Characterization of the products of aniline peroxydisulfate oligo/polymerization in media with different pH by resonance Raman spectroscopy at 413.1 and 1064 nm excitation wavelengths

The pH-structure correlation of the products of aniline peroxydisulfate reaction was mainly investigated by resonance Raman spectroscopy. The reactions of aniline and ammonium peroxydisulfate were carried out in aqueous solutions of initial pH ranging from 4.9 to 13.2 and monomer/oxidant molar ratio of 4/1. For an initial pH of 4.9, the spectroscopic techniques showed that the emeraldine salt form of polyaniline (PANI-ES) is the main product, corroborating that the usual head-to-tail coupling mechanism is taking place. The resonance Raman spectra at 1064 nm exciting wavelength were useful to detect the emeraldine salt as a minor product for reactions at an initial pH of 5.3-11.5. The Raman spectra of the main product of the reaction at initial pH of 13.2 excited at 1064 and 413.1 nm showed new spectral features consistent with 1,4-Michael-type adducts of aniline monomers and 1,4-benzoquinone-monoimine unit. These compounds and their products of hydrolysis/oxidation are the predominant species for the reaction media of initial pH from 5.3 to 13.2. In order to get PANI with different nanoscale morphologies, a pH value of more than 0 or 1 was used in the aniline polymerization. The spectroscopic data obtained in this work reveal that head-to-tail coupling does not occur when aniline reacts at media pH higher than about 5. It is suggested that chemical structures of the products of aniline oxidation by an unusual mechanism are the driving force for the development of assorted morphologies. Copyright (C) 2011 John Wiley & Sons, Ltd.

Solvatochromic and lonochromic Effects of Iron(II)bis-(1,10-phenanthroline)dicyano: a Theoretical Study

Solvatochromic and ionochromic effects of the iron(II)bis(1,10-phenanthroline)dicyano (Fe(phen)(2)(CN)(2)) complex were investigated by means of combined DFT/TDDFT calculations using the PBE and B3LYP functionals. Extended solvation models of Fe(phen)(2)(CN)(2) in acetonitrile and aqueous solution, as well as including interaction with Mg(2+), were constructed. The calculated vertical excitation energies reproduce well the observed solvatochromism in acetonitrile and aqueous solutions, the ionochromism in acetonitrile in the presence of Mg(2+), and the absence of ionochromic effect in aqueous solution. The vertical excitation energies and the nature of the transitions were reliably predicted after inclusion of geometry relaxation upon aqueous micro- and global solvation and solvent polarization effect in the TDDFT calculations. The two intense UV-vis absorption bands occurring for all systems studied are interpreted as transitions from a hybrid Fe(II)(d)/cyano N(p) orbital to a phenanthroline pi* orbital rather than a pure metal-to-ligand-charge transfer (MLCT). The solvatochromic and ionochromic blue band shifts of Fe(phen)(2)(CN)(2) were explained with preferential stabilization of the highest occupied Fe(II)(d)/cyano N(p) orbitals as a result of specific interactions with water solvent molecules or Mg(2+) ions in solution. Such interactions occur through the CN(-) groups in the complex, and they have a decisive role for the observed blue shifts of UV-vis absorption bands.

Photoswitches and Luminescent Rigidity Sensors Based on fac-[Re(CO)(3)(Me(4)phen)(L)](+)

The fac-[Re(CO)(3)(Me(4)phen)(trans-L)](+) complexes, Me(4)phen = 3,4,7,8-tetramethyl-1,10-phenanthroline and L = 4-styrylpyridine, stpy, or 1,2-bis(4-pyridyl)ethylene, bpe, were synthesized and characterized by their spectroscopic, photochemical, and photophysical properties. The complexes exhibit trans-to-cis isomerization upon 313, 334, 365, and 404 nm irradiation, and the true quantum yields can be efficiently determined by absorption changes combined with (1)H NMR data. For fac-[Re(CO)(3)(Me(4)phen)(trans-bpe)](+) similar quantum yields were determined at all wavelengths investigated. However, a lower value (phi(true) = 0.35) was determined for fac-[Re(CO)(3)(Me(4)phen)(trans-stpy)](+) at 404 nm irradiation, which indicates different pathways for the photoisomerization process. The photoproducts, fac-[Re(CO)(3)(Me(4)phen)(cis-L)](+), exhibit luminescence at room temperature with two maxima ascribed to the (3)IL(Me4phen) and (3)MLCT(Re -> Me4phen) excited states. The luminescence properties were investigated in different media, and the behavior in glassy EPA at 77 K showed that the contribution of each emissive state is dependent on the excitation wavelength. The photochemical and photophysical behavior of the complexes were rationalized in terms of the energy gap of excited states and can be exploited in photoswitchable luminescent rigidity sensors.

