Undervisningsmetoder inom läsförståelse i teori och praktik. : Sex lärares uppfattningar och konkreta arbete gällande undervisningen inom läsförståelse i årskurs 1-3.

Resultaten av de internationella undersökningarna PISA 2011 och PIRLS 2011 visar att de svenska elevernas resultat inom läsförståelse försämrats. I Skolinspektionen granskning framkommer det att diskussioner och textsamtal har en relativt liten del av undervisningen av läsförståelse i Sverige idag. Tidigare forskning har ringat in fyra metoder som anses effektivast för elevers utveckling av läsförståelse. Textsamtal, diskussioner och reflektioner har avgörande roller inom alla fyra undervisningsmetoder. Syftet med denna studie är att synliggöra hur sex lärare tänker kring, samt konkret arbetar med, undervisningen av läsförståelse, för att se om de fyra metoderna går att återfinna i de sex lärarnas undervisning. Metoderna som används är semistrukturerade intervjuer samt strukturerade observationer. Resultatet av studien visar att den strategiinriktade undervisningen dominerar undervisningen bland de sex lärarna, och att innehållsorienterad undervisning, vilken visats effektivast i forskningen, är ytterst begränsad. Samtidigt beskriver samtliga lärare att samtal och diskussioner bör vara en stor del av undervisningen inom läsförståelse. En slutsats av studien är att synen på undervisningen av läsförståelse varierar mellan de sex lärarna, samt att allt undervisningsmaterial är baserat på läsförståelsestrategier. Dock förekommer knappt diskussioner och samtal i samband med undervisningen av strategier, vilket är en viktig del för att arbetet med strategiinriktad undervisning ska kunna utveckla elevernas läsförståelse på bästa sätt.

Lärares syfte med laborativt arbete i NOundervisningen i årskurs 1-3 : En kvalitativ intervjustudie om sex lärares syfte med laborativt arbete i NO-undervisningen

Syftet med denna kvalitativa studie var att undersöka lärares syfte med laborativt arbete i årskurs 1-3 i NO-undervisningen samt vilka svårigheter som lärarna beskriver med det laborativa arbetssättet i NO-undervisningen. Studien har genomförts med hjälp av kvalitativa intervjuer av sex lärare som är verksamma i årskurserna 1-3. Alla tre årskurserna finns representerade i studien. De resultat som framkommit i studien är att lärare har flera olika syftet med det laborativa arbetet i NO-undervisningen. De syften som framkom var att öka förståelsen för naturvetenskapliga fenomen hos eleverna, öka elevernas motivation och intresse för naturvetenskap, erbjuda elever att uppleva naturvetenskap med händerna, erbjuda eleverna en möjlighet att träna på läroplanens mål, erbjuda eleverna en undervisning som utgår från varje elevs förutsättningar. Studiens frågeställningar berör även hur de intervjuade lärarna använder sig av laborativt arbete samt vilka svårigheter som lärarna uppger finnas med arbetssättet. Studien visar då att lärarna främst arbetar laborativt utomhus främst med biologi och att den svårigheten som flest lärare påpekade var avsaknaden av material.

Indução de resistência a Fusarium oxysporum f. sp. Tracheiphilum em Caupi: eficiência de indutores abióticos e atividade enzimática elicitada

