A check list of opisthobranch snails of the Karachi coast

The check list deals with 44 species of opisthobranchs belonging to Cephalaspidea (12 species), Anaspidea (4 species), Sacoglossa (4 species), Notaspidea, (2 species) and Nudibranchia (21 species), collected from Pakistan coast of northern Arabian Sea.

Occurrence and abundance of brachyuran larvae in the Manora Channel (Karachi, Pakistan) during 1993

The present paper investigates the occurrence and abundance of brachyuran larvae in the Manora Channel during August- December 1993. The fortnightly planktonic sampling was carried out in Manora Channel which is bordered by mangroves, during day time from surface and subsurface waters at shallow depth using Bongo net of 300 micron mesh size. Analysis of samples revealed presence of brachyuran larvae of 12 species belonging to 6 families. Of these 4 species are confirmed: Serenella indica, Dotilla blanfordi, Metopograpsus thukuhar and Clistocoeloma lanatum, 2 provisionally identified species are: Pilumnus ?karachiensis and Pinnotheres ?pisum, 2 species are identified upto generic level: Philyra sp. and Pinnotheres sp., and 1 Ocypodid species and 3 Xanthid species are identified upto family level. This study based on identification, occurrence and abundance of brachyuran larvae in the area, also gives percentage composition of brachyuran larvae collected during 1993, in the Manora Channel.

Food and feeding habit of chapila (Gudusia chapra)

Abundance of diatom (Bacillariophyceae) in the plankton population and the dietary role of it in chapila (Gudusia chapra) in pond were studied. A total of 25 genera of phytoplankton belonging to Bacillariophyceae (7), Chlorophyceae (11), Cyanophyceae (5) and Euglenophyceae (2) and 9 genera of zooplankton belonging to Crustacea (3) and Rotifera (6) were recorded from the water. Among the phytoplankton, highest abundance of Chlorophyceae was observed, and Bacillariophyceae, Cyanophyceae and Euglenophyceae ranked the second, third and fourth position in the planktonic population, respectively. Among the zooplankton, Rotifera was recorded as the most dominant group and Crustacea as the least one. From the gut content analysis, 4 groups of phytoplankton consisting of 33 genera of plankton were identified and recoded [sic] of which 25 belonging to phytoplankton and 8 belonging to zooplankton. This study reveals that the Chlorophyceae and Cyanophyceae were the most dominant food items of chapila. Bacillariophyceae (diatom) and Euglenophyceae were less important and Crustacea and Rotifera were the least important in the diet of Chapila. The present investigation showed that chapila appeared to be a plankton feeder with a preference for phytoplankton to zooplankton. Electivity analysis showed that the fish avoided zooplankton and strongly selected phytoplankton. In the gut contents of fish, Chlorophyceae was positively and Bacillariophyceae (diatom) was negatively selected throughout the experimental period, in the pond water.

A new record of Excirolana Orientalis (Dana, 1853), a cirolanid genus and species (Isopoda, Flabellifera) from the Pakistan coast

Excirolana orienta/is (Dana, 1853) belonging to the Cirolanidae, hitherto unknown from Pakistan, is collected from the rocky intertidal region of Manora Island, Karachi coast The specimens are fully described and illustrated. A list of the known species of the genus Excirolana is also provided since the genus is also first time reported from here.

The first antimicrobial peptide from sea amphibian

The crab-eating frog, Rana cancrivora, is one of only a handful of amphibians worldwide that tolerates saline waters. It typically inhabits brackish water of mangrove forests of Southeast Asia. A large amount of antimicrobial peptides belonging to different families have been identified from skins of amphibians inhabiting freshwater. No antimicrobial peptide from sea amphibians has been reported. In this paper, we firstly reported the antimicrobial peptide and its cDNA cloning from skin secretions of the crab-eating frog R. cancrivora. The antimicrobial peptide was named cancrin with an amino acid sequence of GSAQPYKQLHKVVNWDPYG. By BLAST search, cancrin had no significant similarity to any known peptides. The cDNA encoding cancrin was cloned from the cDNA library of the skin of R. cancrivora. The cancrin precursor is composed of 68 amino acid residues including a signal peptide, acidic spacer peptide, which are similar to other antimicrobial peptide precursors from Ranid amphibians and mature cancrin. The overall structure is similar to other amphibian antimicrobial peptide precursors although mature cancrin is different from known peptides. The current results reported a new family of amphibian antimicrobial peptide and the first antimicrobial peptide from sea amphibian. (c) 2007 Elsevier Ltd. All rights reserved.

