874 resultados para EDI exchange
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Thyroid hormone receptors (TRs) are ligand-gated transcription factors with critical roles in development and metabolism. Although x-ray structures of TR ligand-binding domains (LBDs) with agonists are available, comparable structures without ligand (apo-TR) or with antagonists are not. It remains important to understand apo-LBD conformation and the way that it rearranges with ligands to develop better TR pharmaceuticals. In this study, we conducted hydrogen/deuterium exchange on TR LBDs with or without agonist (T 3) or antagonist (NH3). Both ligands reduce deuterium incorporation into LBD amide hydrogens, implying tighter overall folding of the domain. As predicted, mass spectroscopic analysis of individual proteolytic peptides after hydrogen/ deuterium exchange reveals that ligand increases the degree of solvent protection of regions close to the buried ligand-binding pocket. However, there is also extensive ligand protection of other regions, including the dimer surface at H10-H11, providing evidence for allosteric communication between the ligand-binding pocket and distant interaction surfaces. Surprisingly, Cterminal activation helix H12, which is known to alter position with ligand, remains relatively protected from solvent in all conditions suggesting that it is packed against the LBD irrespective of the presence or type of ligand. T 3, but not NH3, increases accessibility of the upper part of H3-H5 to solvent, and we propose that TR H12 interacts with this region in apo-TR and that this interaction is blocked by T 3 but not NH3.Wepresent data from site-directed mutagenesis experiments and molecular dynamics simulations that lend support to this structural model of apo-TR and its ligand-dependent conformational changes. (Molecular Endocrinology 25: 15-31, 2011). Copyright © 2011 by The Endocrine Society.
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A model of the DN interaction is presented which is developed in close analogy to the meson-exchange KN potential of the Jülich group utilizing SU(4) symmetry constraints. The main ingredients of the interaction are provided by vector meson (ρ, ω) exchange and higher-order box diagrams involving D *N, DΔ, and D *Δ intermediate states. The coupling of DN to the π Λ c and π Σ c channels is taken into account. The interaction model generates the Λ c(2595)-resonance dynamically as a DN quasi-bound state. Results for DN total and differential cross sections are presented and compared with predictions of two interaction models that are based on the leading-order Weinberg-Tomozawa term. Some features of the Λ c(2595)-resonance are discussed and the role of the near-by π Σ c threshold is emphasized. Selected predictions of the orginal KN model are reported too. Specifically, it is pointed out that the model generates two poles in the partial wave corresponding to the Λ(1405)-resonance. © 2011 SIF, Springer-Verlag Berlin Heidelberg.
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The metabolic effects caused by hydric deficiency (HD) on Eucalyptus grandis clones were assessed by an experiment where plants were cultivated in four blocks. The first was the control block, normally irrigated, whereas the other three blocks were submitted to cycles of hydric deficiency. Analysis of photosynthetic efficiency, enzymatic activity of antioxidant response system, level of pigments and L-proline concentration were performed to evaluate the HD effects. Results showed that HD altered some parameters related to photosynthetic activity, pigments accumulation, proline and enzymatic activity. Clone 433 of E. grandis presented higher response ability to HD.
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The DN interaction is studied in close analogy to the meson-exchange K̄N potential of the Jülich group using SU(4) symmetry constraints. The model generates the Λ c(2595) resonance dynamically as a DN quasi-bound state. Results for DN scattering lengths and cross sections are presented and compared with predictions based on the Weinberg-Tomozawa term. Some features of the Λ c(2595) resonance are also discussed emphasizing the role of the near-by πΣ c threshold. © 2012 American Institute of Physics.
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