Viruses and viral proteins

For more than 30 years X-ray crystallography has been by far the most powerful approach for determining the structures of viruses and viral proteins at atomic resolution. The information provided by these structures, which covers many important aspects of the viral life cycle such as cell-receptor recognition, viral entry, nucleic acid transfer and genome replication, has extensively enriched our vision of the virus world. Many of the structures available correspond to potential targets for antiviral drugs against important human pathogens. This article provides an overview of the current knowledge of different structural aspects of the above-mentioned processes.

Dynamic response of a piezoelectric flapping wing

Piezo-composite membranes have advantages over motorized flapping where frequencies are high and certain coupling between bending and twisting is useful to generate lift and forward flight. We draw examples of fruit fly and bumble bee. Wings with Piezo ceramic PZT coating are realized. The passive mechanical response of the wing is characterized experimentally and validated using finite element simulation. Piezoelectric actuation with uniform electrode coating is characterized and optimal frequencies for flapping are identified. The experimental data are used in an empirical model and advanced ratio for a flapping insect like condition for various angular orientations is estimated.

Multiobjective Optimization of Piezoelectric Bimorph Actuator with Rigid Extension

Production of high tip deflection in a piezoelectric bimorph laminar actuator by applying high voltage is limited by many physical constraints. Therefore, piezoelectric bimorph actuator with a rigid extension of non-piezoelectric material at its tip is used to increase the tip deflection of such an actuator. Research on this type of piezoelectric bending actuator is either limited to first order constitutive relations, which do not include non-linear behavior of piezoelectric element at high electric field, or limited to curve fitting techniques. Therefore, this paper considers high electric field, and analytically models tapered piezoelectric bimorph actuator with a rigid extension of non-piezoelectric material at its tip. The stiffness, capacitance, effective tip deflection, block force, output strain energy, output energy density, input electrical energy and energy efficiency of the actuator are calculated analytically. The paper also discusses the multi-objective optimization of this type of actuator subjected to the mechanical and electrical constraints.

Laboratory-frame observables for probing the top-Higgs boson interaction

We investigate methods to explore the CP nature of the t (t) over barh coupling at the LHC, focusing on associated production of the Higgs boson with a t (t) over bar pair. We first discuss the constraints implied by low-energy observables and by the Higgs-rate information from available LHC data, emphasizing that they cannot provide conclusive evidence on the nature of this coupling. We then investigate kinematic observables that could probe the t (t) over barh coupling directly, in particular, quantities that can be constructed out of just laboratory-frame kinematics. We define one such observable by exploiting the fact that t (t) over bar spin correlations do also carry information about the CP nature of the t (t) over barh coupling. Finally, we introduce a CP-odd quantity and a related asymmetry, able to probe CP violation in the t (t) over barh coupling and likewise, constructed out of laboratory-frame momenta only.

EFFECT OF PLUME DYNAMICS FOR HEAT TRANSFER ENHANCEMENT AT SOLID-LIQUID INTERFACE

The present paper analyzes the effects of plumes for heat transfer enhancement at solid-liquid interface taking both smooth and grooved surfaces. The experimental setup consists of a tank of dimensions 265 x 265 x 300 (height) containing water. The bottom surface was heated and free surface of the water was left open to the ambient. In the experiments, the bottom plate had either a smooth surface or a grooved surface. We used 90 V-grooved rough surfaces with two groove heights, 10mm and 3mm. The experiment was done with water layer depths of 90mm and 140mm, corresponding to values of aspect ratio(AR) equal to 2.9 and 1.8 respectively. Thymol blue, a pH sensitive dye, was used to visualize the flow near the heated plate. The measured heat transfer coefficients over the grooved surfaces were higher compared that over the smooth surface. The enhanced heat transport in the rough cavities cannot be ascribed to the increase in the contact area, rather it must be the local dynamics of the thermal boundary layer that changes the heat transport over the rough surface.

