Géodiversité sous-marine de Nouvelle-Calédonie. 1ère partie

The object of this article is to offer a synthesis of the knowledge clarifying the originality and the diversity of the submarine geological formations of the New Caledonian EEZ. A reminder is given onto the geologic history of the region, based upon the dislocation of the Gondwana Continent, the opening of the Tasman Sea, the presence of submarine volcanism, the setting up of heavy peridotitic rocks, the building up of the Fairway and Lord Howe Ridges and of sedimentary basins, the formation of volcanic domes and sea-mounts or guyots, the subduction along the Vanuatu Trench, the uplift of the Loyalty Islands, the development of carbonated ptatforms around the islands etc.... Of this complex history ensues an exceptional submarine geo-diversity. After this presentation the article clarifies the methods and the tools used in marine geosciences to map, explore, observe, analyze, sample, that they are embarked or are autonomous, teleoperated or inhabited systems. A chapter describes the programs which were set up since about forty years and the results obtained as well as the scientific teams concerned with. In conclusion, based on the unpublished character of this geo-diversity, the article introduces the second text to come in a next issue of theTai Kona magazine, text which will focus on the scientific, economic (mineral resources), environmental (deep biodiversity) and risks (seismicity) challenges that are worn by one of the most original submarine geologic context in the world.

Geologie und Hydrogeologie im Raum Bad Pyrmont unter besonderer Berücksichtigung des Quellensystems

The hydrodynamics and hydrochemistry of salt and fresh water from solid rock aquifer systems in the Pyrmont area are described and interpreted on the basis of recent investigations including geoelectrics, isotope hydrology, soil air analysis. Theories on the source of the springs in this area are developed, which explain the different compositions of the springs and make it possible to protect them. Data from new and re-interpretated drill holes, borehole logs and outcrops suggest a revision of the geological structure of the Pyrmont dome. Bad Pyrmont is situated on a wide dome of Triassic rocks in the southern part of the Lower Saxony uplands. Inversion of the relief has caused the development of an erosional basin surrounded by prominent ridges. Deep faults developed at the crest of the dome as this part of the structure was subjected to the strongest tectonic stress. Subrosion of the Zechstein salts in the western part of the dome has caused the main salt bed to wedge out below the western part of the dome along a N-S striking structure; this structure is refered to as the „Salzhang“ (salt slope). West of the „Salzhang“, where subrosion has removed the salt bed that prevents gas rising from below, carbon dioxide of deep volcanic origin can now rise to the surface. Hydraulic cross sections illustrate the presence of extensive and deep-seated groundwater flow within the entire Pyrmont dome. While groundwater flow is directed vertically downwards in the ridges surrounding the dome, centripetal horizontal flow predominates the intermediate area. In the central part of the dome, groundwater rises to join the River Emmer, which is the main receiving water course in the central part of the eroded basin. The depth of the saltwater/freshwater interface is determinated by the weight of the superimposed freshwater body. Hydrochemical cross sections show the shape and position of the interface and document a certain degree of hydrochemical zonation of the gently mineralized fresh water. Genetic relationships between the two main water types and the hydrochemical zones of the freshwater body are discussed. The knowledge of the hydrogeological relationship in the Bad Pyrmont aquifer systems permits a spatially narrow coexistence of wells withdrawing groundwater for different purposes (medicinal, mineral, drinking and industrial water).

Comparative genomic approaches for investigating evolution in the microbial and viral populations of the rumen

