YKL -40, a vascular -associated serum marker for glioblastoma, correlates with chronic activation of AKT

YKL-40 is a secreted glycoprotein that has been reported to be expressed in pathologic conditions of extracellular matrix degradation and angiogenesis, such as rheumatoid arthritis, severe osteoarthritis, primary colorectal cancer, metastatic breast cancer, and recurrent ovarian cancer (Dehn, Hogdall et al. 2003). ^ We have identified YKL-40 as a serum marker for glioblastoma multiforme (GBM) using microarray analysis from samples of GBM. We compared the gene expression profile of 19 gliomas to pooled normal brain tissue using the Incyte 10,000 gene expression array. The most differentially expressed gene in this analysis was YKL-40; it was detected in GBM samples with a range of 3 to 62-fold elevation over normal brain. Western blot analysis of glioma samples for YKL-40 protein levels revealed substantial elevation in approximately 65% of GBMs, and undetectable levels in lower-grade gliomas and normal brain tissue. ELISA analysis on serum samples of glioma patients showed that YKL-40 levels were substantially elevated in many of the GBM patients. Statistical analysis indicated that in patients with glioma, serum YKL-40 levels correlate with tumor grade and potentially tumor burden in GBM. ^ Furthermore, we found that YKL-40 expression by in-situ hybridization on a brain tumor tissue array was limited to GBM's and gliosarcomas (GSA), and that YKL-40 expression was specific to the GBM component of GSA. Additional in-situ hybridization analysis, found it to be regionally associated with tumor vasculature as well as activated AKT expression in both human and mouse GBM's. Correlation of elevated YKL-40 with phospho-AKT was confirmed by Western blot analysis on a series of glioblastoma tumors, and inhibition of PI3 Kinase signaling by addition of LY294002 also decreased secretion of YKL-40 over a 7-day period in U87 glioblastoma cell tine. Lastly, YKL-40 expression was induced in response to serum starvation and altered by interaction with specific extracellular matrix (ECM) modules. In summary, we have identified the first accurate serum marker for high-grade gliomas. Furthermore, our findings indicate that YKL-40 is a highly expressed vascular-related glycoprotein in human GBM tissue and that it is affected by the AKT signaling pathway and interaction with components of brain ECM proteins. ^

Dinoflagellate cyst assemblages, oxygen isotope records of foraminifera, and alkenone and Mg/Ca-based SST estimates for the time interval 3.40-3.18 Ma (Late Pliocene) from five North Atlantic and Caribbean sediment cores

The early Late Pliocene (3.6 to ~3.0 million years ago) is the last extended interval in Earth's history when atmospheric CO2 concentrations were comparable to today's and global climate was warmer. Yet a severe global glaciation during marine isotope stage (MIS) M2 interrupted this phase of global warmth ~3.30 million years ago, and is seen as a premature attempt of the climate system to establish an ice-age world. Our geochemical and palynological records from five marine sediment cores along a Caribbean to eastern North Atlantic transect show that increased Pacific-to-Atlantic flow via the Central American Seaway weakened the North Atlantic Current (NAC) and attendant northward heat transport prior to MIS M2. The consequent cooling of the northern high latitude oceans permitted expansion of the Greenland ice sheet during MIS M2, despite near-modern atmospheric CO2 concentrations. Before and after MIS M2, heat transport via the NAC was crucial in maintaining warm climates comparable to those predicted for the end of this century.

(Table 1) Potassium, radiogenic Argon 40 and dated age for DSDP Hole 94-608 sediments

K-Ar dates were obtained for three pillow basalt samples recovered from Site 608 (Samples 608-58-1, 103-109 cm; 608-59-1, 3-7 cm; 608-59-1, 48-53 cm). Reliable K-Ar dates cannot be routinely obtained for deep-sea igneous rocks, because they may be subject to inaccuracies related to seawater alteration (Seidemann, 1977, doi:10.1130/0016-7606(1977)88<1660:EOSAOK>2.0.CO;2) and/or the presence of excess radiogenic 40Ar (Dalrymple and Moore, 1968, doi:10.1126/science.161.3846.1132; Dymond, 1970, doi:10.1130/0016-7606(1970)81[1229:EAISBP]2.0.CO;2). Thus, the possibility that the samples dated in this study were subject to these sources of inaccuracy must be evaluated.

