on the North China Plain

Previous research has shown that site-specific nitrogen (N) fertilizer recommendations based on an assessment of a soil’s N supply (mineral N testing) and the crop’s N status (sap nitrate analysis) can help to decrease excessive N inputs for winter wheat on the North China Plain. However, the costs to derive such recommendations based on multiple sampling of a single field hamper the use of this approach at the on-farm level. In this study low-altitude aerial true-color photographs were used to examine the relationship between image-derived reflectance values and soil–plant data in an on-station experiment. Treatments comprised a conventional N treatment (typical farmers’ practice), an optimum N treatment (N application based on soil–plant testing) and six treatments without N (one to six cropping seasons without any N fertilizer input). Normalized intensities of the red, green and blue color bands on the photographs were highly correlated with total N concentrations, SPAD readings and stem sap nitrate of winter wheat. The results indicate the potential of aerial photography to determine in combination with on site soil–plant testing the optimum N fertilizer rate for larger fields and to thereby decrease the costs for N need assessments.

Use of digital camera to assess nitrogen status of winter wheat in the Northern China Plain

The most widely used methods to assess the nitrogen (N) status of winter wheat (Triticum aestivum L.) are the determination of plant total N by combustion, the testing of nitrate in the leaf tissue and the use of SPAD readings. However, due to their labor requirements or high costs these methods can hardly be applied to the huge wheat growing areas of the Northern China Plain. This study therefore examined an alternative method to measure the N status of wheat by using a digital camera to record the visible green light reflected from the plant canopy. The experiment was conducted near Beijing in a multi-factorial field trial with three levels of N. The intensity of green light reflected from the wheat canopy was compared to the total N concentration, to the nitrate concentration of the basal stem, and to the SPAD readings of leaves. The results show significant inverse relationships between greenness intensity, canopy total N, and SPAD readings at booting and flowering. At booting, sap nitrate <2000mgL^-1 was inversely related to greenness intensity and to sap nitrate concentration in the basal stem. At sap nitrate ~2000mgL^-1, the greenness intensity reached a plateau. At booting and flowering, significant inverse relationships between greenness intensity and shoot biomass were found. The results show the potential of the new method to assess the N status of winter wheat.

Settlement history of a mountain oasis in Northern Oman

To unravel the settlement history of oases in northern Oman, data on topography, the agricultural setting, water and soil parameters and archaeological findings were collected in the Wadi Bani Awf with its head oasis Balad Seet. Data collection lasted from April 2000 to April 2003 and was based on the establishment of a 3D-georeferenced map of the oasis comprising all its major infrastructural and agronomic features. At today's Balad Seet, a total of 8.8 ha are planted to 2,800 date palms and 4.6 ha are divided into 385 small fields dedicated to wheat, barley, sorghum, oats, alfalfa, garlic, onion, lime and banana. Radiocarbon dating of charcoal in the lower part of the main terrace system determined its age to 911 ± 43 years. Monthly flow measurements of four major aflaj systems showed a total maximum flow of 32 m^3 h^-1 with the largest falaj contributing 78% of the total flow. During drought periods, average water flow decreased by 3% per month, however, with significant differences between the spring systems. The analysis of the tritium/^3helium ratio in the water led to an estimated water age of up to 10 years. In combination with the flow data, this provided insights into the elasticity of the spring flow over time. The use of the natural resources of the Wadi Bani Awf by a pastoral population started probably in the early 3rd millennium BC. The first permanent settlement might have been established at Balad Seet during the first part of the 1st millennium BC. Presumably it was initiated by settlers from al-Hamra, a village at the southern foot of the Hajar mountains. Given an abundant und stable flow of springs, even in periods of drought, the construction of Balad Seet's first irrigation systems may have occurred at this early time. The combination of topographic, agricultural, hydro-pedological and archaeological data allowed assessment of the carrying capacity of this oasis over the three millennia of its likely existence. The changing scarcity of land and water and the eventual optimisation of their use by different aflaj constructions have been major driving forces for the development and apparent relativeley stable existence of this oasis.

Agricultural, architectural and archaeological evidence for the role and ecological adaptation of a scattered mountain oasis in Oman