The rumen is home to a diverse population of microorganisms encompassing all three domains of life: Bacteria, Archaea, and Eukarya. Viruses have also been documented to be present in large numbers; however, little is currently known about their role in the dynamics of the rumen ecosystem. This research aimed to use a comparative genomics approach in order to assess the potential evolutionary mechanisms at work in the rumen environment. We proposed to do this by first assessing the diversity and potential for horizontal gene transfer (HGT) of multiple strains of the cellulolytic rumen bacterium, Ruminococcus flavefaciens, and then by conducting a survey of rumen viral metagenome (virome) and subsequent comparison of the virome and microbiome sequences to ascertain if there was genetic information shared between these populations. We hypothesize that the bacteriophages play an integral role in the community dynamics of the rumen, as well as driving the evolution of the rumen microbiome through HGT. In our analysis of the Ruminococcus flavefaciens genomes, there were several mobile elements and clustered regularly interspaced short palindromic repeat (CRISPR) sequences detected, both of which indicate interactions with bacteriophages. The rumen virome sequences revealed a great deal of diversity in the viral populations. Additionally, the microbial and viral populations appeared to be closely associated; the dominant viral types were those that infect the dominant microbial phyla. The correlation between the distribution of taxa in the microbiome and virome sequences as well as the presence of CRISPR loci in the R. flavefaciens genomes, suggested that there is a “kill-the-winner” community dynamic between the viral and microbial populations in the rumen. Additionally, upon comparison of the rumen microbiome and rumen virome sequences, we found that there are many sequence similarities between these populations indicating a potential for phage-mediated HGT. These results suggest that the phages represent a gene pool in the rumen that could potentially contain genes that are important for adaptation and survival in the rumen environment, as well as serving as a molecular ‘fingerprint’ of the rumen ecosystem.

Desenvolvimento e caracterização de micropartículas de amido reticuladas com agente fosfatado e avaliação da adsorção do azul de metileno

Starch has properties that make it one of the most studied biopolymers today. It is biodegradable, biocompatible, stable and non-toxic. This work has synthesis of starch and tapioca microparticles, through chemical modification by crosslinking with sodium tripolyphosphate agent in concentrations 7.5 and 15% (m / m). The amylose content was measured for starch and commercial cassava starch at 21.8% and 28.6%, respectively. According to the solubility index, processing in basic medium does not change the solubility of the material, but the addition of crosslinking agent increases this index, which changed from 12.8% for the control unprocessed, to 22.4% for the A5R15 sample. Soluble starch-based materials had a significant increase in the crosslinking density by increasing the concentration of crosslinker, from 1.4 in A5R7,5 sample, to 1.9 in A5R15. The cassava starch-based materials exhibited an opposite behavior: to increase the concentration of crosslinker crosslinking density decreased significantly in F5R7.5 from 2.9, to 1.9 in F5R15 sample. The point of zero charge (PZC) shows that below pH 4 the surface is positively charged. The surface area data is between 3,04 and 1,15 m2.g-1. The pore volume between 2.94 and 1.33 cm3.g-1 and pore size around 1.5 nm. The SEM indicates uneven distribution of microparticles, which are smooth, with no ridges. The maximum adsorption capacity of the materials were tested at pH 7.7 and for A5R15 and CA sample, at pH 2, 5, 6 and 9. It is noted that the processing in basic medium reduces the adsorption capacity of CA and CF in respect fo A and F. The adsorption in A5R15 sample has great dependency on the pH, reaching a value of 587 μg.g-1 in pH 7.7. The samples A5R15 and F5R7,5 adsorbed similar amounts, according to the statistical analysis, and significantly higher than their respective controls and showed lower desorption, indicating that the modification process was effective to control the release of methylene blue. The infrared spectra not show the characteristic bands of the phosphate bonds to the material formed, however, developments in hydroxyl characteristic band suggest modification in the way this group was linked after the reaction. After adsorption, the infrared spectra show different format in the band of hydroxyl. PCA analysis shows that the greatest changes observed in the IR spectra are observed in the region of 3500 cm-1. Thermal analysis showed three thermal events related to dehydration and material degradation. It is observed that the processing increases the temperature to the first mass loss, fixed at 12%, but not observed increased stability due to the presence of crosslinker or process.

Rapid hydrothermal cooling above the axial melt lens at fast-spreading mid-ocean ridge

Axial melt lenses sandwiched between the lower oceanic crust and the sheeted dike sequences at fast-spreading mid-ocean ridges are assumed to be the major magma source of oceanic crust accretion. According to the widely discussed "gabbro glacier'' model, the formation of the lower oceanic crust requires efficient cooling of the axial melt lens, leading to partial crystallization and crystal-melt mush subsiding down to lower crust. These processes are believed to be controlled by periodical magma replenishment and hydrothermal circulation above the melt lens. Here we quantify the cooling rate above melt lens using chemical zoning of plagioclase from hornfelsic recrystallized sheeted dikes drilled from the East Pacific at the Integrated Ocean Drilling Program Hole 1256D. Weestimate the cooling rate using a forward modelling approach based on CaAl-NaSi interdiffusion in plagioclase. The results show that cooling from the peak thermal overprint at 1000-10506 degrees C to 6006 degrees C are yielded within about 10-30 years as a result of hydrothermal circulation above melt lens during magma starvation. The estimated rapid hydrothermal cooling explains how the effective heat extraction from melt lens is achieved at fast-spreading mid-ocean ridges.