Studies on the resonance Raman spectra of polyaniline obtained with near-IR excitation

The effects of near-IR (NIR) laser power over the Raman spectra of poly(aniline) emeraldine salt (PANIES) and base (PANI-EB) were investigated. The reasons for the existence of several bands from 1324 to 1500 cm-1 in the Raman spectra of poly(aniline) obtained at NIR region were also studied. The bands from 1324 to 1375 cm-` were associated to vC-N of polarons with different conjugation lengths and the bands from 1450 to 1500 cm-1 in Raman spectra of PANI emeraldine and pernigraniline base forms were correlated to vC=N modes associated with quinoid units having different conjugation lengths. The increase of laser power at 1064.0 run causes the deprotonation of PANI-ES and the formation of cross-linking segments having phenazine and/or oxazine rings. For PANI-EB only a small spectral change is observed when the laser power is increased, owing to the low absorption of this form in the NIR region. Copyright (c) 2007 John Wiley & Sons, Ltd.

Luminescence enhancement of the Tb(III) ion with the thenoyltrifluoroacetonate ligand acting as an efficient sensitizer

The synthesis, structural investigation, and photophysical properties of the complex [Tb(TTA)(2)(NO(3)) (TPPO)(2)] are reported. Unlike the analog tris-diketonate complex [Tb(TTA)(3)(TPPO)(2)], the new complex presents abnormally high luminescence intensity centered on the terbium ion. Our results clearly suggest a higher energy transfer efficiency from the TEA antenna ligand to the Tb(III) ion in the bis-diketonate complex compared with that in the tris-diketonate complex. A mechanism involving the increasing of triplet state energy when one TTA ligand is replaced by the NO(3)(-) group in the first coordination sphere is suggested and experimentally investigated to explain the anomalous luminescence properties of the new complex [Tb(TTA)(2)(NO(3))(TPPO)(2)]. (C) 2010 Elsevier B.V. All rights reserved.

Overexpression of Nrp/b (nuclear restrict protein in brain) suppresses the malignant phenotype in the C6/ST1 glioma cell line

Upon searching for glucocorticoid-regulated cDNA sequences associated with the transformed to normal phenotypic reversion of C6/ST1 rat glioma cells, we identified Nrp/b (nuclear restrict protein in brain) as a novel rat gene. Here we report on the identification and functional characterization of the complete sequence encoding the rat NRP/B protein. The cloned cDNA presented a 1767 nucleotides open-reading frame encoding a 589 aminoacids residues sequence containing a BTB/POZ (broad complex Tramtrack bric-a-brac/Pox virus and zinc finger) domain in its N-terminal region and kelch motifs in its C-terminal region. Sequence analysis indicates that the rat Nrp/b displays a high level of identity with the equivalent gene orthologs from other organisms. Among rat tissues, Nrp/b expression is more pronounced in brain tissue. We show that overexpression of the Nrp/b cDNA in C6/ST1 cells suppresses anchorage independence in vitro and tumorigenicity in vivo, altering their malignant nature towards a more benign phenotype. Therefore, Nrp/b may be postulated as a novel tumor suppressorgene, with possible relevance for glioblastoma therapy. (C) 2009 Elsevier Ltd. All rights reserved.

Sdo1p, the yeast orthologue of Shwachman-Bodian-Diamond syndrome protein, binds RNA and interacts with nuclear rRNA-processing factors

The Shwachman-Bodian-Diamond syndrome protein (SBDS) is a member of a highly conserved protein family of not well understood function, with putative orthologues found in different organisms ranging from Archaea, yeast and plants to vertebrate animals. The yeast orthologue of SBDS, Sdo1p, has been previously identified in association with the 60S ribosomal subunit and is proposed to participate in ribosomal recycling. Here we show that Sdo1p interacts with nucleolar rRNA processing factors and ribosomal proteins, indicating that it might bind the pre-60S complex and remain associated with it during processing and transport to the cytoplasm. Corroborating the protein interaction data, Sdo1p localizes to the nucleus and cytoplasm and co-immunoprecipitates precursors of 60S and 40S subunits, as well as the mature rRNAs. Sdo1p binds RNA directly, suggesting that it may associate with the ribosomal subunits also through RNA interaction. Copyright (C) 2009 John Wiley & Sons, Ltd.