THE EFFECTS OF SURFACTANT ON SIMPLEX NOZZLE SPRAY BEHAVIOR AND ITS COMPARISON TO LIQUID FUELS

Pressure-swirl nozzles (simplex nozzles) are used in various field applications such as aero-engines, power generation, spray painting and agricultural irrigation. For this particular nozzle, research in the past decade has dealt with the development of numerical models for predicting droplet distribution profiles. Although these results have been valuable, the experimental results have been contradictory, therefore fundamental understanding of the influence of properties in nozzle is important. This paper experimentally investigates the effect of surfactants on breakup and coalescence. Since most of the fuels and biofuels have low surface tension compared to water, a comparative analysis between a surfactant solution and a liquid fuel is imperative. For this experimental study, a simplex nozzle characterized as flow number 0.4 will be utilized. The injection pressures will range from 0.3 - 4Mpa while altering the surface tension from 72 to 28mN/m. By applying Phase Doppler Particle Anemometry (PDPA) which is a non-intrusive laser diagnostic technique, the differences in spray characteristics due to spray surface tension can be highlighted. The average droplet diameter decreases for a low surface tension fluid in the axial direction in comparison to pure water. The average velocity of droplets is surprisingly lower in the same spray zone. Measurements made in the radial direction show no significant changes, but at the locations close to the nozzle, water droplets have larger diameter and velocity. The results indicate the breakup and coalescence regimes have been altered when surface tension is lowered. A decrease in surface tension alters the breakup length while increasing the spray angle. Moreover, higher injection pressure shortens the breakup length and decrease in overall diameter of the droplets. By performing this experimental study the fundamentals of spray dynamics, such as spray formation, liquid breakup length, and droplet breakup regimes can be observed as a function of surface tension and how a surrogate fuel compares with a real fuel for experimental purposes. This knowledge potentially will lead to designing a better atomizer or new biofuels.

Ray tracing based path-length calculations for polarized light tomographic imaging

A ray tracing based path length calculation is investigated for polarized light transport in a pixel space. Tomographic imaging using polarized light transport is promising for applications in optical projection tomography of small animal imaging and turbid media with low scattering. Polarized light transport through a medium can have complex effects due to interactions such as optical rotation of linearly polarized light, birefringence, diattenuation and interior refraction. Here we investigate the effects of refraction of polarized light in a non-scattering medium. This step is used to obtain the initial absorption estimate. This estimate can be used as prior in Monte Carlo (MC) program that simulates the transport of polarized light through a scattering medium to assist in faster convergence of the final estimate. The reflectance for p-polarized (parallel) and s-polarized (perpendicular) are different and hence there is a difference in the intensities that reach the detector end. The algorithm computes the length of the ray in each pixel along the refracted path and this is used to build the weight matrix. This weight matrix with corrected ray path length and the resultant intensity reaching the detector for each ray is used in the algebraic reconstruction (ART) method. The proposed method is tested with numerical phantoms for various noise levels. The refraction errors due to regions of different refractive index are discussed, the difference in intensities with polarization is considered. The improvements in reconstruction using the correction so applied is presented. This is achieved by tracking the path of the ray as well as the intensity of the ray as it traverses through the medium.

COST AND PERFORMANCE TRADEOFFS OF ALTERNATIVE SOLAR-DRIVEN S-CO2 BRAYTON CYCLE CONFIGURATIONS

This paper evaluates cost and performance tradeoffs of alternative supercritical carbon dioxide (s-CO2) closed-loop Brayton cycle configurations with a concentrated solar heat source. Alternative s-CO2 power cycle configurations include simple, recompression, cascaded, and partial cooling cycles. Results show that the simple closed-loop Brayton cycle yielded the lowest power-block component costs while allowing variable temperature differentials across the s-CO2 heating source, depending on the level of recuperation. Lower temperature differentials led to higher sensible storage costs, but cycle configurations with lower temperature differentials (higher recuperation) yielded higher cycle efficiencies and lower solar collector and receiver costs. The cycles with higher efficiencies (simple recuperated, recompression, and partial cooling) yielded the lowest overall solar and power-block component costs for a prescribed power output.