SSR genetic diversity assessment of popular pigeonpea varieties in Malawi reveals unique fingerprints

Background: Pigeonpea ( Cajanus cajan L. Millsp.) is a drought tolerant legume of the Fabaceae family and the only cultivated species in the genus Cajanus. It is mainly cultivated in the semi-arid tropics of Asia and Oceania, Africa and America. In Malawi, it is grown as a source of food and income and for soil improvement in intercropping systems. However, varietal contamination due to natural outcrossing causes significant quality reduction and yield losses. In this study, 48 polymorphic SSR markers were used to assess the diversity among all pigeonpea varieties cultivated in Malawi to determine if a genetic fingerprint could be identified to distinguish the popular varieties. Results: A total of 212 alleles were observed with an average of 5.58 alleles per marker and a maximum of 14 alleles produced by CCttc019 (Marker 40). Polymorphic information content (PIC), ranged from 0.03 to 0.89 with an average of 0.30. A neighbor-joining tree produced 4 clusters. The most commonly cultivated varieties, which include released varieties and cultivated land races, were well-spread across all the clusters observed, indicating that they generally represented the genetic diversity available in Malawi, although substantial variation was evident that can still be exploited through further breeding. Conclusion: Screening of the allelic data associated with the five most popular cultivated varieties, revealed 6 markers – CCB1, CCB7, Ccac035, CCttc003, Ccac026 and CCttc019 – which displayed unique allelic profiles for each of the five varieties. This genetic fingerprint can potentially be applied for seed certification to confirm the genetic purity of seeds that are delivered to Malawi farmers.

The Southeast Indian Ridge between 88°E and 118°E: Gravity anomalies and crustal accretion at intermediate spreading rates

Although slow spreading ridges characterized by a deep axial valley and fast spreading ridges characterized by an axial bathymetric high have been extensively studied, the transition between these two modes of axial morphology is not well understood. We conducted a geophysical-survey of the intermediate spreading rate Southeast Indian Ridge between 88 degrees E and 118 degrees E, a 2300-km-long section of the ridge located between the Amsterdam hot spot and the Australian-Antarctic Discordance where satellite gravity data suggest that the Southeast Indian Ridge (SEIR) undergoes a change from an axial high in the west to an axial valley in the east. A basic change in axial morphology is found near 103 degrees 30'E in the shipboard data; the axis to the west is marked by an axial high, while a valley is found to the east. Although a well-developed axial high, characteristic of the East Pacific Rise (EPR), is occasionally present, the more common observation is a rifted high that is lower and pervasively faulted, sometimes with significant (> 50 m throw) faults within a kilometer of the axis. A shallow axial valley (< 700 m deep) is observed from 104 degrees E to 114 degrees E with a sudden change to a deep (>1200 m deep) valley across a transform at 114 degrees E. The changes in axial morphology along the SEIR are accompanied by a 500 m increase in near-axis ridge flank depth from 2800 m near 88 degrees E to 3300 m near 114 degrees E and by a 50 mGal increase in the regional level of mantle Bouguer gravity anomalies over the same distance, The regional changes in depth and mantle Bouguer anomaly (MBA) gravity can be both explained by a 1.7-2.4 km change in crustal thickness or by a mantle temperature change of 50 degrees C-90 degrees C. In reality, melt supply (crustal thickness) and mantle temperature are linked, so that changes in both may occur simultaneously and these estimates serve as upper bounds. The along-axis MBA gradient is not uniform. Pronounced steps in the regional level of the MBA gravity occur at 103 degrees 30'E-104 degrees E and at 114 degrees E-116 degrees E and correspond to the changes in the nature of the axial morphology and in the amplitude of abyssal hill morphology suggesting that the different forms of morphology do not grade into each other but rather represent distinctly different forms of axial (s)tructure and tectonics with a sharp transition between them. The change from an axial high to an axial valley requires a threshold effect in which the strength of the lithosphere changes quickly. The presence or absence of a quasi-steady state magma chamber may provide such a mechanism. The different forms of axial morphology are also associated with different intrasegment MBA gravity patterns. Segments with an axial high have an MBA low located at a depth minimum near the center of the segment, At EPR-like segments, the MBA low is about 10 mGal with along-axis gradients of 0.15-0.25 mGal/km, similar to those observed at the EPR, Rifted highs have a shallower low and lower gradients suggesting an attenuated composite magma chamber and a reduced and perhaps episodic melt supply. Segments with a shallow axial valley have very flat along-axis MBA profiles with little correspondence between axial depth and axial MBA gravity.

