Consolidation of the genetic and cytogenetic maps of turbot (Scophthalmus maximus) using FISH with BAC clones

Bacterial artificial chromosomes (BAC) have been widely used for fluorescence in situ hybridization (FISH) mapping of chromosome landmarks in different organisms, including a few in teleosts. In this study, we used BAC-FISH to consolidate the previous genetic and cytogenetic maps of the turbot (Scophthalmus maximus), a commercially important pleuronectiform. The maps consisted of 24 linkage groups (LGs) but only 22 chromosomes. All turbot LGs were assigned to specific chromosomes using BAC probes obtained from a turbot 5x genomic BAC library. It consisted of 46,080 clones with inserts of at least 100 kb and < 5 % empty vectors. These BAC probes contained gene-derived or anonymous markers, most of them linked to quantitative trait loci (QTL) related to productive traits. BAC clones were mapped by FISH to unique marker-specific chromosomal positions, which showed a notable concordance with previous genetic mapping data. The two metacentric pairs were cytogenetically assigned to LG2 and LG16, and the nucleolar organizer region (NOR)-bearing pair was assigned to LG15. Double-color FISH assays enabled the consolidation of the turbot genetic map into 22 linkage groups by merging LG8 with LG18 and LG21 with LG24. In this work, a first-generation probe panel of BAC clones anchored to the turbot linkage and cytogenetical map was developed. It is a useful tool for chromosome traceability in turbot, but also relevant in the context of pleuronectiform karyotypes, which often show small hardly identifiable chromosomes. This panel will also be valuable for further integrative genomics of turbot within Pleuronectiformes and teleosts, especially for fine QTL mapping for aquaculture traits, comparative genomics, and whole-genome assembly.

Amazon forest biomass density maps: tackling the uncertainty in carbon emission estimates

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Relaxation to Fixed Points in the Logistic and Cubic Maps: Analytical and Numerical Investigation

Convergence to a period one fixed point is investigated for both logistic and cubic maps. For the logistic map the relaxation to the fixed point is considered near a transcritical bifurcation while for the cubic map it is near a pitchfork bifurcation. We confirmed that the convergence to the fixed point in both logistic and cubic maps for a region close to the fixed point goes exponentially fast to the fixed point and with a relaxation time described by a power law of exponent -1. At the bifurcation point, the exponent is not universal and depends on the type of the bifurcation as well as on the nonlinearity of the map.

Mapeamento geoambiental de Espírito Santo do Pinhal e Santo Antônio do Jardim (SP)

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

COINCIDENCES OF FIBREWISE MAPS BETWEEN SPHERE BUNDLES OVER THE CIRCLE

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)

Mapeamento geológico-estrutural da Sequência Canto, porção sul do Greenstone Belt do Rio Itapirucu, Bahia

The study area is located in the southern portion of Rio Itapicuru Greenstone Belt, Bahia, where were found rocks that belongs to the Canto Sequence, that comprises felsics and intermediary rocks, beyond metasediments. The studied maps and drill holes help to recognized stratigraphy column that was divided in three mains domains, from the base to the top: andesitics to felsics lavas domain, carbonaceous and metasedimentary domains. The data obtained in mapping and petrography analysis allows classify the area in three deformational phases, Dn, Dn+1, Dn+2. The metamorphism recognized according to the mineralogical associations permitted to classify a progressive regional metamorphism (lower to medium greenchist facies) till biotite zone, falling until chlorite zone due to retrometamorphism. The auriferous mineralizations are mainly related to hydrothermal veins included in the different lithologies, mainly in carbonaceous schists

Carta geotécnica das sub-bacias dos córregos do sossego e do barracão nos municípios de Americana e Santa Bárbara D'Oeste na escala 1:20.000