The recent discovery of the monumental 5000 years old tower tombs on top of the up to 1850 m high Shir plateau has raised numerous questions about the economic and infrastructural basis of the agro-pastoral-piscicultural society which likely has constructed them. The scattered oasis settlement of Maqta, situated just below the towers in a rugged desert environment has therefore been studied from 2001 to 2003 to understand its prehistoric and present role along the ancient trade route which connected the inner-Omani Sharqiya across the southern Hajar mountains with the ocean port of Tiwi. Maqta consists of a central area with 59 buildings and 12 scattered temporary settlements comprising a total of about 200 semi-nomadic inhabitants and next to 900 sheep and goats. The 22 small springs with a flow rate between 5 and 1212-l h^-1 are watering 16 terrace systems totaling 4.5 ha of which 2.9 ha are planted to date palms (Phoenix dactylifera L.), 0.4 ha to wheat landraces (Triticum durum and Triticum aestivum) during the cooler winter months, 0.4 are left fallow and 0.8 h are abandoned. During a pronounced drought period from 2001 to 2003, the springs’ flow rate declined between 38% and 72%. Most of the recent buildings of the central housing area were found empty or used as temporary stores by the agro-pastoral population watching their flocks on the surrounding dry mountains. There is no indication that there ever was a settlement older than the present one. A number of Hafit (3100–2700 BC) and Umm an-Nar (2700–2000 BC) tombs just above the central housing area and further along one of the trade routes to the coast are the only indication of an old pastoral landuse in Maqta territory where oasis agriculture may have entered only well after 1000 AD. With this little evidence of existence during the 3rd millennium BC, Maqta is unlikely to have played any major role favouring the construction of the nearby monumental Shir tower tombs other than providing water for herders and their flocks, early migrant traders or tower tomb constructors.

A survey of wheat landraces in Oman

Little is known about the diversity of wheat (Triticum spp.) in Oman. Therefore, a survey was conducted in northern Oman to collect landraces of Triticum durum, T. aestivum and T. dicoccon for subsequent morphological characterization and investigations on stress adaptation. The results show that the cultivation of these landraces (the genetic composition of which remains to be studied in more detail) is done primarily by traditional farmers who preserve the inherited germplasm on often tiny plots in remote mountain oases. This type of traditional cultivation is under heavy economic pressure. An appendix of landraces of other crops collected in the Batinah region and in the mountain oases can be found online.

Discrimination between organically and conventionally grown winter wheat by means of holistic and selected analytical methods

Die Verordnung des Europäischen Rates (EC) 834/2007 erkennt das Recht des Konsumenten auf eine Entscheidung basierend auf vollständiger Information bezüglich der enthaltenen Zutaten im Produkt und deren Herkunft (Qualität der Verarbeitung). Die primäre Kennzeichnungsverordnung betont „organische“ Produktionsstandards ebenso wie die Notwendigkeit zur Kontrolle und Aufsicht. Jedoch ist zurzeit keine validierte Methode zur analytischen Diskriminierung zwischen „organischer“ und „konventioneller“ Herkunft von angebotenen Lebensmitteln verfügbar. Das Ziel der Dissertationsarbeit war die Überprüfung der Möglichkeit mit ausgewählten analytischen und holistischen Methoden zwischen organisch und konventionell angebautem Weizen objektiv zu unterscheiden. Dies beinhaltete die Bestimmung des Gesamtstickstoff (Protein) nach Dumas, zweidimensionale Fluoreszenzdifferenz Gelelektrophorese (2D DIGE) und die Kupferchloridkristallisation. Zusätzlich wurde die Anzahl der Körner pro Ähre (Kornzahl) bestimmt. Alle Bestimmungen wurden an rückverfolgbaren in den Jahren 2005 – 2007 in Belgien gesammelten Proben des Winterweizen (Triticum aestivum L. cv. Cubus) durchgeführt. Statistisch signifikante (p < 0.05) Unterschiede wurden innerhalb der untersuchten Probengruppen sowohl in der Kornzahl, dem Gesamtsticksoff (Eiweißgehalt), als auch in der Gesamtausbeute gefunden, wobei in den meisten Fällen die konventionellen Proben höhere Kornzahlen und Gesamtsticksoff (Eiweißgehalte) aufwiesen. Eine mit der 2D DIGE kompatible Probenvorbereitungsmethode für Winterweizen wurde entwickelt und auf einen internen Winterweizenstandard sowie die entsprechenden Proben angewendet. Die organischen Proben waren im Vergleich mit den konventionellen Gegenstücken in allen Fällen durch eine kleinere Anzahl von signifikant (p < 0.05) stärker exprimierten Proteinspots gekennzeichnet. Gewisse Tendenzen in Richtung der Bevorzugung bestimmter Regionen von stärker ausgeprägten Proteinspots auf aufeinanderfolgenden 2D Abbildungen in Abhängigkeit von der landwirtschaftlichen Methode konnten zwar beobachtet werden, jedoch konnte kein universelles Markerprotein zur Unterscheidung von konventionell und biologisch angebautem Winterweizen identifiziert werden. Die rechnergestützte Verarbeitung der digitalisierten Kristallisierungsbilder mittels multivariater statistischer Analyse und der Regression partieller kleinster Quadrate ermöglichte eine 100%ig korrekte Vorhersage der landwirtschaftlichen Methode unbekannter Proben sowie der Beschreibung der Kristallisierungsbilder. Diese Vorhersage bezieht sich nur auf den hier verwendeten Datensatz (Proben einer Sorte von drei Standorten über zwei Jahre) und kann nicht ohne weiteres übertragen (generalisiert) werden. Die Ergebnisse deuten an, dass die Quantifizierung der beschriebenen Parameter ein hohes Potential zur Lösung der gestellten Aufgabe besitzt.