The Southeast Indian Ridge between 88°E and 118°E: Variations in crustal accretion at constant spreading rate

The temperature of the mantle and the rate of melt production are parameters which play important roles in controlling the style of crustal accretion along mid-ocean ridges. To investigate the variability in crustal accretion that develops in response to variations in mantle temperature, we have conducted a geophysical investigation of the Southeast Indian Ridge (SEIR) between the Amsterdam hotspot and the Australian-Antarctic Discordance (88 degrees E-118 degrees E). The spreading center deepens by 2100 m from west to east within the study area. Despite a uniform, intermediate spreading rate (69-75 mm yr-l), the SEIR exhibits the range in axial morphology displayed by the East Pacific Rise and the Mid-Atlantic Ridge (MAR) and usually associated with variations in spreading rate. The spreading center is characterized by an axial high west of 102 degrees 45'E, whereas an axial valley is prevalent east of this longitude. Both the deepening of the ridge axis and the general evolution of axial morphology from an axial high to a rift valley are not uniform. A region of intermediate morphology separates axial highs and MAR-like rift valleys. Local transitions in axial morphology occur in three areas along the ridge axis. The increase in axial depth toward the Australian-Antarctic Discordance may be explained by the thinning of the oceanic crust by similar to 4 km and the change in axial topography. The long-wavelength changes observed along the SEIR can be attributed to a gradient in mantle temperature between regions influenced by the Amsterdam and Kerguelen hot spots and the Australian-Antarctic Discordance. However, local processes, perhaps associated with an heterogeneous mantle or along-axis asthenospheric flow, may give rise to local transitions in axial topography and depth anomalies.

Intraplate versus ridge volcanism on the Pacific-Antarctic Ridge near 37°S -111°W

Exploration of the Foundation Volcanic Chain (33 degrees S-131 degrees W; 37 degrees S-111 degrees W) revealed the existence of different magmatic provinces with relation to their geological settings. (1) The Pacific-Antarctic Ridge (PAR) is made up of several en echelon segments where both glassy midocean ridge basalts (MORBs) with low incompatible elements (K2O<200 ppm, Zr<120 ppm and Ce <20 ppm) as well as andesites and dacites have erupted, (2) Oblique Ridges located up to 300 lan from the PAR axis are topped with seamounts made up essentially of transitional (T) and enriched (E) MORBs with intermediate incompatible elements (K2O=0.11-0.40 %, Zr=70-140 ppm and Ce=15-30 ppm), (3) the Foundation Seamounts (FS) consisting essentially of isolated volcanoes which have erupted alkalic lavas (alkali basalt, trachybasalt and trachyandesite) with high incompatible elements (K2O (0.50-1.1 %, Zr (>150 ppm) and Ce (>48 ppm)) at about 306-1300 km from the PAR axis, (4) The Old Pacific Seamounts built on a crust older than 23 m. y. located west of longitude 124 degrees W (> 1300 km from the PAR axis) consist of T and EMORB. On the PAR axis, extensive crystal fractionation (>65%) produced the silicic lavas. On the basis of Pacific plate reconstruction using a half spreading rate of about 50 mm/yr and integrating the observed compositional changes with respect to the structural settings, it is inferred that the last volcanic events giving rise to the FS took place at about 110 km from the PAR axis about 5 m. y. ago. The Oblique Ridges built between 5 m. y. and <1 m. y. are believed to represent ancient leaky transforms and/or large discontinuities between accreting ridge segments filled by volcanic cones during the interaction (mixing) of the enriched plume components of the FS with PAR depleted (MORB type) magmatism. The Old Pacific Seamounts built on ancient crust (>23 m. y.) with MORB volcanics comparable to those of the the Oblique Ridge-PAR provinces, could also have been formed by an interaction between the Foundation Seamount (dredge site 28) hotspot magmatism and that of an ancient accreting ridge magmatism precursor of the PAR.