Axial ligand influence on geometries, charge distributions and electronic structures of iron tetraazamacrocycle [Fe((II))TIM(X)(Y)](2+) complexes assessed by Density Functional Theory

We employed the Density Functional Theory along with small basis sets, B3LYP/LANL2DZ, for the study of FeTIM complexes with different pairs of axial ligands (CO, H(2)O, NH(3), imidazole and CH(3)CN). These calculations did not result in relevant changes of molecular quantities as bond lengths, vibrational frequencies and electronic populations supporting any significant back-donation to the carbonyl or acetonitrile axial ligands. Moreover, a back-donation mechanism to the macrocycle cannot be used to explain the observed changes in molecular properties along these complexes with CO or CH(3)CN. This work also indicates that complexes with CO show smaller binding energies and are less stable than complexes with CH(3)CN. Further, the electronic band with the largest intensity in the visible region (or close to this region) is associated to the transition from an occupied 3d orbital on iron to an empty pi* orbital located at the macrocycle. The energy of this Metal-to-Ligand Charge Transfer (MLCT) transition shows a linear relation to the total charge of the macrocycle in these complexes as given by Mulliken or Natural Population Analysis (NPA) formalisms. Finally, the macrocycle total charge seems to be influenced by the field induced by the axial ligands. (C) 2011 Elsevier Ltd. All rights reserved.

Nuclear magnetic resonance characterization of metabolite disorder in orange trees caused by citrus sudden death disease

Citrus sudden death (CSD) is a new disease of sweet orange and mandarin trees grafted on Rangpur lime and Citrus volkameriana rootstocks. It was first seen in Brazil in 1999, and has since been detected in more than four million trees. The CSD causal agent is unknown and the current hypothesis involves a virus similar to Citrus tristeza virus or a new virus named Citrus sudden death-associated virus. CSD symptoms include generalized foliar discoloration, defoliation and root death, and, in most cases, it can cause tree death. One of the unique characteristics of CSD disease is the presence of a yellow stain in the rootstock bark near the bud union. This region also undergoes profound anatomical changes. In this study, we analyse the metabolic disorder caused by CSD in the bark of sweet orange grafted on Rangpur lime by nuclear magnetic resonance (NMR) spectroscopy and imaging. The imaging results show the presence of a large amount of non-functional phloem in the rootstock bark of affected plants. The spectroscopic analysis shows a high content of triacylglyceride and sucrose, which may be related to phloem blockage close to the bud union. We also propose that, without knowing the causal CSD agent, the determination of oil content in rootstock bark by low-resolution NMR can be used as a complementary method for CSD diagnosis, screening about 300 samples per hour.

Nuclear magnetic resonance water relaxation time changes in bananas during ripening: a new mechanism

BACKGROUND: Nuclear magnetic resonance studies of banana fragments during ripening show an increase on the water transverse relaxation time (T(2)) and a decrease in water self-diffusion coefficient (D). As T(2) and D are normally directly correlated, we studied these two properties in intact bananas during ripening, in an attempt to rule out the effect of injury on the apparent discrepancies in the behavior of T(2) and D. RESULTS: The results show that injury in bananas causes a decrease in T(2) of the water in vacuoles (T(2vac)). They also show that T(2vac) increased and D decreased during ripening, ruling out the injury effect. To explain the apparent discrepancies, we propose a new hypothesis for the increase in T(2) values, based on the reduction of Fe(3+) ions to Fe(2+) by galacturonic acid, produced by the hydrolysis of pectin and a decrease in internal oxygen concentration during ripening. CONCLUSION: As injury alters T(2) values it is necessary to use intact bananas to study relaxation times during ripening. The novel interpretation for the increase in T(2vac) based on reduction of Fe(+3) and O(2) concentration is an alternative mechanism to that based on the hydrolysis of starch in amyloplasts. (C) 2010 Society of Chemical Industry

Fast and Simple Nuclear Magnetic Resonance Method To Measure Conjugated Linoleic Acid in Beef