Foram avaliados os efeitos de indutores abióticos em cultivares de caupi inoculadas com Fusarium oxysporum f. sp. tracheiphilum quanto à severidade, controle da doença e atividade enzimática. Para isso, plantas das cultivares IPA-206 e BR-17 Gurguéia com cinco dias de idade foram pulverizadas com soluções aquosas de ASM (5,0 g do i.a./100 L de água), BABA (1,5 mM) e quitosana (2,0 mg/mL), no primeiro par de folhas e inoculadas, após sete dias da germinação, com 20 mL de uma suspensão de 1 x 10(6) conídios/mL do isolado ISO-PE. A avaliação da severidade da doença foi realizada aos 25 dias após a germinação, através de escala de notas e índice de doença. As atividades das enzimas beta-1,3-glucanase, peroxidase e fenilalanina amônia liase (PAL) foram determinadas em plantas submetidas aos tratamentos anteriores, coletadas aos cinco e 10 dias após a inoculação. Foi observada diferença significativa entre os indutores e a testemunha, nas duas cultivares testadas, aos cinco e 10 dias, destacando-se o indutor ASM, proporcionando um controle da doença de 68,90% e 71,59% nas cultivares BR-17 Gurguéia e IPA-206, respectivamente. O indutor ASM apresentou melhores resultados nas atividades de beta-1,3-glucanase, peroxidase e PAL, destacando-se na cultivar IPA-206 nos dois períodos analisados. Os indutores BABA e quitosana diferiram da testemunha, na atividade de PAL e beta-1,3-glucanase, nessa mesma cultivar, aos cinco dias após a inoculação.

Eficiência e atividade enzimática elicitada por metil jasmonato e silicato de potássio em cana-de-açúcar parasitada por Meloidogyne incognita

O presente estudo teve como objetivo avaliar o efeito de metil jasmonato e silicato de potássio sobre o parasitismo de Meloidogyne incognita na variedade RB863129 de cana-de-açúcar (Saccharum sp.) e a atividade enzimática da peroxidase e β-1,3-glucanase elicitada, em condições de casa de vegetação. Metil jasmonato diminuiu significativamente o número de ovos por grama de raiz, mas não afetou à biomassa da parte aérea da planta. Sete dias após a aplicação, os dois indutores afetaram a atividade de β-glucanase na plantas parasitadas e, aos 14 e 21 dias, promoveram variações significativas nos níveis de peroxidase e β-1,3-glucanase, muito embora, ao contrário da peroxidase, a atividade β-1,3-glucanase não diferiu entre plantas inoculadas e não inoculadas.

Indução de resistência em feijoeiro a mancha angular por extratos de micélio de Pycnoporus sanguineus

O feijoeiro (Phaseolus vulgaris L.) está entre as principais culturas da agricultura nacional e pode ser afetada por várias doenças, como a mancha angular causada por Pseudocercospora griseola. Com o objetivo de desenvolver métodos alternativos ao químico para o controle desta doença, verificou-se o potencial de extratos de micélio de Pycnoporus sanguineus para atividade antimicrobiana in vitro contra P. griseola e para indução de resistência e ativação de enzimas de defesa em feijoeiro, como peroxidase, polifenoloxidase e β-1,3-glucanase, além de sua influência nos teores de proteínas e clorofilas. Os experimentos in vitro e em casa de vegetação foram constituídos pelos extratos de micélio de P. sanguineus e dos controles água, acibenzolar-S-metil (ASM: 75 mg i.a./L) e fungicida azoxystrobin (40 mg i.a./L). In vitro o extrato de micélio apresentou efeito sobre o crescimento micelial, a esporulação e a germinação de esporos de P. griseola. In vivo a severidade foi reduzida em 93% e 50% em casa de vegetação e a campo respectivamente, em relação ao controle água. A atividade das enzimas peroxidase e polifenoloxidase e os teores de proteínas e clorofilas foram maiores nas plantas tratadas com o extrato. Estes resultados indicam a eficiência de P. sanguineus para o controle alternativo da mancha angular do feijoeiro.

Insecticidal and antifungic proteins of the latex from Manihot glaziovii Muell. Arg.

Analysis of the latex from Manihot glaziovii showed the presence of various enzymatic and inhibitory activities. The latex also presented an inhibitory effect on the development of cowpea weevil (Callosobruchus maculatus) in an artificial seed system and on the development, in an in vitro assay, of phytopathogenic fungi Colletotrichum gloesporioides, Fusarium solani and Macrophomina phaseolina. These results suggest the presence of substances, some of them of protein nature, involved in plant defense mechanisms in this exudation product.