DESIGN REQUIREMENTS FOR DIRECT SUPERCRITICAL CARBON DIOXIDE RECEIVER DEVELOPMENT AND TESTING

This paper establishes the design requirements for the development and testing of direct supercritical carbon dioxide (sCO2) solar receivers. Current design considerations are based on the ASME Boiler and Pressure Vessel Code (BPVC). Section I (BPVC) considers typical boilers/superheaters (i.e. fired pressure vessels) which work under a constant low heat flux. Section VIII (BPVC) considers pressure vessels with operating pressures above 15 psig 2 bar] (i.e. unfired pressure vessels). Section III, Division I - Subsection NH (BPVC) considers a more detailed stress calculation, compared to Section I and Section VIII, and requires a creep-fatigue analysis. The main drawback from using the BPVC exclusively is the large safety requirements developed for nuclear power applications. As a result, a new set of requirements is needed to perform detailed thermal-structural analyses of solar thermal receivers subjected to a spatially-varying, high-intensity heat flux. The last design requirements document of this kind was an interim Sandia report developed in 1979 (SAND79-8183), but it only addresses some of the technical challenges in early-stage steam and molten-salt solar receivers but not the use of sCO2 receivers. This paper presents a combination of the ASME BPVC and ASME B31.1 Code modified appropriately to achieve the reliability requirements in sCO(2) solar power systems. There are five main categories in this requirements document: Operation and Safety, Materials and Manufacturing, Instrumentation, Maintenance and Environmental, and General requirements. This paper also includes the modeling guidelines and input parameters required in computational fluid dynamics and structural analyses utilizing ANSYS Fluent, ANSYS Mechanical, and nCode Design Life. The main purpose of this document is to serve as a reference and guideline for design and testing requirements, as well as to address the technical challenges and provide initial parameters for the computational models that will be employed for the development of sCO(2) receivers.

COUPLED OPTICAL-THERMAL-FLUID MODELING OF A DIRECTLY HEATED TUBULAR SOLAR RECEIVER FOR SUPERCRITICAL CO2 BRAYTON CYCLE

Recent studies have evaluated closed-loop supercritical carbon dioxide (s-CO2) Brayton cycles to be a higher energy density system in comparison to conventional superheated steam Rankine systems. At turbine inlet conditions of 923K and 25 MPa, high thermal efficiency (similar to 50%) can be achieved. Achieving these high efficiencies will make concentrating solar power (CSP) technologies a competitive alternative to current power generation methods. To incorporate a s-CO2 Brayton power cycle in a solar power tower system, the development of a solar receiver capable of providing an outlet temperature of 923 K (at 25 MPa) is necessary. The s-CO2 will need to increase in temperature by similar to 200 K as it passes through the solar receiver to satisfy the temperature requirements of a s-CO2 Brayton cycle with recuperation and recompression. In this study, an optical-thermal-fluid model was developed to design and evaluate a tubular receiver that will receive a heat input similar to 2 MWth from a heliostat field. The ray-tracing tool SolTrace was used to obtain the heat-flux distribution on the surfaces of the receiver. Computational fluid dynamics (CFD) modeling using the Discrete Ordinates (DO) radiation model was used to predict the temperature distribution and the resulting receiver efficiency. The effect of flow parameters, receiver geometry and radiation absorption by s-CO2 were studied. The receiver surface temperatures were found to be within the safe operational limit while exhibiting a receiver efficiency of similar to 85%.

Estructura, diversidad florística y estimación de carbono almacenado en tres bosques del municipio El Castillo, Río San Juan, Nicaragua, 2012

