LiDAR remote sensing applied to forest resources assessment

Disponer de información precisa y actualizada de inventario forestal es una pieza clave para mejorar la gestión forestal sostenible y para proponer y evaluar políticas de conservación de bosques que permitan la reducción de emisiones de carbono debidas a la deforestación y degradación forestal (REDD). En este sentido, la tecnología LiDAR ha demostrado ser una herramienta perfecta para caracterizar y estimar de forma continua y en áreas extensas la estructura del bosque y las principales variables de inventario forestal. Variables como la biomasa, el número de pies, el volumen de madera, la altura dominante, el diámetro o la altura media son estimadas con una calidad comparable a los inventarios tradicionales de campo. La presente tesis se centra en analizar la aplicación de los denominados métodos de masa de inventario forestal con datos LIDAR bajo diferentes condiciones y características de masa forestal (bosque templados puros y mixtos) y utilizando diferentes bases de datos LiDAR (información proveniente de vuelo nacionales e información capturada de forma específica). Como consecuencia de lo anterior, se profundiza en la generación de inventarios forestales continuos con LiDAR en grandes áreas. Los métodos de masa se basan en la búsqueda de relaciones estadísticas entre variables predictoras derivadas de la nube de puntos LiDAR y las variables de inventario forestal medidas en campo con el objeto de generar una cartografía continua de inventario forestal. El rápido desarrollo de esta tecnología en los últimos años ha llevado a muchos países a implantar programas nacionales de captura de información LiDAR aerotransportada. Estos vuelos nacionales no están pensados ni diseñados para fines forestales por lo que es necesaria la evaluación de la validez de esta información LiDAR para la descripción de la estructura del bosque y la medición de variables forestales. Esta información podría suponer una drástica reducción de costes en la generación de información continua de alta resolución de inventario forestal. En el capítulo 2 se evalúa la estimación de variables forestales a partir de la información LiDAR capturada en el marco del Plan Nacional de Ortofotografía Aérea (PNOA-LiDAR) en España. Para ello se compara un vuelo específico diseñado para inventario forestal con la información de la misma zona capturada dentro del PNOA-LiDAR. El caso de estudio muestra cómo el ángulo de escaneo, la pendiente y orientación del terreno afectan de forma estadísticamente significativa, aunque con pequeñas diferencias, a la estimación de biomasa y variables de estructura forestal derivadas del LiDAR. La cobertura de copas resultó más afectada por estos factores que los percentiles de alturas. Considerando toda la zona de estudio, la estimación de la biomasa con ambas bases de datos no presentó diferencias estadísticamente significativas. Las simulaciones realizadas muestran que las diferencias medias en la estimación de biomasa entre un vuelo específico y el vuelo nacional podrán superar el 4% en áreas abruptas, con ángulos de escaneo altos y cuando la pendiente de la ladera no esté orientada hacia la línea de escaneo. En el capítulo 3 se desarrolla un estudio en masas mixtas y puras de pino silvestre y haya, con un enfoque multi-fuente empleando toda la información disponible (vuelos LiDAR nacionales de baja densidad de puntos, imágenes satelitales Landsat y parcelas permanentes del inventario forestal nacional español). Se concluye que este enfoque multi-fuente es adecuado para realizar inventarios forestales continuos de alta resolución en grandes superficies. Los errores obtenidos en la fase de ajuste y de validación de los modelos de área basimétrica y volumen son similares a los registrados por otros autores (usando un vuelo específico y parcelas de campo específicas). Se observan errores mayores en la variable número de pies que los encontrados en la literatura, que pueden ser explicados por la influencia de la metodología de parcelas de radio variable en esta variable. En los capítulos 4 y 5 se evalúan los métodos de masa para estimar biomasa y densidad de carbono en bosques tropicales. Para ello se trabaja con datos del Parque Nacional Volcán Poás (Costa Rica) en dos situaciones diferentes: i) se dispone de una cobertura completa LiDAR del área de estudio (capitulo 4) y ii) la cobertura LiDAR completa no es técnica o económicamente posible y se combina una cobertura incompleta de LiDAR con imágenes Landsat e información auxiliar para la estimación de biomasa y carbono (capitulo 5). En el capítulo 4 se valida un modelo LiDAR general de estimación de biomasa aérea en bosques tropicales y se compara con los resultados obtenidos con un modelo ajustado de forma específica para el área de estudio. Ambos modelos están basados en la variable altura media de copas (TCH por sus siglas en inglés) derivada del modelo digital LiDAR de altura de la vegetación. Los resultados en el área de estudio muestran que el modelo general es una alternativa fiable al ajuste de modelos específicos y que la biomasa aérea puede ser estimada en una nueva zona midiendo en campo únicamente la variable área basimétrica (BA). Para mejorar la aplicación de esta metodología es necesario definir en futuros trabajos procedimientos adecuados de medición de la variable área basimétrica en campo (localización, tamaño y forma de las parcelas de campo). La relación entre la altura media de copas del LiDAR y el área basimétrica (Coeficiente de Stock) obtenida en el área de estudio varía localmente. Por tanto es necesario contar con más información de campo para caracterizar la variabilidad del Coeficiente de Stock entre zonas de vida y si estrategias como la estratificación pueden reducir los errores en la estimación de biomasa y carbono en bosques tropicales. En el capítulo 5 se concluye que la combinación de una muestra sistemática de información LiDAR con una cobertura completa de imagen satelital de moderada resolución (e información auxiliar) es una alternativa efectiva