Application of Doehlert experimental design in the optimization of experimental variables for the Pseudozyma sp. (CCMB 306) and Pseudozyma sp. (CCMB 300) cell lysis

This study aimed to verify the influence of pH and temperature on the lysis of yeast using experimental design. In this study, the enzymatic extract containing β-1,3-glucanase and chitinase, obtained from the micro-organism Moniliophthora perniciosa, was used. The experiment showed that the best conditions for lysis of Pseudozyma sp. (CCMB 306) and Pseudozyma sp. (CCMB 300) by lytic enzyme were pH 4.9 at 37 ºC and pH 3.9 at 26.7 ºC, respectively. The lytic enzyme may be used for obtaining various biotechnology products from yeast.

Cell wall degrading enzymes and interaction between Trichoderma Aggressivum and Agaricus Bisporus

Agaricus bisporus is the most commonly cultivated mushroom in North America and has a great economic value. Green mould is a serious disease of A. bisporus and causes major reductions in mushroom crop production. The causative agent of green mould disease in North America was identified as Trichoderma aggressivum f. aggressivum. Variations in the disease resistance have been shown in the different commercial mushroom strains. The purpose of this study is to continue investigations of the interactions between T. aggressivum and A. bisporus during the development of green mould disease. The main focus of the research was to study the roles of cell wall degrading enzymes in green mould disease resistance and pathogenesis. First, we tried to isolate and sequence the N-acetylglucosaminidase from A. bisporus to understand the defensive mechanism of mushroom against the disease. However, the lack of genomic and proteomic information of A. bisporus limited our efforts. Next, T. aggressivum cell wall degrading enzymes that are thought to attack Agaricus and mediate the disease development were examined. The three cell wall degrading enzymes genes, encoding endochitinase (ech42), glucanase (fJ-1,3 glucanase) and protease (prb 1), were isolated and sequenced from T. aggressivum f. aggressivum. The sequence data showed significant homology with the corresponding genes from other fungi including Trichoderma species. The transcription levels of the three T. aggressivum cell wall degrading enzymes were studied during the in vitro co-cultivation with A. bisporus using R T -qPCR. The transcription levels of the three genes were significantly upregulated compared to the solitary culture levels but were upregulated to a lesser extent in co-cultivation with a resistant strain of A. bisporus than with a sensitive strain. An Agrobacterium tumefaciens transformation system was developed for T. aggressivum and was used to transform three silencing plasmids to construct three new T. aggressivum phenotypes, each with a silenced cell wall degrading enzyme. The silencing efficiency was determined by RT-qPCR during the individual in vitro cocultivation of each of the new phenotypes with A. bisporus. The results showed that the expression of the three enzymes was significantly decreased during the in vitro cocultivation when compared with the wild type. The phenotypes were co-cultivated with A. bisporus on compost with monitoring the green mould disease progression. The data indicated that prbi and ech42 genes is more important in disease progression than the p- 1,3 glucanase gene. Finally, the present study emphasises the role of the three cell wall degrading enzymes in green mould disease infection and may provide a promising tool for disease management.

Molecular interactions of arbuscular mycorrhizal fungi with mycotoxin-producing fungi and their role in plant defense responses