La planificación y manejo integral de fincas es un mod elo con tendencias productivas, en Nicaragua la ausencia de metodologías sencillas, flexibles, con alta factibilidad económica y confiabilidad de los resultados, es un factor determinante de la aceptación e implementación de los planes de manejo a nivel de finca. El presente estudio se realizó con la finalidad de contribuir información de metodología para inventarios forestales y resultados florísticos en el almacenamiento de carbono, en tres fincas productivas del bosque húmedo tropical del municipio El Castillo, Río San Juan. El estudio se estableció en tres etapas metodológicas: planificación de trabajo, fase de campo y almacenamiento de datos (procesamiento). Para cumplir los objetivos se implementó un inventario forestal por muestreo sistemático con diferentes intensidades de muestreo en cada finca, se establecieron parcelas de 10m x 50m (0.05 ha), para comparar la diversidad entre fincas se utilizó igual tamaño de parcelas (0.3 ha), mediante el índice de Margalef (riqueza) e índice de Shannon-Weiner (equidad), se analizó la estructura horizontal mediante el cálculo de abundancia, área basal y volumen por hectárea, para la estimación de carbono se optó por el método no destructivo utilizando la ecuación general de biomasa (Brown, 1997) y el factor de carbono según IPCC, 2005. Las variables estudiadas son: nombre botánico de la especie arbórea, DAP (1.30m sobre el suelo ) mayor a 10 cm y altura fustal. Se identificaron 31 familias botánicos, 57 géneros y 68 especies, las familias más representativas, según el número de especie son, Moraceae, Rubiaceae, Fabaceae, Sapotaceae, Anonaceae, Burseraceae, Cumbretaceae, Lauraceae, Meliaceae, Vochysiaceae, Mimosaceae, alta presencia de especies indicadoras de bosques alterados o secundarios y bajo número de especies comerciales. No obstante el estudio de muestra alta riqueza en las tres fincas sin diferencias significativas (X²= 0,916; P>0,05) y baja equidad en La Pavona y La Perilla, por el contrario La Primavera presenta mejor representatividad de las especies. El bosque con mayor área basal y volumen (desarrollo estructural), fue La Pavona (26.51 m2ha-1 y 365.39 m3 ha-1), también almacenó mayor carbono por hectárea (195.66Mg C ha-1), básicamente los resultado de carbono son similares entre las tres fincas (La Perilla con 184.38 MgC ha-1 y La Primavera con 192.21 MgC ha-1), también se encontró alta relación entre el estado de desarrollo (clases naturales de edades), abundancia, volumen y el almacenamiento de carbono por la alta cantidad de biomasa.

Degradación in vivo de la materia seca y materia orgánica del Teocinte (Zea nicaraguensis Iltis y Benz)

Este estudio se realizó con el objetivo de determinar la degradabilidad in vivo del Teocinte (Zea nicaraguensis Iltis & Benz). El ensayo de degradabilidad fue realizado en la galera experimental de la Facultad de Ciencia Animal adscrita a la Universidad Nacional Agraria. En este ensayo se utilizaron dos vacas de raza Reyna, secas y vacías, con fistulas ruminales. Los tiempos de incubación (0, 0.5, 1, 3, 6, 9, 12, 24, 48, 72, 96 horas) fueron considerados los tratamientos (11) por 4 réplicas por cada tiempo. Las variables evaluadas fueron: degradación de materia seca (DMS) y degradación de materia orgánica (DMO). Para la determinación de las variables, se utilizó el modelo exponencial descrito por Orskov and McDonald (1979). Como resultados finales de la Degradabilidad de la MS se obtuvo una fracción soluble de 2.44% (a), fracción insoluble pero potencialmente degradable del 23.35% (b), una tasa de degradación de la fracción potencialmente degradada estimada del 2.61%* horas (c) y la fracción no degradable [100-(2.44 + 23.35)] del 74.05%. En la Degradabilidad de la MO la fracción soluble fue de 2.43% (a), la fracción insoluble pero potencialmente degradable de 23.35% (b), una tasa de degradación de la fracción potencialmente degradada estimada de 2.61%* horas y la fracción no degradable [100-(2.43 + 23.35)] de 74.22%. El Teocinte en la edad de corte utilizada en este experimento no tiene valores de degradabilidad compatibles con sistemas de producción animal de alta intensidad por lo que se sugiere seguir investigando en su potencialidad.