Five novel antimicrobial peptides from skin secretions of the frog, Amolops loloensis

While investigating antimicrobial peptide diversity of Amolops loloensis, five novel antimicrobial peptides belonging to two families were identified from skin secretions of this frog. The first family including two members is esculentin-2-AL (esculentin-2-ALa and -ALb): the second family including three members is temporin-AL (temporin-ALd to -ALf). The family of esculentin-2-AL is composed of 37 amino acid residues (aa); the family of temporin-AL is composed of 16, 13 and 10 aa, respectively. All of these antimicrobial peptides showed antimicrobial activities against tested microorganisms. cDNAs encoding precursors of esculentin-2-ALs and temporin-ALs were cloned from the skin cDNA library of A. loloensis. All the precursors share similar overall structures. There is a typical prohormone processing signal (Lys-Arg) located between the acidic propiece and the mature peptide. The antimicrobial peptide family of esculentin-2 is firstly reported in the genus of Amolops. Combined with previous reports, a total of four antimicrobial peptide families have been identified from the genus of Amolops; three of them are also found in the genus of Rana. These results suggest the possible evolutionary connection between the genera Amolops and Rana. (C) 2009 Elsevier Inc. All rights reserved.

Notes on the fish resources of the Bahuda estuary, Orissa, India

Estuaries form an important site for the zoologist as these are the places known to be very rich in food and nutrients and so, become nesting-cum-breeding grounds for many species and also, own good species diversity. Bahuda estuary of Orissa is located at the inter-state border of Orissa and Andhra Pradesh. Explored for many invertebrates, this estuary was not properly investigated for its rich fish fauna. Various surveys at Bahuda estuary revealed that it is an important site of study for the faunal diversity of fishes in the east coast. Forty-eight species belonging to 33 genera under eight orders and 22 families were examined referring standard literature· and methods. Most of the groups of fishes encountered are of commercial importance.

Study of fish diversity in Nira River

Fish diversity in Nira River in Pune District has been studied. The study revealed the presence of 24 species of fish belonging to eight orders (Cypriniformes, Siluriformes, Perciformes, Osteoglossiformes, Synbranchiformes, Clupeiformes, Mugiliformes and Aulopiformes). The predominant orders of fishes in this area (Sangavi) are Cypriniformes, Siluriformes and Perciformes. The highest number of ten species was recorded in the order Cypriniformes. The fishes recorded were found to be widely distributed and were present in good numbers in the river.

Studies on water quality and fish diversity of Sadatpur lake in Ahmednagar district Maharashtra

The present study deals with the water quality and ichthyofauna of Sadatpur lake. Monthly changes in water quality parameters such as temperature, pH, dissolved oxygen (DO), total alkalinity, chlorides, sulphates, phosphates and nitrites have been studied for a period of one year beginning from January 2005 and were investigated to assess the suitability of this lake for fish and fisheries practices. All the physico-chemical parameters determined, revealed that the fluctuations in water temperature, pH, dissolved oxygen, alkalinity and nitrites, were within the desirable limits. On the other hand, chloride and sulphate were lower whereas phosphate was higher than the desirable limits. Altogether 24 fish species belonging to 17 genera and 2 orders were found to be present in the lake. Among fish species family Cyprinidae dominated the lake. The lake subsistence fishery served the need of local fishermen community.

