Population and landscape genetics of the stone marten and red fox in Portugal : implications for conservation management of common carnivores

Tese de doutoramento, Biologia (Biologia da Conservação), Universidade de Lisboa, Faculdade de Ciências, 2015

O b-learning e a língua estrangeira no ensino profissional : conceção, desenvolvimento, aplicação e avaliação de um red

Trabalho de projeto de mestrado, Educação (Especialidade em Educação e Tecnologias Digitais), 2015

A novel method to count the red blood cells in thin blood films

This paper describes a novel idea to identify the total number of red blood cells (RBCs) as well as their location in a Giemsa stained thin blood film image. This work is being undertaken as a part of developing an automated malaria parasite detection system by scanning a photograph of thin blood film in order to evaluate the parasitemia of the blood. Not only will this method eliminates the segmentation procedures that are normally used to segment the cells in the microscopic image, but also avoids any image pre-processing to deal with non uniform illumination prior to cell detection. The method utilizes basic knowledge on cell structure and brightness of the components due to Giemsa staining of the sample and detects and locates the RBCs in the image.

The Church of the Abandoned Christ: David Peace's 'Red Riding Quartet' and the Wreck of the White Ship

David Peace’s novel Nineteen Seventy-seven concludes with the hack journalist Jack Whitehead being granted a terrifying apocalyptic vision, seconds before he is trepanned with a Phillips screwdriver by the sinister Reverend Martin Laws. Included in this vision is a curious reference to the wreck of the White Ship, a maritime disaster in 1120 that drowned William Atheling, heir to the English throne, and ultimately doomed England to years of civil war. This article explores Peace’s strange use of the shipwreck in his “Red Riding Quartet,” particularly the way he links it—in the quartet’s final volume, Nineteen Eighty Three—to a revisionist account of the aftermath of the crucifixion that leads a wounded Christ to a tragic death in the cold waters of the English Channel.

Red cell PMVs, plasma membrane-derived vesicles calling out for standards

Plasma membrane-derived vesicles (PMVs) or microparticles are vesicles (0.1–1 μm in diameter) released from the plasma membrane of all blood cell types under a variety of biochemical and pathological conditions. PMVs contain cytoskeletal elements and some surface markers from the parent cell but lack a nucleus and are unable to synthesise macromolecules. They are also defined on the basis that in most cases PMVs express varying amounts of the cytosolic leaflet lipid phosphatidylserine, which is externalised during activation on their surface. This marks the PMV as a biologically distinct entity from that of its parent cell, despite containing surface markers from the original cell, and also explains its role in events such as phagocytosis and thrombosis. There is currently a large amount of variation between investigators with regard to the pre-analytical steps employed in isolating red cell PMVs or RPMVs (which are slightly smaller than most PMVs), with key differences being centrifugation and sample storage conditions, which often leads to result variability. Unfortunately, standardization of preparation and detection methods has not yet been achieved. This review highlights and critically discusses the variables contributing to differences in results obtained by investigators, bringing to light numerous studies of which RPMVs have been analysed but have not yet been the subject of a review.

New insights into host-parasite ubiquitin proteome dynamics in P. falciparum infected red blood cells using a TUBEs-MS approach

Malaria, caused by Plasmodium falciparum (P. falciparum), ranks as one of the most baleful infectious diseases worldwide. New antimalarial treatments are needed to face existing or emerging drug resistant strains. Protein degradation appears to play a significant role during the asexual intraerythrocytic developmental cycle (IDC) of P. falciparum. Inhibition of the ubiquitin proteasome system (UPS), a major intracellular proteolytic pathway, effectively reduces infection and parasite replication. P. falciparum and erythrocyte UPS coexist during IDC but the nature of their relationship is largely unknown. We used an approach based on Tandem Ubiquitin-Binding Entities (TUBEs) and 1D gel electrophoresis followed by mass spectrometry to identify major components of the TUBEs-associated ubiquitin proteome of both host and parasite during ring, trophozoite and schizont stages. Ring-exported protein (REX1), a P. falciparum protein located in Maurer's clefts and important for parasite nutrient import, was found to reach a maximum level of ubiquitylation in trophozoites stage. The Homo sapiens (H. sapiens) TUBEs associated ubiquitin proteome decreased during the infection, whereas the equivalent P. falciparum TUBEs-associated ubiquitin proteome counterpart increased. Major cellular processes such as DNA repair, replication, stress response, vesicular transport and catabolic events appear to be regulated by ubiquitylation along the IDC P. falciparum infection.