波浪欣沙的动力学机理分析

本文从床面附近泥沙颗粒的运动特征出发，详细分析波作用下床面泥沙扬起的动力学机制，得到了波浪欣沙计算公式，计算结果与实测资料相吻合、研究表明淤泥质第岸泥沙颗粒的稳定性主要受制于颗粒间的粘结力和薄膜水压力，重力作用居于次要地位，因此泥沙颗粒越细越难以起悬。

Efecto de métodos mecánicos y químicos de control de malezas, sobre la dinámica de las malezas y el crecimiento y rendimiento del frijol común (Phaseolus vulgaris) valoración económica

Durante la época de postrera de 1993, se realizó el siguiente estudio en la finca "San Diego" ubicada en el municipio de Santa Cruz, km. 59 1/2, carretera sur, Carazo. El objetivo fue determinar el efecto de formas de control de malezas mecánicas y químicas sobre la dinámica de las malezas y el crecimiento y rendimiento de frijol común. Los tratamiento con control mecánico evaluados fueron limpia periódica y control durante el período crítico y los tratamiento químicos incluyeron tratamiento pre-emergentes a base de metholachlor, pendimetalin y la combinación de ambos, y los tratamientos post-emergentes a base de Fluazifop-hutil, fomesafen y el tratamiento que incluye la combinación de ambos. Todos los herbicidas se aplicaron en la dosis recomendada comercialmente. Un tratamiento fue dejado enmalezado como parcela control. Los resultados obtenidos muestran que la predominancia de las malezas en el tratamiento enmalezado fue de hoja ancha, sin embargo dicha predominancia estuvo influenciada por la especificidad de los herbicidas utilizados. La combinación de los herbicidas post-emergentes fluazifop-butil + fomesafen resulto ser el mejor tratamiento para el control de las malezas, ya que presenta la menor abundancia y biomasa de malezas. La aplicación del herbicida metholachlor resulto la mejor aplicación pre-emergente, sin embargo no es suficiente para reducir la competencia. El tratamiento de mejor rentabilidad es el control durante el período crítico, seguido del tratamiento post-emergente de fomesafen, con estos tratamientos se obtuvo la tasa de retorno marginal más aceptable.

Incremento de la productividad de frijol (Phaseolus vulgaris L.) a nivel de finca mediante la inoculación con Rhizobium leguminosarum bv. phaseoli

El efecto de una mezcla de tres cepas de Rhizobium leguminosarum biovar phaseoll (CIAT-613, CR-477 y KIM-5) relacionado con los factores limitantes del suelo (P, Ca, Cu, y Zn) sobre la simbiosis en tres variedades de Phaseolus vulgaris L. (DOR-364, ESTELI-90B y FIEVOLUCION-84) fue estudiado en un suelo Molisol y un Aluvial en las localidades de San Diego (Nandaime) y San Lorenzo (La Trinidad, Estelí), respectivamente, bajo condiciones de labranza convencional para ambas localidades. En la localidad de San Lorenzo se trabajó con las variedades DOR-364 y EST-908 con la corrección del cobre (factor A) y el zinc (factor 8), mientras que en la localidad de San Diego, el trabajo se realizó con las variedades DOR-364 y REVOLUCION-84 y la corrección del calcio (factor A) y el fósforo (factor 8), Ambos estudios se llevaron a cabo en época de postrera de 1994. En los dos ensayos la inoculación se hizo directamente a la semilla. Los tratamientos a evaluar fueron los siguientes: Alto nitrógeno, bajo nitrógeno como testigos (sin inocular), mezcla de inoculantes con (-A,-B), (+A,-B), (-A,+B), y (+A,+B) para un total de seis tratamientos por cada variedad. El diseño usado fue de bloques completos al azar (B.C.A). Las variables evaluadas fueron: Número y peso seco de nódulos, peso de materia seca de la planta en R6, peso de mil granos y rendimiento de grano en R9. Los datos se procesaron usando análisis de varianza (ANDEVA) y se utilizó la prueba de rangos múltiples de DUNCAN (P ≤ 0,05). Se observó a nivel general en ambos experimentos que la variedad introducida mostró un mayor rendimiento y que el mejor rendimiento de grano se obtuvo con el tratamiento en el que se usó alta dosis de nitrógeno y sin inocular. Por otro lado el rendimiento de frijol fue afectado negativamente por las aplicaciones de zinc en el caso del experimento en San Lorenzo. Para la localidad de San Diego se obtuvo respuesta positiva a las aplicaciones de fósforo junto con la mezcla de inoculantes usados. En los dos experimentos no se encontró respuesta significativa con el uso de la mezcla de inoculantes relacionados con los elementos limitantes del suelo comparado con los testigos.