Evaluation and application of microsatellites for population identification of Fraser River chinook salmon (Oncorhynchus tshawytscha)

Variation at 13 microsatellite loci was previously surveyed in approximately 7400 chinook salmon (Oncorhynchus tshawytscha) sampled from 50 localities in the Fraser River drainage in southern British Columbia. Evaluation of the utility of the microsatellite variation for population-specific stock identification applications indicated that the accuracy of the stock composition estimates generally improved with an increasing number of loci used in the estimation procedure, but an increase in accuracy was generally marginal after eight loci were used. With 10–14 populations in a simulated fishery sample, the mean error in population-specific estimated stock composition with a 50-popula-tion baseline was <1.4%. Identification of individuals to specific populations was highest for lower Fraser River and lower and North Thompson River populations; an average of 70% of the individual fish were correctly assigned to specific populations. The average error of the estimated percentage for the seven populations present in a coded-wire tag sample was 2% per population. Estimation of stock composition in the lower river commercial net fishery prior to June is of key local fishery management interest. Chinook salmon from the Chilcotin River and Nicola River drainages were important contributors to the early commercial fishery in the lower river because they comprised approximately 50% of the samples from the net fishery prior to mid April.

Marine fish assemblages associated with fish aggregating devices (FADs): effects of fish removal, FAD size, fouling communities, and prior recruits

Fishes are widely known to aggregate around floating objects, including flotsam and fish aggregating devices (FADs).The numbers and diversity of juvenile fishes that associated with floating objects in the nearshore waters of the eastern tropical Pacific were recording by using FADs as an experimental tool. The effects of fish removal, FAD size, and the presence or absence of a fouling community at the FAD over a period of days, and the presence of prior recruits over a period of hours were evaluated by using a series of experiments. The removal of FAD-associated fish assemblages had a significant effect on the number of the dominant species (Abudefduf troschelii) in the following day’s assemblage compared to FADs where the previous day’s assemblage was undisturbed; there was no experimental effect on combined species totals. Fishes do, however, discriminate among floating objects, forming larger, more species-rich assemblages around large FADs compared to small ones. Fishes also formed larger assemblages around FADs possessing a fouling biota versus FADs without a fouling biota, although this effect was also closely tied to temporal factors. FADs enriched with fish accumulated additional recruits more quickly than FADs that were not enriched with fish and therefore the presence of prior recruits had a strong, positive effect on subsequent recruitment. These results suggest that fish recruitment to floating objects is deliberate rather than haphazard or accidental and they sup-port the hypothesis that flotsam plays a role in the interrelationship between environment and some juvenile fishes. These results are relevant to the use of FADs for fisheries, but emphasize that further research is necessary for applied interests.

Age, growth, mortality, and distribution of pinfish (Lagodon rhomboides) in Tampa Bay and adjacent Gulf of Mexico waters

Life-history dynamics of pinfish (Lagodon rhomboides) were examined from data derived from random station surveys conducted in Tampa Bay and adjacent Gulf of Mexico waters during 1993–97. In addition, patterns in spatial distribution and abundance in Gulf of Mexico waters were investigated. Ages determined from whole otoliths ranged from 0 to 7 years, and von Bertalanffy growth models for males and females were not significantly different. Von Bertalanffy growth model parameters were L∞=219.9 mm SL, k =0.33/yr, and t0 =–1.10 years for all fish combined. High gonadosomatic indices during October–December indicated that some spawning may occur in Tampa Bay. Estimated lengths at 50% maturity were 132 mm SL for males and 131 mm SL for females. Total instantaneous mortality rates derived from the Chapman-Robson estimator ranged from 0.88 to 1.08/yr, and natural mortality was estimated to be 0.78/yr. In Gulf of Mexico waters, pinfish catch rates declined with increasing depth, and most pinfish were caught in <17 m of water. Length distributions showed that pinfish segregate by size with increasing depth.

