Neutrality tests using DNA polymorphism from multiple samples

The polymorphism of a gene or a locus is studied with increasing frequency by multiple laboratories or the same group at different times. Such practice results in polymorphism being revealed by different samples at different regions of the locus. Tests of neutrality have been widely conducted for polymorphism data but commonly used statistical tests cannot be applied directly to such data. This article provides a procedure to conduct a neutrality test and details are given for two commonly used tests. Applying the two new tests to the chemokine-receptor gene (CCR5) in humans, we found that the hypothesis that all mutations are selectively neutral cannot explain the observed pattern of DNA polymorphism.

Comparative efficiency of trawls made of nylon, polyethylene monofilament and tape twines

Results of comparative fishing operations conducted with three nets of identical design made of nylon, twisted polyethylene monofilament and high density polyethylene (HDPE) tape twines are presented in this communication. Since the tape net recorded the highest prawn and fish catch, monofilament and nylon following in order, it can be recommended to the fishing industry as one of the cheapest and effective fishing materials evolved for trawl fabrication.

Double-rig shrimp trawling, its rigging, comparative efficiency and economics

A radical and revolutionary change from the hitherto employed shrimp trawling is reported for better productivity and economy in deep sea trawling with medium and large vessels. Studies carried out off Veraval with a 13.7 m. four seam shrimp trawl as conventional single-rig and two 6.8 m four seam shrimp trawls as double-rig from a 15.2 m fishing vessel showed an increase of 98% shrimp catch by double-rig over single-rig at 86.3 % of the power utilised by the latter. It has also been worked out, theoretically, how better this available power can be utilised for further improvement of catch. An increase of 15% head rope length in case of double-rig over the optimum single-rig gear of any vessel is recommended.

The effect of increase in the number of fishing trips on the economic efficiency of 9.82 m and 11 m fishing trawlers along Kerala coast

Cost-benefit analysis of a 9.82 m and 11 m fishing trawlers based on the number of fishing trips is presented. The number of fishing trips per year determines the profit and loss of the trawler. With the increase in the number of fishing trips, the profit also increase for both the sizes of trawlers. The minimum quantity of prawn and fish to be landed for 0-20% profit for varying number of fishing trips are worked out. The break-even for 9.82 and 11m trawlers was observed to be 185 and 210 fishing trips respectively during 1980-81.

Studies on the effect of colour of webbing on the efficiency of gill nets for hilsa and pomfret off Veraval

Influence of colour of webbing on the catch of gill nets for commercially important hilsa (Hilsa toli and Hilsa ilisha) and pomfret (Pampus argenteus and Parastromateus niger) has been studied in the coastal waters off Veraval. Among the colours tested yellow and white are recommended for hilsa and pomfret gear. Influence of fishing depth, surface water temperature and turbidity on catch are also discussed.

On the problem of nonadditivity in two-way analysis of variance of data for comparing the efficiency of fishing gears

To bring out the relative efficiency of various types of fishing gears, in the analysis of catch data, a combination of Tukey's test, consequent transformation and graphical analysis for outlier elimination has been introduced, which can be advantageously used for applying ANOVA techniques, Application of these procedures to actual sets of data showed that nonadditivity in the data was caused by either the presence of outliers, or the absence of a suitable transformation or both. As a corollary, the concurrent model: X sub(ij) = µ + α sub(i) + β sub(j) + λ α sub(i) β sub(j) + E sub(ij) adequately fits the data.

On the comparative efficiency of "V" shaped and rectangular flat otter boards for trawling off Veraval, north west coast of India

V shaped all steel boards, with their inherent stability to tide over obstacles and mud, interchangeability of starboard and portside boards are found to be superior to conventional flat rectangular boards for bottom trawling. These are cheaper in construction, offer less resistance and give longer service. Comparative trials with the two types of boards showed significant difference in tension between the boards but not in catch or horizontal opening.

Effect of hanging coefficient on the efficiency of frame net

Comparative fishing experiments with frame nets of 0.4 and 0.5 hanging coefficients were conducted. Results indicate that net with hanging coefficient of 0.4 as more effective for better catch.

Efficiency of two designs of trawls in Hirakud Reservoir

High opening trawl was found to be effective for the exploitation of bottom and off bottom fishes from Hirakud reservoir compared to bulged belly trawl.

Estimating material elasticity by spherical indentation load-relaxation tests on viscoelastic samples of finite thickness

A two-step viscoelastic spherical indentation method is proposed to compensate for 1) material relaxation and 2) sample thickness. In the first step, the indenter is moved at a constant speed and the reaction force is measured. In the second step, the indenter is held at a constant position and the relaxation response of the material is measured. Then the relaxation response is fit with a multi-exponential function which corresponds to a three-branch general Maxwell model. The relaxation modulus is derived by correcting the finite ramp time introduced in the first step. The proposed model takes into account the sample thickness, which is important for applications in which the sample thickness is less than ten times the indenter radius. The model is validated numerically by finite element simulations. Experiments are carried out on a 10% gelatin phantom and a chicken breast sample with the proposed method. The results for both the gelatin phantom and the chicken breast sample agree with the results obtained from a surface wave method. Both the finite element simulations and experimental results show improved elasticity estimations by incorporating the sample thickness into the model. The measured shear elasticities of the 10% gelatin sample are 6.79 and 6.93 kPa by the proposed finite indentation method at sample thickness of 40 and 20 mm, respectively. The elasticity of the same sample is estimated to be 6.53 kPa by the surface wave method. For the chicken breast sample, the shear elasticity is measured to be 4.51 and 5.17 kPa by the proposed indentation method at sample thickness of 40 and 20 mm, respectively. Its elasticity is measured by the surface wave method to be 4.14 kPa. © 2011 IEEE.

Comparative efficiency of different surfaces for drying fish

The efficiency of four different drying surfaces, namely, cement platform, palmyrah leaf mat, aluminum tray and stretched net for drying fish were studied using sciaenids, mullet and perch. All the drying surfaces were found to be equally efficient. The cheaper and locally available palmyrah leaf mat or stretched net can replace costly cement platform and aluminium tray for efficient drying of fish.

Effect of variation in mesh size on trawl efficiency

Result of comparative fishing trials with a bulged belly design with three different mesh ranges in the body and wing to study the effect of mesh size difference on the performance of gear is discussed. While there is no significant difference in catch rate, predictably the 40 mm mesh size trawl fared wen when small sized fish like anchovies formed the major catch. The trawls with 60 and 80 mm mesh size gave better horizontal spread at a lower resistance showing savings in fuel.

Fundamental study on the behavior of milkfish fry for the evaluation of the efficiency of traditional fry collecting gears in the Philippines

The response of Chanos chanos fry to moving and stationary nets of different mesh size and colour, underwater visibility of the nets and water filtration were studied. Results indicate that milkfish fry may be driven by nets of mesh size larger than that presently used; larger mesh size decreases the net resistance in the water so that collectors may move the equipment easily. The large mesh nets should be of a dark colour, preferably black for effective driving; bowever white mosquito net is best for the core end, since the fry are more easily visible on a white background.