Conjugated linoleic acids (CLAs) are a group of linoleic acid isomers that are naturally found in food products originating from ruminants (meat and dairy). These acids have received special attention in recent years due to their potential human health benefits. Research efforts have been proposed to increase the CLA content in beef to improve public health. However, because there are more than 30 million beef cattle used each year by the American food industry, it will be necessary to ensure their content in a large number of samples. Therefore, it is important to have an inexpensive and rapid analytical method to measure CLA content in food products. Because gas chromatography (GC), a current popular method for measuring CLAs, is slow, this paper describes a nuclear magnetic resonance spectroscopy ((1)H NMR) method that is potentially >10 times faster than the GC method. Analyses show a correlation coefficient of 0.97, indicating the capacity of NMR to quantify the CLA content in beef samples. Furthermore, the method proposed herein is simple and does not require sophisticated sample preparation.

Mapping of Diepoxybutane Damage in the Cytochrome b Domain of Mitochondrial DNA and the β-globin Domain of Nuclear Chicken DNA Using Quantitative PCR

Diepoxybutane (DEB), a known industrial carcinogen, reacts with DNA primarily at the N7 position of deoxyguanosine residues and creates interstrand cross-links at the sequence 5'-GNC. Since N7-N7 cross-links cause DNA to fragment upon heating, quantative polymerase chain reaction (QPCR) is being used in this experiment to measure the amount of DEB damage (lesion frequency) with three different targets-mitochondrial (unpackaged), open chromatin region, and closed chromatin region. Initial measurements of DEB damage within these three targets were not consistent because the template DNA was not the limiting reagent in the PCR. Follow-up PCR trials using a limiting amount of DNA are still in progress although initial experimentation looks promising. Sequencing of these three targets to confirm the primer targets has only been successfully performed for the closed chromatin target and does not match the sequence from NIH used to design that primer pair. Further sequencing trials need to be conducted on all three targets to assure that a mitochondrial, open chromatin, and closed chromatin region are actually being amplified in this experimental series.

Métodos numéricos para a integração das equações da cinética pontual de um reator nuclear

As equações da cinétiica pontual de um reator nuclear térmico são integradas numericamente, utilizando um método matricial de continuação analitica. Essas equações são essencialmente não-negativas e possuem um autovalor dominante vinculado à reatividade do sistema. Também, descrevem-se os métodos de Hansen e Porsching.

Avaliação morfométrica e densimétrica através de assinatura nuclear digital em biópsias de esôfago

Foram estudadas, pelo método da assinatura digital, 35 biópsias esofágicas provenientes de pacientes da província de Linxian, China, classificadas por dois observadores com ampla experiência em patologia gastrointestinal como normais, displasias ou carcinomas (8 casos normais, 6 displasias leves, 8 displasias moderadas, 4 displasias acentuadas, 4 carcinomas suspeitos de invasão e 5 carcinomas invasores). O objetivo do trabalho foi caracterizar os núcleos das populações celulares desses casos de forma que permitisse a derivação de informações diagnósticas e de possível implicação prognóstica a partir do estudo quantitativo das características nucleares de cada caso ou categoria diagnóstica. As biópsias foram coradas pelo método de Feulgen, sendo então selecionados e digitalizados 48 a 50 núcleos de cada uma delas. De cada núcleo foram extraídas 93 características cariométricas, arranjadas arbitrariamente em histograma designado como assinatura nuclear. Da média aritmética de cada característica dos núcleos de uma mesma biópsia resultou a assinatura digital do caso. A análise de funções discriminantes, baseada nas 15 características cariométricas que ofereceram melhor discriminação entre as categorias diagnósticas, mostrou que o grupo classificado como normal foi claramente distinto das demais categorias. A densidade óptica total aumentou progressivamente segundo a classificação das biópsias, do normal à displasia acentuada, sendo o valor do carcinoma semelhante ao da displasia moderada. A matriz de comprimento de seqüência apresentou o mesmo perfil, ou seja, ambas as características ofereceram discriminação clara entre as categorias diagnósticas, com exceção do carcinoma invasor, cujos valores foram superponíveis aos da displasia moderada. O estudo demonstrou a viabilidade da quantificação de características nucleares através das assinaturas nucleares digitais, que demonstraram diferenças estatisticamente significativas entre diferentes categorias diagnósticas e a elevação progressiva dos valores mensurados relacionados com o espectro das lesões, apresentando-as como um histograma (assinatura digital nuclear).