para la realización de inventarios continuos en bosques tropicales. Esta metodología permite estimar altura de la vegetación, biomasa y carbono en grandes zonas donde la captura de una cobertura completa de LiDAR y la realización de un gran volumen de trabajo de campo es económica o/y técnicamente inviable. Las alternativas examinadas para la predicción de biomasa a partir de imágenes Landsat muestran una ligera disminución del coeficiente de determinación y un pequeño aumento del RMSE cuando la cobertura de LiDAR es reducida de forma considerable. Los resultados indican que la altura de la vegetación, la biomasa y la densidad de carbono pueden ser estimadas en bosques tropicales de forma adecuada usando coberturas de LIDAR bajas (entre el 5% y el 20% del área de estudio). ABSTRACT The availability of accurate and updated forest data is essential for improving sustainable forest management, promoting forest conservation policies and reducing carbon emissions from deforestation and forest degradation (REDD). In this sense, LiDAR technology proves to be a clear-cut tool for characterizing forest structure in large areas and assessing main forest-stand variables. Forest variables such as biomass, stem volume, basal area, mean diameter, mean height, dominant height, and stem number can be thus predicted with better or comparable quality than with costly traditional field inventories. In this thesis, it is analysed the potential of LiDAR technology for the estimation of plot-level forest variables under a range of conditions (conifer & broadleaf temperate forests and tropical forests) and different LiDAR capture characteristics (nationwide LiDAR information vs. specific forest LiDAR data). This study evaluates the application of LiDAR-based plot-level methods in large areas. These methods are based on statistical relationships between predictor variables (derived from airborne data) and field-measured variables to generate wall to wall forest inventories. The fast development of this technology in recent years has led to an increasing availability of national LiDAR datasets, usually developed for multiple purposes throughout an expanding number of countries and regions. The evaluation of the validity of nationwide LiDAR databases (not designed specifically for forest purposes) is needed and presents a great opportunity for substantially reducing the costs of forest inventories. In chapter 2, the suitability of Spanish nationwide LiDAR flight (PNOA) to estimate forest variables is analyzed and compared to a specifically forest designed LiDAR flight. This study case shows that scan angle, terrain slope and aspect significantly affect the assessment of most of the LiDAR-derived forest variables and biomass estimation. Especially, the estimation of canopy cover is more affected than height percentiles. Considering the entire study area, biomass estimations from both databases do not show significant differences. Simulations show that differences in biomass could be larger (more than 4%) only in particular situations, such as steep areas when the slopes are non-oriented towards the scan lines and the scan angles are larger than 15º. In chapter 3, a multi-source approach is developed, integrating available databases such as nationwide LiDAR flights, Landsat imagery and permanent field plots from SNFI, with good resultos in the generation of wall to wall forest inventories. Volume and basal area errors are similar to those obtained by other authors (using specific LiDAR flights and field plots) for the same species. Errors in the estimation of stem number are larger than literature values as a consequence of the great influence that variable-radius plots, as used in SNFI, have on this variable. In chapters 4 and 5 wall to wall plot-level methodologies to estimate aboveground biomass and carbon density in tropical forest are evaluated. The study area is located in the Poas Volcano National Park (Costa Rica) and two different situations are analyzed: i) available complete LiDAR coverage (chapter 4) and ii) a complete LiDAR coverage is not available and wall to wall estimation is carried out combining LiDAR, Landsat and ancillary data (chapter 5). In chapter 4, a general aboveground biomass plot-level LiDAR model for tropical forest (Asner & Mascaro, 2014) is validated and a specific model for the study area is fitted. Both LiDAR plot-level models are based on the top-of-canopy height (TCH) variable that is derived from the LiDAR digital canopy model. Results show that the pantropical plot-level LiDAR methodology is a reliable alternative to the development of specific models for tropical forests and thus, aboveground biomass in a new study area could be estimated by only measuring basal area (BA). Applying this methodology, the definition of precise BA field measurement procedures (e.g. location, size and shape of the field plots) is decisive to achieve reliable results in future studies. The relation between BA and TCH (Stocking Coefficient) obtained in our study area in Costa Rica varied locally. Therefore, more field work is needed for assessing Stocking Coefficient variations between different life zones and the influence of the stratification of the study areas in tropical forests on the reduction of uncertainty. In chapter 5, the combination of systematic LiDAR information sampling and full coverage Landsat imagery (and ancillary data) prove to be an effective alternative for forest inventories in tropical areas. This methodology allows estimating wall to wall vegetation height, biomass and carbon density in large areas where full LiDAR coverage and traditional field work are technically and/or economically unfeasible. Carbon density prediction using Landsat imaginery shows a slight decrease in the determination coefficient and an increase in RMSE when harshly decreasing LiDAR coverage area. Results indicate that feasible estimates of vegetation height, biomass and carbon density can be accomplished using low LiDAR coverage areas (between 5% and 20% of the total area) in tropical locations.