Studies on the chemical control of psychrophilic bacterial spoilage of fish. 2 - The effect of antibiotics on the growth of psycrophilic bacteria isolated from marine fish

Among the various antibiotics tried, tetracyclines particularly chlorotetracycline (CTC), chloramphenicol and chlorostrep were found to be fairly effective at 8 and 10 p.p.m. levels. The order of sensitivity to CTC among the six genera studied was found to be Achromobacterbelonging to Achromobacter, Flavobacterium and Pseudomonas were generally more resistant to antibiotics than species belonging to other genera. Among the resistant organisms, Achromobacter superficialis was found to be most resistant and only CTC at 10 p.p.m. level could partially inhibit this culture. The useful combinations of antibiotics for commercial application are discussed.

Preservation of cotton fish net twines by tanning 2. Fixation of tannin

Fixative behaviour of tannin belonging to three functional groups was stud1ed m deta1l using copper sulphate and potassium dichromate as oxidising agents.

Mitochondrial DNA sequence polymorphisms of five ethnic populations from northern China

To study the mitochondrial DNA (mtDNA) polymorphisms in a total of 232 individuals from five ethnic populations (Daur, n=45; Ewenki, n=47; Korean, n=48; Mongolian, n=48; Oroqen, n=44) in northern China, we analyzed the control region sequences and typed for a number of characteristic mutations in coding regions (especially the region 14576-16047), by direct sequencing or restriction-fragment-length-polymorphism (RFLP) analysis. With the exception of 14 individuals belonging to the European-specific haplogroups R2, H, J, and T, the mtDNAs considered could be assigned into the East Asian-specific haplogroups described recently. The polymorphisms in cytochrome b sequence were found to be very informative for defining or supporting the haplogroups status of East Asian mtDNAs in addition to the reported regions 10171-10659 and 14055-14590 in our previous study. The haplogroup distribution frequencies varied in the five ethnic populations, but in general they all harbored a large amount of north-prevalent haplogroups, such as D, G, C, and Z, and thus were in agreement with their ethnohistory of northern origin. The two populations (Ewenki and Oroqen) with small population census also show concordant features in their matrilineal genetic structures, with lower genetic diversities observed.

Chemical control of psychrophilic bacterial spoilage of fish 1. Isolation and identification of psychrophilic bacteria from marine fish

Making use of the streak plate technique and low temperature incubation, 28 cultures belonging to six genera namely, Achromobacter, Flavobacterium, Pseudomonas, Micrococcus, Vibrio and Alcaligenes were isolated from different varieties of marine fish. The growth studies indicated that all of them were able to grow between -5 and +5°C within a week's time and none of them showed growth at 37°C. The optimum temperature of growth for all these cultures was in the range 25-28°C. Among these only one, i.e., a Vibrio sp., was found to be an obligate psychrophile.

Genetic diversity and relationship of Yunnan native cattle breeds and introduced beef cattle breeds

In this study, random amplified polymorphic DNA (RAPD) analysis was used to estimate genetic diversity and relationship in 134 samples belonging to two native cattle breeds from the Yunnan province of China (DeHong cattle and DiQing cattle) and four intro

Mitochondrial diversity and phylogeographic structure of Chinese domestic goats

China has numerous native domestic goat breeds, but so far there has been no extensive study on genetic diversity, population demographic history, and origin of Chinese goats. Here, we examined the genetic diversity and phylogeographic structure of Chinese domestic goats by determining a 481-bp fragment of the first hypervariable region of mitochondrial DNA (mtDNA) control region from 368 individuals representing 18 indigenous breeds. Phylogenetic analyses revealed that there were four mtDNA lineages (A-D) identified in Chinese goats, in which lineage A was predominant, lineage B was moderate, and lineages C and D were at low frequency. These results further support the multiple maternal origins of domestic goats. The pattern of genetic variation in goat mtDNA sequences indicated that the two larger lineages A and B had undergone population expansion events. In a combined analysis of previously reported sequences and our sequences belonging to lineage B, we detected two subclades, in which one was unique to eastern Asia and another was shared between eastern and southern Asia. A larger genetic variation in eastern Asia than southern Asia and the pattern of phylogeographic variation in lineage B suggest that at least one subclade of lineage B originated from eastern Asia. There was no significant geographical structuring in Chinese goat populations, which suggested that there existed strong gene flow among goat populations caused by extensive transportation of goats in history. (c) 2005 Elsevier Inc. All rights reserved.