VESPA cruise report. Volcanic Evolution of South Pacific Arcs. n/o L’Atalante, Nouméa – Nouméa, 22 May - 17 June 2015

VESPA was a successful 25 day research cruise on R/V l'Atalante that took place in May and June 2015. The main aim was to acquire new rock samples from extinct volcanoes on the Norfolk, Loyalty and Three Kings ridges, which connect New Caledonia and New Zealand. This was in order to test various hypotheses of Late Cretaceous-Miocene SW Pacific tectonic development relating to (i) nature and duration of magmatism on the ridges; (ii) timing of subduction initiation east of northern Zealandia; (iii) postulated subduction polarity changes. A total of 3400 km of 'sismique rapide' shallow reflection seismic data were acquired and processed onboard. The seismic lines provided a very useful structural-stratigraphic framework for the rock dredging. Combined with multibeam bathymetry data they allowed intelligent targeting of acoustic basement (lavas) and specific seismic reflectors (sedimentary strata) on rocky slopes and fault scarps. Different stratigraphic levels of the Loyalty and Three Kings Ridge volcanic piles were sampled by dredging at different water depths on the Cook Fracture Zone and Cagou Trough fault scarps. By the end of the cruise, 43 dredges had been attempted and 36 of them yielded igneous or sedimentary rocks potentially useful to the VESPA project. Onboard use of a portable X-ray fluorescence unit confirmed the presence of intraplate (but no arc) volcanoes on the Norfolk Ridge and presence of arc, intraplate and shoshonitic volcanoes on the Loyalty and Three Kings Ridges. A total of 770 kg of rock was retained for post-cruise analysis in New Caledonia, France and New Zealand. Future work will include micropaleontological dating of sedimentary rocks, U-Pb and Ar-Ar isotopic dating of igneous rocks, and whole rock geochemical and tracer isotope analyses. We are optimistic that many of the initial research hypotheses will be able to be tested.

Pleistocene Mass Transport Deposits Off Barbados Accretionary Prism (Lesser Antilles)

Two Pleistocene mass transport deposits (MTDs), with volumes of thousands of km(3), have been identified from multi-channel seismic data in the abyssal plain at the front of the Barbados accretionary prism. Estimated sediment volumes for these MTDs are likely underestimated due to limited seismic coverage. In this work, we suggest that these MTDs are comparable in size to large submarine landslides as reported in the literature. These MTDs lie on the vicinity of two major oceanic ridges, the Barracuda Ridge and the Tiburon Rise. It is also suggested in this work that the MTDs come from seismicity associated with the formation of the Barracuda Ridge or the Barbados accretionary prism; however, triggering mechanisms involved in their formation remain uncertain. The present study discusses the potential causal factors accounting for the formation of these MTDs.

Identificación del agente etiológico y sensibilidad a antimicrobianos en muestras de orina de los habitantes con infección urinaria de la comunidad de Chuichún-Tambo -Cañar agosto - enero 2015-2016.