Global distributions of pteropods (Gymnosomata, Thecosomata, Pseudothecosomata) abundance and biomass - Gridded data product (NetCDF) - Contribution to the MAREDAT World Ocean Atlas of Plankton Functional Types

Pteropods are a group of holoplanktonic gastropods for which global biomass distribution patterns remain poorly resolved. The aim of this study was to collect and synthesize existing pteropod (Gymnosomata, Thecosomata and Pseudothecosomata) abundance and biomass data, in order to evaluate the global distribution of pteropod carbon biomass, with a particular emphasis on its seasonal, temporal and vertical patterns. We collected 25 902 data points from several online databases and a number of scientific articles. The biomass data has been gridded onto a 360 x 180° grid, with a vertical resolution of 33 WOA depth levels. Data has been converted to NetCDF format. Data were collected between 1951-2010, with sampling depths ranging from 0-1000 m. Pteropod biomass data was either extracted directly or derived through converting abundance to biomass with pteropod specific length to weight conversions. In the Northern Hemisphere (NH) the data were distributed evenly throughout the year, whereas sampling in the Southern Hemisphere was biased towards the austral summer months. 86% of all biomass values were located in the NH, most (42%) within the latitudinal band of 30-50° N. The range of global biomass values spanned over three orders of magnitude, with a mean and median biomass concentration of 8.2 mg C l-1 (SD = 61.4) and 0.25 mg C l-1, respectively for all data points, and with a mean of 9.1 mg C l-1 (SD = 64.8) and a median of 0.25 mg C l-1 for non-zero biomass values. The highest mean and median biomass concentrations were located in the NH between 40-50° S (mean biomass: 68.8 mg C l-1 (SD = 213.4) median biomass: 2.5 mg C l-1) while, in the SH, they were within the 70-80° S latitudinal band (mean: 10.5 mg C l-1 (SD = 38.8) and median: 0.2 mg C l-1). Biomass values were lowest in the equatorial regions. A broad range of biomass concentrations was observed at all depths, with the biomass peak located in the surface layer (0-25 m) and values generally decreasing with depth. However, biomass peaks were located at different depths in different ocean basins: 0-25 m depth in the N Atlantic, 50-100 m in the Pacific, 100-200 m in the Arctic, 200-500 m in the Brazilian region and >500 m in the Indo-Pacific region. Biomass in the NH was relatively invariant over the seasonal cycle, but more seasonally variable in the SH. The collected database provides a valuable tool for modellers for the study of ecosystem processes and global biogeochemical cycles.

Los repositorios institucionales de las universidades como escenarios de la producción intelectual. En: Jornadas Científicotecnológicas 40 aniversario UNaM

Los repositorios institucionales se han transformado en la opción para sacar a la luz la producción intelectual, habida cuenta de que en ellos es posible reunir, publicar, diseminar y preservar la misma. La idea de dar visibilidad a dicha producción genera un sinnúmero de desafíos, tanto para las universidades como para los investigadores; problemas que se pueden resumir en la pérdida del anonimato de los autores; la visibilidad de proyectos similares; la posibilidad de compartir recursos humanos y económicos, entre otros. Esta problemática también está presente en las universidades del NEA1, dado que no cuentan con Repositorios Institucionales que alberguen la producción generada en ellas. El presente proyecto planea reunir los elementos necesarios para presentar un acabado diagnóstico de situación que permita impulsar su concreción para beneficio de la comunidad académica de la región.

Las buenas prácticas docentes en los profesorados universitarios desde la perspectiva del alumnado FHyCS - UNaM. En: Jornadas Científico Tecnológicas 40 aniversario UNaM

La investigación: “Las buenas prácticas de enseñanza que apoyan el ingreso y la permanencia de los estudiantes en los profesorados de la FHyCS-UNaM - Código 16H 330”, atiende dificultades del ingreso y permanencia de los estudiantes universitarios. Hay tres maneras en que las distintas universidades adoptan el problema: despreocuparse, preocuparse u ocuparse. El tema no es nuevo, innovamos el enfoque, al identificar en primer año de cinco profesorados de la FHyCS - UNaM, las “buenas prácticas”, ideadas y aplicadas, por los formadores. Recogimos información utilizando: cuestionarios auto - administrados, observaciones, entrevistas y análisis de dispositivos pedagógicos durante 2011/12, en el presente año procesaremos datos, documentos, opiniones diversas. En esta ponencia caracterizamos las buenas prácticas docentes desde la perspectiva y voz del alumnado de primer año. Al finalizar: a) identificaremos estrategias que favorecen el ingreso; b) aportaremos conocimientos al campo profesional, didáctico y curricular; c) socializaremos hallazgos entre pares; y d) promoveremos las buenas prácticas docentes.