Estrutura nuclear de estrelas compactas

Este trabalho tem como objetivo o estudo da matéria nuclear a altas densidades considerando-se as fases hadrônica e de quarks à temperatura nula e finita, com vistas a aplicações no estudo de propriedades estáticas globais de estrelas compactas. Parte dos cálculos apresentados nesta dissertação foram realizados por diferentes autores. Entretanto, em geral, estes trabalhos limitaram-se ao estudo da matéria nuclear em regiões de densidades e temperaturas específicas. Este estudo visa, por sua vez, o desenvolvimento de um tratamento amplo e consistente para estes sistemas, considerando-se diferentes regimes de densidade e temperatura para ambas as fases, hadrônica e de quarks. Buscamos com isso adquirir conhecimento suficiente que possibilite, não somente a ampliação do escopo dos modelos considerados, como também o desenvolvimento, no futuro, de um modelo mais apropriado à descrição de propriedades estáticas e dinâmicas de estrelas compactas. Ainda assim, este trabalho apresenta novos aspectos e resultados inéditos referentes ao estudo da matéria nuclear, como descrevemos a seguir. No estudo da matéria nuclear na fase hadrônica, consideramos os modelos da teoria quântica de campos nucleares desenvolvidos por J. D. Walecka, J. Zimanyi e S. A. Moszkowski, e por J. Boguta e A. R. Bodmer, e conhecidos, respectivamente, como Hadrodinâmica Quântica, ZM e Não-Linear. Nestes modelos a matéria nuclear é descrita a partir de uma formulação lagrangeana com os campos efetivos dos bárions acoplados aos campos dos mésons, responsáveis pela interação nuclear Neste estudo consideramos inicialmente a descrição de propriedades estáticas globais de sistemas nucleares de muitos corpos à temperatura nula, como por exemplo, a massa efetiva do núcleon na matéria nuclear simétrica e de nêutrons. A equação de estado da matéria de nêutrons possibilita a descrição de propriedades estáticas globais de estrelas compactas, como sua massa e raio, através da sua incorporação nas equações de Tolman, Oppenheimer e Volkoff (TOV). Os resultados obtidos nestes cálculos estão em plena concordância com os resultados apresentados por outros autores. Consideramos posteriormente o estudo da matéria nuclear com graus de liberdade de bárions e mésons à temperatura finita, com particular atenção na região de transição de fase. Para este estudo, incorporamos aos modelos considerados, o formalismo da mecânica estatística à temperatura finita. Os resultados obtidos, para as propriedades da matéria nuclear à temperatura finita, concordam também com os resultados obtidos por outros autores. Um aspecto inédito apresentado neste trabalho refere-se à incorporação de valores para os pontos críticos da transição de fase, ainda não determinados por outros autores. O comportamento do calor específico também é analisado de forma inédita nesta dissertação no tratamento utilizado com os modelos Não-Linear e ZM. Utilizamos a equação de estado da matéria de nêutrons à temperatura finita nas equações TOV, determinando propriedades globais de uma estrela protoneutrônica Observamos neste trabalho que ocorre um aumento da massa máxima da estrela com o aumento da temperatura, comportamento este já previsto por outros autores em diferentes modelos. Posteriormente incorporamos ao formalismo à temperatura finita, o equilíbrio químico, a presença de graus de liberdade leptônicos para elétrons e múons e a neutralidade de carga. Apresentamos nesta etapa do trabalho, uma forma alternativa para a incorporação destes ingredientes, baseada na determinação de uma fração relativa entre os potenciais químicos de prótons e nêutrons, à temperatura nula, extendendo este resultado à temperatura finita. Este procedimento permite a determinação da distribuição de núcleons e léptons no interior de uma estrela protoneutrônica, onde incluímos ainda a presença de neutrinos confinados. No estudo da matéria de quarks, consideramos o modelo de sacola do Massachussets Institute of Technology (MIT). Incorporando as equações TOV neste estudo, determinamos propriedades globais de estrelas de quarks, bem como a distribuição dos diferentes sabores de quarks no interior estelar. Como principal resultado, obtivemos uma equação de estado geral para a matéria hadrônica e de quarks, introduzida nas equações TOV, e analisamos a existência de estrelas híbridas. Os resultados obtidos nesta etapa do trabalho são totalmente coerentes com aqueles obtidos por outros autores.