Accurate Analysis of Subharmonic Oscillations of V^2 and V^2Ic Controls Applied to Buck Converter

V2Ic control provides very fast dynamic performance to the Buck converter both under load steps and under voltage reference steps. However, the design of this control is complex since it is prone to subharmonic oscillations and several parameters affect the stability of the system. This paper derives and validates a very accurate modeling and stability analysis of a closed-loop V2Ic control using the Floquet theory. This allows the derivation of sensitivity analysis to design a robust converter. The proposed methodology is validated on a 5-MHz Buck converter. The work is also extended to V2 control using the same methodology, showing high accuracy and robustness. The paper also demonstrates, on the V2 control, that even a low bandwidth-linear controller can affect the stability of a ripple-based control.

Systematic Process for Building a Fault Diagnoser Based on Petri Nets Applied to a Helicopter

This work presents a systematic process for building a Fault Diagnoser (FD), based on Petri Nets (PNs) which has been applied to a small helicopter. This novel tool is able to detect both intermittent and permanent faults. The work carried out is discussed from theoretical and practical point of view. The procedure begins with a division of the whole system into subsystems, which are the devices that have to be modeled by using PN, considering both the normal and fault operations. Subsequently, the models are integrated into a global Petri Net diagnoser (PND) that is able to monitor a whole helicopter and show critical variables to the operator in order to determine the UAV health, preventing accidents in this manner. A Data Acquisition System (DAQ) has been designed for collecting data during the flights and feeding PN diagnoser with them. Several real flights (nominal or under failure) have been carried out to perform the diagnoser setup and verify its performance. A summary of the validation results obtained during real flight tests is also included. An extensive use of this tool will improve preventive maintenance protocols for UAVs (especially helicopters) and allow establishing recommendations in regulations

System theory based hazard analysis applied to the process industry

Chemical process accidents still occur and cost billions of dollars and, what is worse, many human lives. That means that traditional hazard analysis techniques are not enough mainly owing to the increase of complexity and size of chemical plants. In the last years, a new hazard analysis technique has been developed, changing the focus from reliability to system theory and showing promising results in other industries such as aeronautical and nuclear. In this paper, we present an approach for the application of STAMP and STPA analysis developed by Leveson in 2011 to the process industry.