The Geotechnical Mapping is an extreme important tool for the urban planning, so the public authorities can establish guidelines for medium and long term for a better life conditions for the population. The division region between the cities of Americana and Santa Bárbara D’Oeste has an intense conurbation problem, which is causing problems of occupation in risks areas on environmental terms. In this context this project has as an objective the elaboration of a Geotechnical Map from the sub- basins of Sossego and Barracão rivers, whicht are located in between the area of the two cities, and presents some of the process causes of the conurbation problem. For this study, the following steps were proposed: bibliographic and topographic maps research for better knowledge from the theme and the area, and also preparing cartographic basis; making of preliminary geotechnical area map with a 1:10.000 scale, gather all the information acquired at the previous step and compartmentation of the area; field step to collect more information and soil for the laboratory analysis, objecting the characterization of the geotechnical unities; lab analysis; final geotechnical map preparation; and final report elaboration. The final product of this study is the Final Geotechnical Map, with a 1:10.000 scale, and the principal objective is to help the urban planning

Caracterização metamórfica do Greenstone Belt de Guarinos - GO

The study area comprises Guarinos Greenstone Belt which is located in the centralwest state of Goias and has an approximate size of 280 km2. The present work has as main objective to characterize the metamorphism of the greenstone belt and the relationship between the tectonic events and the metamorphism. For the execution of the work we used data collected in the course Geological Mapping of Crystalline Area of the geology course of UNESP, classes 2009 and 2010, the data collected by Alex Choupina Joaquim Andrade Silva in his master's thesis and the information collected in field in the study area. This compilation of data allows approximately 200 thin sections have been evaluated and allowed the construction of the metamorphic map in scale 1:125.000, also allowed the preparation of the geological map in scale 1:125.000 greestone belt, based on 1:25.000 scale maps performed by students of UNESP and the mapping conducted by Silva (2011). The study area was divided into two tectonic compartments depending on the Shear Zone Engenho Velho that longitudinally crosses study area, with direction approximately NW-SE. The west compartment is bordered by granite-gneiss complex and the east compartment, seems thicker to the south and narrows gradually towards the north and its structure is seen in general as a great monoclinal with NW-SE direction with trim to SW, this way your stack was considered as a package of rocks at the base and metaultramafic metamafic the top, with a second package in tectonic contact, which is composed of detrital and chemical metasedimentary rocks. The east compartment is represented by the intrusion of a large granitic body surrounded by amphibolites and metasediments, is bounded on the east by a granite-gneiss complexes through thrust fault, and is bounded on the west by the other compartment. The structure of the compartment is seen as a major axis oriented roughly... (Completo abstract click electronic access below)

Uso do modelo de simulação 'ABC 6' para avaliação de áreas sujeitas à ocorrência de ondas de cheia e corridas de massa/detritos: estudo de caso na bacia do Ribeirão da Prata (SP)

Pipelines are linear engineering works, designed mostly for transporting oil and its derivatives for long distances, furnishing even the farthermost zones of the country. Due to oil sector needs to ensure for the safety and conservation of its properties, several geotechnical studies are being held at the pipelines field, in order to preserve this important transportation, and also to prevent accidents, which might seriously compromise the environment and the population who lives around it. The OSBRA pipeline, who connects the city of Paulínia to the capital Brasília, is one of these engineering works that deserves to be pointed out. This research, performed at the Ribeirão da Prata Basin, was a pilot study conducted with the main objective of testing the current methodology efficiency, for future applications in the closest watersheds to the OSBRA pipeline. The objective of this research is to analyze flood wave and debris flow processes in a non-fictional watershed, by comparing two different kinds of methods: the first one based on simulation models (software ‘ABC 6’), and the other one by flood wave and debris flow susceptibility mapping. The results from the hydrological modeling were both hydrographs and ietographs that estimated values of outputs and infiltration. To construct the susceptibility maps were necessary three other maps: ground use and occupation maps, divided according to the different protection degrees that were offered to the ground; maps of dam locations in the area and physiographic compartimentation maps, divided according to the local geology. To complete the methodology, the results were collected from both methods for comparison. The obtained product for this methodology was series of data whose different susceptibility degrees to flood wave and debris flow could define the safest route for a pipeline crossing in this watershed...