Catálogo de ejemplares tipo de la colección ictiológica del Museo de La Plata

La colección actualmente contiene alrededor de 11000 lotes catalogados, que representan más de 400 especies marinas y de agua dulce, de los cuales 3500 se encuentran digitalizados en el sistema de colecciones del Museo. Es importante destacar que las colecciones del Museo forman parte del Sistema Nacional de Datos Biológicos que tiene como misión conformar una base de ProBiota, Serie Técnica y Didáctica Nº 23 – 2014 VI datos unificada de información biológica, a partir de datos taxonómicos, ecológicos, cartográficos, bibliográficos, etnobiológicos, de uso y de catálogos sobre recursos naturales y otros temas afines. Por otra parte, y a modo de resguardo, los registros se continúan asentando en un libro foliado. Su reciente recatalogación ha permitido recuperar algunos materiales de sumo interés y ordenar especimenes tipo existentes, como así también verificar la ausencia de otros, ejemplo, Micropogon barretoi Mac Donagh (1934) cuyo holotipo está asentado en el libro de registros pero nunca pudo ser encontrado. Actualmente la colección cuenta con 28 holotipos y 407 paratipos pertenecientes a 6 órdenes, 13 familias y 49 especies y 4 subespecies los que fueron ordenados sistemáticamente siguiendo el criterio de Nelson (2006). El listado de las especies fue ordenado alfabéticamente. Se incluye el nombre de la especie, los autores, el año de publicación, la página de la diagnosis, figuras y tablas. Cada lote lleva la siguiente información: acrónimo, número de catálogo, número de ejemplares, longitud estándar, localidad, colectores, fecha de captura y observaciones.

El Niño reconstructions and confirmation of a pan-Californian model via Radiolarian evidence

Radiolarian number and/or flux rates extracted from Holocene and fossil sediments are used to help detect the presence of, type of (weak or strong), and exact location of the depocenter under an El Niño. These data, along with known provenances of certain radiolarians, support an earlier model that suggests a weak El Niño is a northern and coupled expression of a more southerly strong component dominated by eastern tropical Pacific water underlain by California current and gyre water.

Sediment flux at selected coastal sites: proposed time series measurment by particle traps

Particle flux in the ocean reflects ongoing biological and geological processes operating under the influence of the local environment. Estimation of this particle flux through sediment trap deployment is constrained by sampler accuracy, particle preservation, and swimmer distortion. Interpretation of specific particle flux is further constrained by indeterminate particle dispersion and the absence of a clear understanding of the sedimentary consequences of ecosystem activity. Nevertheless, the continuous and integrative properties of the particle trap measure, along with the logistic advantage of a long-term moored sampler, provide a set of strategic advantages that appear analogous to those underlying conventional oceanographic survey programs. Emboldened by this perception, several stations along the coast of Southern California and Mexico have been targeted as coastal ocean flux sites (COFS).

Monoculture of marine planktonic diatoms and the effects of different media on their growth and survival

Diatoms are the preferred live food of the protozoea stages of prawns. Due to seasonal variations, it is difficult to obtain continuous supply of diatoms and other algae throughout the year. Therefore mass culture of diatoms is necessary. At attempt was made to culture planktonic diatoms and to study the effect of Allen and Nelson media, Simon media, Vitamin B12 and treated sewage water media on their growth and survival. Navicula sp showed better growth in Allen and Nelson media, Coscinodiscus and Chaetoceros grew better in Simon media while Navicula sp and Coscinodiscus sp showed better growth in the combination of Allen and Nelson + Vitamin B12.

Video tracking using dual-treewavelet polar matching and particle filtering

In this paper, we describe a video tracking application using the dual-tree polar matching algorithm. The models are specified in a probabilistic setting, and a particle ilter is used to perform the sequential inference. Computer simulations demonstrate the ability of the algorithm to track a simulated video moving target in an urban environment with complete and partial occlusions. © The Institution of Engineering and Technology.

Mutation analysis of a large Chinese pedigree with congenital preaxial polydactyly

Mutations in the long-range limb-specific cis-regulator (ZRS) could cause ectopic shh gene expression and are responsible for preaxial polydactyly (PPD). In this study, we analyzed a large Chinese isolated autosomal dominant PPD pedigree. By fine mapping

Association of early growth response-1 gene polymorphisms with total IgE and atopy in asthmatic children

Early growth response-1 (Egr-1) is expressed in human airways and found to modulate tumor necrosis factor, immunoglobulin E (IgE), airway responsiveness, and interleukin-13-induced inflammation in mice. We investigated the effects of Chinese-tagging singl

Polymorphisms of the estrogen receptor alpha (ESR1) gene and the risk of Alzheimer's disease in a southern Chinese community

Background: Alzheimer's disease (AD) is a neurodegenerative disease with a higher prevalence in women. Expression of estrogen receptor 1 (ESR1) gene has been identified throughout the brain. Owing to the putative neuroprotective effects of estrogen, estro