Les trichothécènes de Fusarium appartiennent au groupe des sesquiterpènes qui sont des inhibiteurs la synthèse des protéines des eucaryotes. Les trichothécènes causent d’une part de sérieux problèmes de santé aux humains et aux animaux qui ont consommé des aliments infectés par le champignon et de l’autre part, elles sont des facteurs importants de la virulence chez plantes. Dans cette étude, nous avons isolé et caractérisé seize isolats de Fusarium de la pomme de terre infectée naturellement dans un champs. Les tests de pathogénicité ont été réalisés pour évaluer la virulence des isolats sur la pomme de terre ainsi que leur capacité à produire des trichothécènes. Nous avons choisi F. sambucinum souche T5 comme un modèle pour cette étude parce qu’il était le plus agressif sur la pomme de terre en serre en induisant un flétrissement rapide, un jaunissement suivi de la mort des plantes. Cette souche produit le 4,15-diacétoxyscirpénol (4,15-DAS) lorsqu’elle est cultivée en milieu liquide. Nous avons amplifié et caractérisé cinq gènes de biosynthèse trichothécènes (TRI5, TRI4, TRI3, TRI11, et TRI101) impliqués dans la production du 4,15-DAS. La comparaison des séquences avec les bases de données a montré 98% et 97% d'identité de séquence avec les gènes de la biosynthèse des trichothécènes chez F. sporotrichioides et Gibberella zeae, respectivement. Nous avons confrenté F. sambucinum avec le champignon mycorhizien à arbuscule Glomus irregulare en culture in vitro. Les racines de carotte et F. sambucinum seul, ont été utilisés comme témoins. Nous avons observé que la croissance de F. sambucinum a été significativement réduite avec la présence de G. irregulare par rapport aux témoins. Nous avons remarqué que l'inhibition de la croissance F. sambucinum a été associée avec des changements morphologiques, qui ont été observés lorsque les hyphes de G. irregulare ont atteint le mycélium de F. sambucinum. Ceci suggère que G. irregulare pourrait produire des composés qui inhibent la croissance de F. sambucinum. Nous avons étudié les patrons d’expression des gènes de biosynthèse de trichothécènes de F. sambucinum en présence ou non de G. irregulare, en utilisant le PCR en temps-réel. Nous avons observé que TRI5 et TRI6 étaient sur-exprimés, tandis que TRI4, TRI13 et TRI101 étaient en sous-exprimés en présence de G. irregulare. Des analyses par chromatographie en phase-gazeuse (GC-MS) montrent clairement que la présence de G. irregulare réduit significativement la production des trichothécènes par F. sambucinum. Le dosage du 4,15-DAS a été réduit à 39 μg/ml milieu GYEP par G. irregulare, comparativement à 144 μg/ml milieu GYEP quand F. sambucinum est cultivé sans G. irregulare. Nous avons testé la capacité de G. irregulare à induire la défense des plants de pomme de terre contre l'infection de F. sambucinum. Des essais en chambre de croissance montrent que G. irregulare réduit significativement l’incidence de la maladie causée par F. sambucinum. Nous avons aussi observé que G. irregulare augmente la biomasse des racines, des feuilles et des tubercules. En utilisant le PCR en temps-réel, nous avons étudié les niveaux d’expression des gènes impliqué dans la défense des plants de pommes de terre tels que : chitinase class II (ChtA3), 1,3-β-glucanase (Glub), peroxidase (CEVI16), osmotin-like protéin (OSM-8e) et pathogenèses-related protein (PR-1). Nous avons observé que G. irregulare a induit une sur-expression de tous ces gènes dans les racines après 72 heures de l'infection avec F. sambucinum. Nous avons également trové que la baisse provoquée par F. sambucinum des gènes Glub et CEVI16 dans les feuilles pourrait etre bloquée par le traitement AMF. Ceci montre que l’inoculation avec G. irregulare constitut un bio-inducteur systémique même dans les parties non infectées par F. sambucinum. En conclusion, cette étude apporte de nouvelles connaissances importantes sur les interactions entre les plants et les microbes, d’une part sur les effets directs des champignons mycorhiziens sur l’inhibition de la croissance et la diminution de la production des mycotoxines chez Fusarium et d’autre part, l’atténuation de la sévérité de la maladie dans des plantes par stimulation leur défense. Les données présentées ouvrent de nouvelles perspectives de bio-contrôle contre les pathogènes mycotoxinogènes des plantes.