Geotecnologias na avaliação da suscetibilidade a movimentos de massa no município de Várzea Paulista (SP)

The disordered occupation in several cities in Brazil, is very common, especially during the rainy season, there are numerous cases of gravitational mass movements, with deads of human and builds destruction. The main objective of this work was to identify and map areas to mass movements, through the geo, the municipality of Várzea Paulista, the state of Sao Paulo. For the purpose, were prepared thematic maps of slope, geology, pedology, geomorphology and land use and occupation, which were overlaid using ArcGIS GIS Multicriteria Analysis. Each subject received a weight of influence to the outbreak of such processes and the final result was obtained map of susceptibility to mass movements of the city of Várzea Paulista. This survey found that there are many occupied areas within the city that require monitoring of the Government, especially in the rainy months, because they are in very fragile in terms of geological and geomorphological features. Considering that the data on the physical and natural aspects are scarce in the literature for this region, the results obtained in this study as well as the gathering of information of the physical and cartographic products developed, will greatly contribute to the administration of the municipality, subsidies they provide for the proper use planning and land tenure, pointing out the weak areas of the city geotechnical point of view

Diagnóstico ambiental das áreas de expansão urbana do município de Jaguariúna - SP

The spatial chaotic urban growth is an increasing and common problem in Brazilian cities, especially in the State of São Paulo. In order to assist the territorial expansion planning, the present study aimed to conduct the environmental diagnosis of urban expansion areas in the City of Jaguariúna – SP, bounded by the Municipal Plan. From the preparation and analysis of thematic maps, literature review and field analysis, data were collected for use and occupation, geology, geomorphology, pedology, vegetation, water resources and features surrounding the five urban sprawl existing areas. It was noted, in general, that these areas are suitable for urban occupation, since they show flat geomorphology characteristics, with flattened, medium to large hills, slightly undulated, with low slope, and soils that do not present risks to the deployment of buildings, once properly managed. It was also observed a few water bodies crossing these areas and a few areas with native vegetation beyond permanent protection areas along the rivers. By the analysis of these areas and their surroundings, it was possible to determine on which area the urbanization process can occur more quickly. Thus, the study allows the City of Jaguariúna to perform a more effective occupation planning in these areas, always aiming the sustainable development and, consequently, the improvement in population’s quality of life, as well as the maintenance of environmental quality.

Análises tectono-estratigráfica e faciológico-diagenética da coquina-reservatório Lagoa Feia, Campo de Linguado, Bacia de Campos

A tectono-stratigraphic study of bivalve coquina-reservoir of Linguado Field allowed to identify two trends of permoporosity development. The delineation of these depositional-diagenetic traps were made through structural and stratigrafic cross-sections and maps. It resulted in the identification of shelf-ramp systems (tilted to SSE), it tickens from 60 to 70 meters and ends against an antithetic fault. The main coquina is bounded by fine siliciclastic units, white clay (low Gamma Ray values) or shale (high Gamma Ray values) lithologies, influencing diagenesis of basal or top coquina limestones (cimented, non-porous). Also in the middle of coquina-reservoir the “clayer” material is also associated with cemented carbonates, with also compartimentalize the reservoir into two subzones. The coquina porosity of the subzones is taken from density-neutron logs, while induction log estimates permeabilities and fluid saturations. It’s noticed the porosity development into pairs, good one followed by a regular/poor one and vice versa. These pairs form verticals succession, pair cycles where porosity improves or decreases upwards. These two scales of pore heterogeneity impose strong layering to the reservoir, and influences fluid saturations, oil-water contacts and porosity cut-offs. In a cross-section with density and induction logs, it can be observed the porosity variation along the shelf-ramp coquina (between 3LI_0004_RJS e 3RJS_0157C_RJ), the porosity is better developed in a downdip direction in the case of the two shelf wells, and also be the three ramp wells. The southern west downdip, 3RJS_0157C_RJ well, has best porosity pairs-cycles; however, its lowest structural conditions favour water saturation. Therefore it is fundamental for reservoir fluid evaluation a cross-plot analysis of RHOB-NPHI and Induction logs

Mapeamento geológico-geontécnico de trecho da estrada vicinal na Serra de Itaqueri, Charqueada (SP)