ANTECEDENTES: Las infecciones urinarias (ITU) son una de las principales causas de morbimortalidad en el país. Las enterobacterias son los principales uropatógenos que por vía ascendente colonizan el tracto urinario. (1) OBJETIVO: Fue identificar el agente etiológico y sensibilidad a antimicrobianos en muestras de orina de los habitantes con infección urinaria de la comunidad de Chuichún-Tambo-Cañar. Agosto-Enero 2015-2016. METODOLOGÍA: Se realizó un estudio descriptivo de corte transversal compuesto por 1037 habitantes, cuya muestra representativa fue de 281 personas. Se realizó urocultivo y antibiograma previa detección de ITU mediante el Examen Elemental y Microscópico de Orina (EMO). Los participantes con su firma/huella en el consentimiento informado aceptaron colaborar en el proyecto, llenaron una encuesta con datos de filiación y variables de estudio, luego entregaron la muestra de orina para su respectivo análisis. Para procesar y tabular la información obtenida, se utilizaron los programas SPSS v22 y Microsoft Excel 2010 para la estadística descriptiva y gráfica. RESULTADOS: De 281 habitantes el 16,0% presentó infección urinaria según el EMO, de los cuales el 66,7% resultó urocultivo positivo. De los pacientes con ITU el 64,4% son mujeres entre 15–64 años. Escherichia coli resultó ser el microorganismo más frecuente (63,3%), seguido de Proteus spp, (16,7%), Enterococo (10,0%), Klebsiella spp (6,7%) y Estafilococo aureus (3,3%). CONCLUSIÓN: Las ITU afectan principalmente a mujeres, relacionándose con infecciones recurrentes, actividad sexual y mala práctica de hábitos de higiene.

Identificación de infección de vías urinarias según el examen elemental y microscópico de orina de los habitantes de la Comunidad de Sarapamba Yutuloma Tambo-Cañar 2015

ANTECEDENTES.- Las infecciones de vías urinarias son causadas por bacterias, hongos y parásitos a nivel mundial.1Esta investigación se realizó en los habitantes de la comunidad de Sarapamba Yutuloma. OBJETIVO.- Determinar la prevalencia de infección de vías urinarias y sus factores asociados en los habitantes de la comunidad de Sarapamba Yutuloma Tambo. METODOLOGÍA.- La investigación fue de tipo descriptivo transversal, se trabajó con un universo de 280 habitantes de la comunidad. El tamaño de la muestra fue calculada con la fórmula finita con un nivel de confiabilidad del 95%.el resultado de la población a estudiar fue de 180 habitantes. Los participantes de esta investigación firmaron o colocaron su huella digital en el consentimiento informado en mayores o asentimiento para menores de edad, personas analfabetas o discapacitadas, llenaron una encuesta que han sido elaborados en base al modelo de Vigilancia STEPS de los factores de riesgo de enfermedades crónicas no transmisibles de la OMS 2010 aplicado en Suiza. Las muestras fueron recolectadas bajo normas de Bioseguridad, estas fueron procesadas en el Laboratorio del Centro de Diagnóstico de la Facultad de Ciencias Médicas de la Universidad de Cuenca. La información obtenida se registró en los programas, SPSS V 22 y Excel para hacer el análisis y las estadísticas. RESULTADOS.- El 16,1% de los habitantes de Sarapamba Yutuloma tiene infección del tracto urinario, el 86,2% son mujeres, el 13,8 son varones, 72,4% en edades comprendidas entre 22 y 53 años y el 89,9% al mantener actividad sexual.

In vivo antileishmanial activity and chemical profile of polar extract from Selaginella sellowii

The polar hydroethanolic extract from Selaginella sellowii (SSPHE) has been previously proven active on intracellular amastigotes (in vitro test) and now was tested on hamsters infected with Leishmania (Leishmania) amazonensis (in vivo test). SSPHE suppressed a 100% of the parasite load in the infection site and draining lymph nodes at an intralesional dose of 50 mg/kg/day × 5, which was similar to the results observed in hamsters treated with N-methylglucamine antimonate (Sb) (28 mg/Kg/day × 5). When orally administered, SSPHE (50 mg/kg/day × 20) suppressed 99.2% of the parasite load in infected footpads, while Sb suppressed 98.5%. SSPHE also enhanced the release of nitric oxide through the intralesional route in comparison to Sb. The chemical fingerprint of SSPHE by high-performance liquid chromatography with diode-array detection and tandem mass spectrometry showed the presence of biflavonoids and high molecular weight phenylpropanoid glycosides. These compounds may have a synergistic action in vivo. Histopathological study revealed that the intralesional treatment with SSPHE induced an intense inflammatory infiltrate, composed mainly of mononuclear cells. The present findings reinforce the potential of this natural product as a source of future drug candidates for American cutaneous leishmaniasis.