Multicriteria decision analysis applied to cover crop species andcultivars selection

Cover crop selection should be oriented to the achievement of specific agrosystem benefits. The covercrop, catch crop, green manure and fodder uses were identified as possible targets for selection. Theobjective was to apply multi-criteria decision analysis to evaluate different species (Hordeum vulgareL., Secale cereale L., ×Triticosecale Whim, Sinapis alba L., Vicia sativa L.) and cultivars according to theirsuitability to be used as cover crops in each of the uses. A field trial with 20 cultivars of the five specieswas conducted in Central Spain during two seasons (October?April). Measurements of ground cover, cropbiomass, N uptake, N derived from the atmosphere, C/N, dietary fiber content and residue quality werecollected. Aggregation of these variables through utility functions allowed ranking species and cultivarsfor each usage. Grasses were the most suitable for the cover crop, catch crop and fodder uses, while thevetches were the best as green manures. The mustard attained high ranks as cover and catch crop the firstseason, but the second decayed due to low performance in cold winters. Mustard and vetches obtainedworse rankings than grasses as fodder. Hispanic was the most suitable barley cultivar as cover and catchcrop, and Albacete as fodder. The triticale Titania attained the highest rank as cover and catch crop andfodder. Vetches Aitana and BGE014897 showed good aptitudes as green manures and catch crops. Thisanalysis allowed comparison among species and cultivars and might provide relevant information forcover crops selection and management.

Molecular dynamics and free-energy calculations applied to affinity maturation in antibody 48G7

We investigated the relative free energies of hapten binding to the germ line and mature forms of the 48G7 antibody Fab fragments by applying a continuum model to structures sampled from molecular dynamics simulations in explicit solvent. Reasonable absolute and very good relative free energies were obtained. As a result of nine somatic mutations that do not contact the hapten, the affinity-matured antibody binds the hapten >104 tighter than the germ line antibody. Energetic analysis reveals that van der Waals interactions and nonpolar contributions to solvation are similar and drive the formations of both the germ line and mature antibody–hapten complexes. Affinity maturation of the 48G7 antibody therefore appears to occur through reorganization of the combining site geometry in a manner that optimizes the balance of gaining favorable electrostatic interactions with the hapten and losing those with solvent during the binding process. As reflected by lower rms fluctuations in the antibody–hapten complex, the mature complex undergoes more restricted fluctuations than the germ line complex. The dramatically increased affinity of the 48G7 antibody over its germ line precursor is thus made possible by electrostatic optimization.

NOMAD: a versatile strategy for in vitro DNA manipulation applied to promoter analysis and vector design.

Molecular analysis of complex modular structures, such as promoter regions or multi-domain proteins, often requires the creation of families of experimental DNA constructs having altered composition, order, or spacing of individual modules. Generally, creation of every individual construct of such a family uses a specific combination of restriction sites. However, convenient sites are not always available and the alternatives, such as chemical resynthesis of the experimental constructs or engineering of different restriction sites onto the ends of DNA fragments, are costly and time consuming. A general cloning strategy (nucleic acid ordered assembly with directionality, NOMAD; WWW resource locator http:@Lmb1.bios.uic.edu/NOMAD/NOMAD.htm l) is proposed that overcomes these limitations. Use of NOMAD ensures that the production of experimental constructs is no longer the rate-limiting step in applications that require combinatorial rearrangement of DNA fragments. NOMAD manipulates DNA fragments in the form of "modules" having a standardized cohesive end structure. Specially designed "assembly vectors" allow for sequential and directional insertion of any number of modules in an arbitrary predetermined order, using the ability of type IIS restriction enzymes to cut DNA outside of their recognition sequences. Studies of regulatory regions in DNA, such as promoters, replication origins, and RNA processing signals, construction of chimeric proteins, and creation of new cloning vehicles, are among the applications that will benefit from using NOMAD.