Geological-geotechnical problems affecting escarps as well as embankment and fill slopes of roads and motorways may generate different types of unsteadiness, which are mainly arisen from the deficient knowledge about the physical environment. This results in unsuitable engineering projects and inadequate executions, which can be worsened by an occasional inappropriate maintenance of the construction. A geologically-geotechnically characterization of escarps and slopes is crucial in order to prevent these problems. This work deals with a geological-geotechnical study of 1:10.000 scale mapping in a stretch of a local road (CHQ-40) at the Serra de Itaqueri, Charqueada town, State of São Paulo. The stretch is known by several physical problems as erosion and mass movement. The methods of study were based on an integrative analysis of the diverse elements of the physical environment by using aerial photographs - to obtain the physiographic compartmentalization of terrain units - as well as field work - to accomplish the evaluation of the units by employing sketch lists. To achieve this, we selected several techniques in order to identify and classify different types of existing problems as erosion, landslide in embankments and fill slopes, rockfall, block rolling, among others. We also included the analysis of soil horizon, thickness and composition. The geological-geotechnical mapping resulted in six units: 1- Sandstones in cuesta’s backhill; 2 – Basalts in cuesta’s front; 3- Sandstones in cuesta’s front; 4 – Talus and colluvial deposits at cuesta’s foothill; 5- Sandstones of the Piramboia Formation in hillside; and 6 – Colluvial soil in the hill top. A characterization of the geological-geotechnical units is detailed, coupled to the cartographic material. Other cartographic products elaborated for this study included 1:10.000 maps of hypsometry, slope and curvature

Modelo petrofísico 3D do Arenito Namorado no Campo de Namorado - Bacia de Campos, RJ

The Namorado Oil Field represents the beginning of the oil exploration in Brazil, in the 70s, and it is still a subject of researches because the importance of this turbidite sandstone in the brazilian oil production. The Namorado’s production level was denominated “Namorado sandstone”, it is composed by turbidite sandstone deposited during the Albian-Cenomanian. In order to define the structural geometry of the main reservoir, geological and geophysical tools like RECON and Geographix (Prizm – Seisvision) softwares were used, and its application was focused on geological facies analysis, for that propose well logs, seismic interpretation and petrophysical calculations were applied. Along this work 15 vertical wells were used and the facies reservoirs were mapped of along the oil field; it is important to mentioned that the all the facies were calibrated by the correlation rock vs log profile, and 12 reservoir-levels (NA-1, NA-2, NA-3, NA-4, NA-5, NA-6, NA-7, NA-8, NA-9, NA-10, NA-11 e NA-12) were recognized and interpreted. Stratigraphic sections (NE-SW and NW-SE) were also built based on stratigraphic well correlation of each interpreted level, and seismic interpretation (pseudo-3D seismic data) on the southeastern portion of the oil field. As results it was interpreted on two- and three-dimensional maps that the deposition reservoir’s levels are hight controlled by normal faults systems. This research also shows attribute maps interpretation and its relationship with the selection of the reservoir attribute represented on it. Finally the data integration of stratigraphic, geophysical and petrophysical calculations lets us the possibility of obtain a detail geological/petrophysical 3D model of the main reservoir levels of “Namorado sandstone” inside the oil/gás field

Evolução tectônica do Trend Badejo-Linguado-Pampo, bacia de Campos (RJ)

The regional geological work for the oil industry, in order to find potential areas for hydrocarbon exploration and understand the geological parameters responsible for the formation of the deposit are known importance. This work fits into that scenario, with regional research with the aid of wells and 2D and 3D seismic sold by DBEP (Database Exploration and Production). Were also used as GeoGraphix software package Landmarks modules Prizm and SeisWork 2D and 3D, and the Surfer 8 and ArcGIS 9.2 with the infrastructure provided by the 05 PRH - ANP with LSGI (Laboratory of Seismic and Geological Interpretation) located at UNESP -- Campus de Rio Claro. The work focuses on study the trend of oil-Badejo-Linguado-Pampo, producing fields since the beginning of offshore holdings. The Campos Basin is now known as the offshore basin of the country more productive, and the high structural Badejo is a structure of great importance in the basin presents itself as largely responsible for the conditioning of hydrocarbon fields Pampo, Linguado and Badejo. Therefore this work also aims to increase knowledge of the region in terms of tectonic and stratigraphic characterize the geometry of the structures associated with this major regional structure. For this we used structural contour maps of the main chrono-horizons, and Isopach maps for the purpose of better understanding the tectono-sedimentary evolution of the Campos Basin locally.