Solubility of red 153 and blue 1 in supercritical carbon dioxide

Solubilities of red 153, (3-[[4-[[5,6(or 6,7)-dichloro-2-benzothiazolyl]azo]phenyl]ethylamino]propanenitrile), an azo compound, and disperse blue1 (1,4,5,8-tetraaminoantraquinone) in supercritical carbon dioxide (SC CO(2)) were measured at T = (333.2 to 393.2) K over the pressure range (12.0 to 40.0) MPa by a flow type apparatus. The solubility of red 153 (0.985. 10(-6) to 37.2. 10(-6)) in the overall region of measurements is found to be significantly higher than that of disperse blue 1 (1.12.10(-7) to 4.89.10(-7)). The solubility behavior of disperse red 153 follows the general solubility trend displayed by disperse dyes with a crossover pressure at about 20 MPa. On the other hand, blue 1, which is a disperse anthraquinone dye, exhibits unexpected behavior not recorded previously there is no crossover pressure at the temperature and pressure ranges studied, and the dye's solubility at T = 333.2 K practically does not increase with pressure. To the best of our knowledge, there are no previous measurements of blue 1 solubility in SC CO(2) reported in the literature. The experimental data were correlated by using the Soave Redlich Kwong equation of state (EoS) with the one-fluid van der Waals mixing rule, and an acceptable correlation of the solubility data for both dyes was obtained.

Red nacional para el estudio de los incendios forestales y sus efectos en los suelos – RIS./ Rede nacional para o estudo dos Incêndios florestais e seus efeitos nos Solos

En enero de 2014, continuando con la intención expresada en Guimarães (Portugal), en noviembre de 2013, durante la VII Reunión de la Geografía Física y Medio Ambiente (EGFA VII), la Asociación Portuguesa de Prevención de Riesgos y Seguridad (RISCOS) creó las condiciones para el establecimiento de una sección temática dedicada al estudio de los efectos de los incendios sobre los suelos y que vendría a ser conocida “Red Nacional para el Estudio de los Incendios Forestales y sus Efectos sobre los Suelos” (RIS). Esta fue una iniciativa inspirada en Fuegored (Red Temática Nacional Efectos de los Incendios Forestales sobre los Suelos) y que, de esta manera, desea establecer una red nacional de investigadores con el fin de facilitar la promoción y difusión de los resultados de sus pesquisas científicas sobre este tema, realizadas en Portugal, así como la interacción entre el mundo científico y el manejo forestal . La RIS fue fundada por 12 miembros, que representan 7 universidades portuguesas y en la actualidad cuenta con 23 miembros de 9 universidades y escuelas politécnicas. Se espera que crezca y que puede añadir todos los que participan en la investigación científica de los incendios forestales y sus efectos en los suelos.

Light harvesting in solar cells using natural pigments from red fruits adsorbed to mesoporous TiO2

Nature has developed strategies to present us with a wide variety of colours, from the green of leaves to the bright colours seen in flowers. Anthocyanins are between these natural pigments that are responsible for the great diversity of colours seen in flowers and fruits. Anthocyanins have been used to sensitize titanium dioxide (TiO2) in Dye-Sensitized Solar Cells (DSSCs). DSSCs have become one of the most popular research topic in photovoltaic cells due to their low production costs when compared to other alternatives. DSSCs are inspired in what happens in nature during photosynthesis. A primary charge separation is achieved by means of a photoexcited dye capable of performing the electron injection into the conduction band of a wide band-gap semiconductor, usually TiO2. With this work we aimed to synthesize a novel mesoporous TiO2 structure as the semiconductor in order to increase the dye loading. We used natural occurring dyes such as anthocyanins and their synthetic flavylium relatives, as an alternative to the widely used metal complexes of Ru(II) which are expensive and are environmentally unsafe. This offers not only the chance to use safer dyes for DSSCs, but also to take profit of waste biological products, such as wine and olive oil production residues that are heavily loaded with anthocyanin dyes. We also performed a photodegradation study using TiO2 as the catalyst to degrade dye contaminants, such as those from the wine production waste, by photo-irradiation of the system in the visible region of the light spectrum. We were able to succeed in the synthesis of mesoporous TiO2 both powder and thin film, with a high capacity to load a large amount of dye. We proved the concept of photodegradation using TiO2 as catalyst. And finally, we show that wine production waste is a possible dye source to DSSCs application.

Subcellular fractionation of stored red blood cells reveals a compartment-based protein carbonylation evolution.