Proteases from an Environmental Isolate of Pseudomonas Aeruginosa MCCB 123 and Their Applications

In the present study,heterotrophic protease producing bacterial isolates were screened for protease activity and a potent protease producing bacterial isolate was selected,identified and coded as Pseudomonas aeruginosa MCCB 123.The organism was capable of producing three different types of enzymes each having potential industrial applications.The non-toxic nature of the bacterial strain and the relatively non-toxic nature of three enzymes suggested their poetential application in various industries.Application of LasA protease and beta-1,3 glucanase in DNA extraction is a promising area for commercial utilization. LasB protease can find its potential application in detergent and tanning industries.As on today Bacillus sp.has been the source of commercial proteases,and the ones produced form P.aeruginosa 123 can pave way for making the industrial and biomedical processes more cost effective and refined.

Transcriptome analysis for discovering candidate genes involve in embryogenesis in coconut (Cocos nucifera L.) through 454 pyrosequencing

Coconut, Cocos nucifera L. is a major plantation crop, which ensures income for millions of people in the tropical region. Detailed molecular studies on zygotic embryo development would provide valuable clues for the identification of molecular markers to improve somatic embryogenesis. Since there is no ongoing genome project for this species, coconut expressed sequence tags (EST) would be an interesting technique to identify important coconut embryo specific genes as well as other functional genes in different biochemical pathways. The goal of this study was to analyse the ESTs by examining the transcriptome data of the different embryo tissue types together with one somatic tissue. Here, four cDNA libraries from immature embryo, mature embryo, microspore derived embryo and mature leaves were constructed. cDNA was sequenced by the Roche-454 GS-FLX system and assembled into 32621 putative unigenes and 155017 singletons. Of these unigenes, 18651 had significant sequence similarities to non-redundant protein database, from which 16153 were assigned to one or more gene ontology categories. Homologue genes, which are responsible for embryo development such as chitinase, beta-1,3-glucanase, ATP synthase CF0 subunit, thaumatin-like protein and metallothionein-like protein were identified among the embryo EST collection. Of the unigenes, 6694 were mapped into 139 KEGG pathways including carbohydrate metabolism, energy metabolism, lipid metabolism, amino acid metabolism and nucleotide metabolism. This collection of 454-derived EST data generated from different tissue types provides a significant resource for genome wide studies and gene discovery of coconut, a non-model species.

Efeito de produtos químicos sobre a mancha bacteriana (xanthomonas perforans) e na ativação de proteínas relacionadas à patogênese em tomateiro

The present study aims to evaluate the effect of fungicides and antibiotics to control bacterial spot (Xanthomonas perforans) in tomato, and the activation of pathogenesis-related proteins. Hybrid tomato AP 529 was used to assess the severity of disease. The treatments consisted of spraying with acibenzolar-S-methyl, fluazinam, pyraclostrobin, pyraclostrobin + methiran, copper oxychloride, copper oxychloride and mancozeb + oxytetracycline, and inoculated and non-inoculated controls. After three days of treatment, all plants were inoculated with X. perforans (10 6 CFU / mL). Leaf discs were collected for assessment of peroxidase, polyphenol oxidase, β-1,3 glucanase, phenylalanine ammonia lyase and protease. The area under the disease progress curve (AUDPC) was calculated with the data of severity. All treatments had reduced AUDPC compared to the inoculated control. Fungicides acibenzolar-S-methyl, pyraclostrobin, and pyraclostrobin + methiran had more satisfactory results in reducing the severity of bacterial spot on tomato. The products based on pyraclostrobin together with acibenzolar-S-methyl induced enzymatic activities of peroxidase, polyphenoloxidase and β-1,3 glucanase, indicating that these products may be related to the induction of resistance to bacterial spot on tomato plants.

Ativação das vias relacionadas a resistência de Citrus sinensis em resposta a interação com a bactéria Xanthomonas axonopodis

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)

Fungos sapróbios do semiárido nordestino: aspectos fisiológicos, ação no controle da ferrugem e indução de enraizamento em mudas de eucalipto

Pós-graduação em Ciência Florestal - FCA

Produção de beta-glucanases por Trichoderma harzianum Rifai para obtenção gluco-oligossacarídeos a partir de botriosferana

Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)