Avaliação de diversos métodos de detecção de cistos de Giardia spp. e Oocistos de Cryptosporidium parvum presentes no resíduo gerado após o tratamento de água de abastecimento com turbidez elevada

Este trabalho teve como objetivo avaliar diversos métodos de detecção e recuperação de cistos de Giardia spp. e de oocistos de Cryptosporidium parvum em resíduos gerados no tratamento de águas de abastecimento com turbidez elevada tendo como padrão o Método 1623.1 da USEPA (2012 ). Para tanto, ensaios utilizando aparelho Jarteste (coagulação, floculação, decantação e filtração ) foram realizados utilizando o coagulante cloreto de polialumínio - PAC. Em todos os métodos avaliados foi utilizada a técnica de purificação por separação imunomagnética - IMS. A adaptação do método floculação em carbonato de cálcio FCCa elaborado por Vesey et al. (1993) e adaptado por Feng et al. (2011), repercutiu nos melhores resultados para a amostra de resíduo sedimentado, com recuperações de 68 ± 17 % para oocisto de C. parvum e de 42 ± 7 % para cisto de Giardia spp. Entretanto, as recuperações para a amostra de água de lavagem dos filtros - ALF foram inferiores à 1 %, não sendo possível determinar um método adequado. A presença dos patógenos indica que o reuso da ALF em ETA convencionais ou o descarte em mananciais sem um tratamento prévio, pode representar problemas de contaminação. A adaptação dos métodos de Boni de Oliveira (2012) e Keegan et al. (2008), também repercutiram em porcentagens de recuperação expressivas para a amostra de resíduo sedimentado, sendo de: 41 ± 35 % para oocisto de C. parvum e 11 ± 70 % para cisto de Giardia spp., e 38 ± 26 % para oocisto de C. parvum e 26 ± 13 % para cisto de Giardia spp., respectivamente. A análise estatística não resultou em diferença significativa entre estes dois métodos, entretanto, as elevadas recuperações indicam que estes métodos podem ser melhor avaliados em pesquisas futuras.

Monetary Effervescence: A Sociological Theory of Religion Applied to Money

This project attempts to answer the question "What holds the construction of money together?" by asserting that it is money's religious nature which provides the moral compulsion for people to use, and continue to uphold, money as a socially constructed concept. This project is primarily descriptive and focuses on the religious nature of money by employing a sociological theory of religion in viewing money as a technical concept. This is an interdisciplinary work between religious studies, economics, and sociology and draws heavily from Emile Durkheim's 'The Elementary Forms of Religious Life' as well as work related to heterodox theories of money developed by Geoffrey Ingham, A. Mitchell Innes, and David Graeber. Two new concepts are developed: the idea of monetary sacrality and monetary effervescence, both of which serve to recharge the religious saliency of money. By developing the concept of monetary sacrality, this project shows how money acts to interpret our economic relations while also obfuscating complex power dynamics in society, making them seem naturally occurring and unchangeable. The project also shows how our contemporary fractional reserve banking system contributes to money's collective effervescence and serves to animate economic acting within a monetary network. The project concludes by outlining multiple implications for religious studies, economics, sociology, and central banking.

A knowledge-based textual entailment approach applied to the QA answer validation at CLEF 2006

The Answer Validation Exercise (AVE) is a pilot track within the Cross-Language Evaluation Forum (CLEF) 2006. The AVE competition provides an evaluation frame- work for answer validations in Question Answering (QA). In our participation in AVE, we propose a system that has been initially used for other task as Recognising Textual Entailment (RTE). The aim of our participation is to evaluate the improvement our system brings to QA. Moreover, due to the fact that these two task (AVE and RTE) have the same main idea, which is to find semantic implications between two fragments of text, our system has been able to be directly applied to the AVE competition. Our system is based on the representation of the texts by means of logic forms and the computation of semantic comparison between them. This comparison is carried out using two different approaches. The first one managed by a deeper study of the Word- Net relations, and the second uses the measure defined by Lin in order to compute the semantic similarity between the logic form predicates. Moreover, we have also designed a voting strategy between our system and the MLEnt system, also presented by the University of Alicante, with the aim of obtaining a joint execution of the two systems developed at the University of Alicante. Although the results obtained have not been very high, we consider that they are quite promising and this supports the fact that there is still a lot of work on researching in any kind of textual entailment.

High-speed video-oculography applied to assess pupil light reflex

Póster presentado en el VII European/ I World Meeting in Visual and Physiological Optics