During blood banking, erythrocytes undergo storage lesions, altering or degrading their metabolism, rheological properties, and protein content. Carbonylation is a hallmark of protein oxidative lesions, thus of red blood cell oxidative stress. In order to improve global erythrocyte protein carbonylation assessment, subcellular fractionation has been established, allowing us to work on four different protein populations, namely soluble hemoglobin, hemoglobin-depleted soluble fraction, integral membrane and cytoskeleton membrane protein fractions. Carbonylation in erythrocyte-derived microparticles has also been investigated. Carbonylated proteins were derivatized with 2,4-dinitrophenylhydrazine (2,4-DNPH) and quantified by western blot analyses. In particular, carbonylation in the cytoskeletal membrane fraction increased remarkably between day 29 and day 43 (P<0.01). Moreover, protein carbonylation within microparticles released during storage showed a two-fold increase along the storage period (P<0.01). As a result, carbonylation of cytoplasmic and membrane protein fractions differs along storage, and the present study allows explaining two distinct steps in global erythrocyte protein carbonylation evolution during blood banking. This article is part of a Special Issue entitled: Integrated omics.

Comportamiento de la red de arrastre de fondo (Cr. BIC SNP-1, 9505-06)

Presenta las principales características del comportamiento de la red de arrastre de fondo tipo Granton 400/127 utilizada durante el crucero de evaluación del recurso merluza efectuada en otoño de 1995. Se analiza la captura por subáreas y por estrato de profundidad, observadas en 100 lances de comprobación. Se dan resultados de la geometría de la red de arrastre en sus diferentes niveles. Se obtiene la relación de la profundidad con la longitud del cable para cada estrato de profundidad; así mismo, de la ruptura por unidad de esfuerzo por subárea.

Geometría de la red de arrastre de fondo utilizada en la prospección de recursos pelágico costeros y demersales costeros E/E Huamanga 9611-12

Describe las actividades de rastreo del E/E Huamanga, que efectuó del 01 al 18 de diciembre de 1996, entre Puerto Pizarro y Callao. Se demuestra la longitud del cable principal de arrastre y la profundidad que se determinó en una proporción de 3:1. Así mismo, la correspondencia entre los parámetros de abertura vertical y horizontal de la boca de red en función a la velocidad de arrastre, la misma que fue inversa y directamente proporcional teniendo un alto grado de correlación.

Comportamiento de la red de arrastre de fondo granton 400/127 en la evaluación de los recursos demersales. Invierno 1996

Resultados del monitoreo del comportamiento de la red Granton 400/127, utilizada durante el crucero de evaluación de recursos demersales del Crucero BIC SNP-1 9607-08. Se analizan mediante modelos de regresión lineal y múltiple transformada, las relaciones entre los principales factores que intervienen en la geometría de la red de arrastre de fondo. Se desprende que existe una gran variación entre la abertura horizontal (AH) abertura vertical (AV) y área de la boca de la red, a mayor profundidad (Estrato II y III), debido a la configuración del fondo, velocidad de arrastre, cantidad de cable principal, condiciones de corrientes, etc.

Respuesta selectiva de la red de fondo granton 400/127 en el estudio de recursos demersales. Invierno 1966

Se estudia la respuesta selectiva de la red de la arrastre de fondo Granton 400/127, durante el crucero de evaluación de recursos demersales a bordo del BIC SNP-1 9607-08, empleando el método de copo cubierto, con un tamaño de malla de 90 mm (Poliamida PA-nylon). Se obtuvieron las ojivas de selección mediante los métodos de ojiva natural y curva logística, para la zona de pesca de Paita (03°30 ' S- 06°00 'S), presentando un L50% =35,9 y 35,71 cm respectivamente. Se encontró un factor de selección (FS) = 3,95, factor de perímetro (FP) = 0,46 y un máximo factor de selección igual a 4,34. Los resultados fueron mayores que en el experimento modelo de selectividad con red de arrastre de fondo, realizado en verano de 1996.

Experimento modelo de selectividad con red de arrastre de fondo

Presentan los resultados obtenidos del estudio de selectividad en merluza peruana (Merluccius gayi peruanus) con una red de arrastre de fondo, en el área pesquera de Paita (03° a 05° S), basado en el método de copo cubierto (POPE et al. 1975) con diferentes tamaños de malla (poliamida PA-nylon), 90, 105, 110 y 120 mm. Se observó que la diferencia entre el factor de selección calculado por los distintos análisis para la mallas 105 (106) mm y 110 (114) mm no fue significativa, razón por la cual fueron seleccionadas para aplicar los modelos matemáticos adicionales de GULLAND 1970 y BARANOV 1960, determinándose el tamaño óptimo de malla de 110 mm. El factor de selección (FS) para la malla de 90(90,8)mm fue igual a 3,41; para la malla de 105 (106) mm, igual a 3,03; para la malla de 110 (114) mm fue igual a 2,99; para la malla de 120 (122) mm, fue igual a 2,84.